Trypanosome RNA editing: simple guide RNA features enhance U deletion 100-fold.

scientific article published on February 2001

Trypanosome RNA editing: simple guide RNA features enhance U deletion 100-fold. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1128/MCB.21.3.884-892.2001
P8608Fatcat IDrelease_ffqdvhmurndglomekncomkmmyu
P932PMC publication ID86679
P698PubMed publication ID11154275
P5875ResearchGate publication ID12175839

P50authorJorge Cruz-ReyesQ57730274
P2093author name stringB Sollner-Webb
L Rusche
A Zhelonkina
P2860cites workThe mechanism of U insertion/deletion RNA editing in kinetoplastid mitochondriaQ24545284
RNA editing: getting U into RNAQ28239897
A model for RNA editing in kinetoplastid mitochondria: "guide" RNA molecules transcribed from maxicircle DNA provide the edited informationQ28255689
Mechanism and evolution of RNA editing in kinetoplastidaQ28280734
RNA editing: world's smallest introns?Q30449655
Association of guide RNA binding protein gBP21 with active RNA editing complexes in Trypanosoma bruceiQ33780973
Kinetoplastid RNA-editing-associated protein 1 (REAP-1): a novel editing complex protein with repetitive domains.Q33889874
In vitro uridine insertion RNA editing mediated by cis-acting guide RNAsQ34361872
Kinetoplastid RNA editing does not require the terminal 3' hydroxyl of guide RNA, but modifications to the guide RNA terminus can inhibit in vitro U insertionQ34361968
RNA editing in kinetoplastid protozoaQ36574222
Trypanosome U-deletional RNA editing involves guide RNA-directed endonuclease cleavage, terminal U exonuclease, and RNA ligase activitiesQ37376878
Identification by UV cross-linking of oligo(U)-binding proteins in mitochondria of the insect trypanosomatid Crithidia fasciculataQ38299018
RNA-binding properties of the mitochondrial Y-box protein RBP16.Q38315652
Trypanosoma brucei guide RNA poly(U) tail formation is stabilized by cognate mRNA.Q39450743
Uridylate addition and RNA ligation contribute to the specificity of kinetoplastid insertion RNA editingQ39540061
A three-dimensional working model for a guide RNA from Trypanosoma bruceiQ39720238
Trypanosoma brucei U insertion and U deletion activities co-purify with an enzymatic editing complex but are differentially optimized.Q39724699
The involvement of gRNA-binding protein gBP21 in RNA editing-an in vitro and in vivo analysisQ39727472
The secondary structure of guide RNA molecules fromTrypanosoma bruceiQ40395349
Different Trypanosoma brucei guide RNA molecules associate with an identical complement of mitochondrial proteins in vitroQ40399963
Guide RNA-directed uridine insertion RNA editing in vitroQ41078882
Trypanosome RNA editing: resolvedQ41095928
A guide to RNA editing.Q41608691
Resolution of the RNA editing gRNA-directed endonuclease from two other endonucleases of Trypanosoma brucei mitochondria.Q41895616
Guide RNAs in kinetoplastid mitochondria have a nonencoded 3′ oligo(U) tail involved in recognition of the preedited regionQ41941621
Purification of a functional enzymatic editing complex from Trypanosoma brucei mitochondriaQ42623988
Trypanosoma brucei gBP21. An arginine-rich mitochondrial protein that binds to guide RNA with high affinityQ42648911
Site-specific modification of pre-mRNA: the 2'-hydroxyl groups at the splice sitesQ43506774
Chimeric gRNA-mRNA molecules with oligo(U) tails covalently linked at sites of RNA editing suggest that U addition occurs by transesterificationQ46111266
Trypanosoma brucei TBRGG1, a mitochondrial oligo(U)-binding protein that co-localizes with an in vitro RNA editing activityQ47682066
T. brucei RNA editing: adenosine nucleotides inversely affect U-deletion and U-insertion reactions at mRNA cleavageQ47858606
RNA editing: a mechanism for gRNA-specified uridylate insertion into precursor mRNA.Q54649086
Direct visualization of uridylate deletion in vitro suggests a mechanism for kinetoplastid RNA editingQ71000760
RNA Editing: Transfer of Genetic Information from gRNA to Precursor mRNA in VitroQ71653038
Defining the editing 'reaction'Q73049585
Unexpected electrophoretic migration of RNA with different 3' termini causes a RNA sizing ambiguity that can be resolved using nuclease P1-generated sequencing laddersQ74477697
P433issue3
P407language of work or nameEnglishQ1860
P304page(s)884-892
P577publication date2001-02-01
P1433published inMolecular and Cellular BiologyQ3319478
P1476titleTrypanosome RNA editing: simple guide RNA features enhance U deletion 100-fold
P478volume21

Reverse relations

cites work (P2860)
Q34364399A hammerhead ribozyme substrate and reporter for in vitro kinetoplastid RNA editing
Q39788596A high-order trans-membrane structural linkage is responsible for mitochondrial genome positioning and segregation by flagellar basal bodies in trypanosomes
Q39094529A mRNA determinant of gRNA-directed kinetoplastid editing
Q34133273An essential RNase III insertion editing endonuclease in Trypanosoma brucei.
Q42851304An essential role of KREPB4 in RNA editing and structural integrity of the editosome in Trypanosoma brucei.
Q34278417Assembly and function of the RNA editing complex in Trypanosoma brucei requires band III protein
Q44610057Cis-acting Elements Stimulating Kinetoplastid Guide RNA-directed Editing
Q34365769Complete cycles of bloodstream trypanosome RNA editing in vitro
Q42040628Compositionally and functionally distinct editosomes in Trypanosoma brucei
Q41149338Determinants for association and guide RNA-directed endonuclease cleavage by purified RNA editing complexes from Trypanosoma brucei.
Q74292694Direct visualisation of RNA editing within a Leishmania tarentolae mitochondrial extract
Q39674967Distinct functions of two RNA ligases in active Trypanosoma brucei RNA editing complexes.
Q57752787Dynamic RNA holo-editosomes with subcomplex variants: Insights into the control of trypanosome editing
Q39774520Dyskinetoplastic Trypanosoma brucei contains functional editing complexes
Q36156151Editosome accessory factors KREPB9 and KREPB10 in Trypanosoma brucei
Q37388514Evidence for U-tail stabilization of gRNA/mRNA interactions in kinetoplastid RNA editing
Q42124628In Trypanosoma brucei RNA editing, TbMP18 (band VII) is critical for editosome integrity and for both insertional and deletional cleavages.
Q40446650In Trypanosoma brucei RNA editing, band II enables recognition specifically at each step of the U insertion cycle
Q48182613In vitro recapitulation of the site-specific editing (to wild-type) of mutant IDS mRNA transcripts, and the characterization of IDS protein translated from the edited mRNAs
Q41876511Interactions of mRNAs and gRNAs involved in trypanosome mitochondrial RNA editing: structure probing of a gRNA bound to its cognate mRNA.
Q34206225KREX2 is not essential for either procyclic or bloodstream form Trypanosoma brucei.
Q90459807Lexis and Grammar of Mitochondrial RNA Processing in Trypanosomes
Q24814541Minimal pre-mRNA substrates with natural and converted sites for full-round U insertion and U deletion RNA editing in trypanosomes.
Q27027472Mitochondrial RNA editing in trypanosomes: small RNAs in control
Q34365521Mitochondrial proteins and complexes in Leishmania and Trypanosoma involved in U-insertion/deletion RNA editing
Q36246636Mutational analysis of Trypanosoma brucei editosome proteins KREPB4 and KREPB5 reveals domains critical for function.
Q35557665Native Variants of the MRB1 Complex Exhibit Specialized Functions in Kinetoplastid RNA Editing
Q33967980Native mitochondrial RNA-binding complexes in kinetoplastid RNA editing differ in guide RNA composition
Q34702943RBP16 stimulates trypanosome RNA editing in vitro at an early step in the editing reaction.
Q34702837RNA editing complex interactions with a site for full-round U deletion in Trypanosoma brucei
Q41866692RNA editing in Trypanosoma brucei requires three different editosomes
Q38335032RNA interference analyses suggest a transcript-specific regulatory role for mitochondrial RNA-binding proteins MRP1 and MRP2 in RNA editing and other RNA processing in Trypanosoma brucei
Q39677689RNA sequence and base pairing effects on insertion editing in Trypanosoma brucei
Q80700168RNA-protein interactions in assembled editing complexes in trypanosomes
Q35080361Reconstitution of full-round uridine-deletion RNA editing with three recombinant proteins
Q34286622Reducing ligation bias of small RNAs in libraries for next generation sequencing
Q74584561Ribonuclease activities of trypanosome RNA editing complex directed to cleave specifically at a chosen site
Q39618738Role of uridylate-specific exoribonuclease activity in Trypanosoma brucei RNA editing
Q28348370Roles for ligases in the RNA editing complex of Trypanosoma brucei: band IV is needed for U-deletion and RNA repair.
Q34365061Sequence and structural requirements for optimal guide RNA-directed insertional editing within Leishmania tarentolae
Q53583889Substrate determinants for RNA editing and editing complex interactions at a site for full-round U insertion.
Q43226651T. brucei RNA editing: action of the U-insertional TUTase within a U-deletion cycle.
Q35095914TbMP44 is essential for RNA editing and structural integrity of the editosome in Trypanosoma brucei
Q34366165The 3'-untranslated region of cytochrome oxidase II mRNA functions in RNA editing of African trypanosomes exclusively as a cis guide RNA.
Q38287368The KREPA3 zinc finger motifs and OB-fold domain are essential for RNA editing and survival of Trypanosoma brucei
Q28344644The specificity of nucleotide removal during RNA editing in Trypanosoma brucei
Q36909653Trypanosoma brucei ATPase subunit 6 mRNA bound to gA6-14 forms a conserved three-helical structure
Q39940448Trypanosoma brucei RNA editing complex: band II is structurally critical and maintains band V ligase, which is nonessential
Q43077446Trypanosoma brucei RNA editing: coupled cycles of U deletion reveal processive activity of the editing complex.
Q36282126Unexplained complexity of the mitochondrial genome and transcriptome in kinetoplastid flagellates
Q35068202Uridine insertion/deletion RNA editing in trypanosome mitochondria: a complex business
Q80700157Uridine insertion/deletion editing activities
Q35158070Uridine insertion/deletion editing in trypanosomes: a playground for RNA-guided information transfer

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