A ubiquitin-binding domain in Cockayne syndrome B required for transcription-coupled nucleotide excision repair

scientific article published on June 2010

A ubiquitin-binding domain in Cockayne syndrome B required for transcription-coupled nucleotide excision repair is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1016/J.MOLCEL.2010.04.017
P932PMC publication ID2885502
P698PubMed publication ID20541997
P5875ResearchGate publication ID44667375

P50authorJesper Qualmann SvejstrupQ21165512
Giuseppina Giglia-MariQ30003429
P2093author name stringWim Vermeulen
Leon H Mullenders
Maria Fousteri
Hanneke Kool
Jean-Marc Egly
Roy Anindya
Pierre-Olivier Mari
Ulrik Kristensen
P2860cites workDynamic interaction of TTDA with TFIIH is stabilized by nucleotide excision repair in living cellsQ21146056
Cockayne syndrome A and B proteins differentially regulate recruitment of chromatin remodeling and repair factors to stalled RNA polymerase II in vivoQ24300037
Damage-induced ubiquitylation of human RNA polymerase II by the ubiquitin ligase Nedd4, but not Cockayne syndrome proteins or BRCA1Q24300146
The ubiquitin ligase activity in the DDB2 and CSA complexes is differentially regulated by the COP9 signalosome in response to DNA damageQ24301297
CSA-dependent degradation of CSB by the ubiquitin-proteasome pathway establishes a link between complementation factors of the Cockayne syndromeQ24338620
Ubiquitin-associated (UBA) domains in Rad23 bind ubiquitin and promote inhibition of multi-ubiquitin chain assemblyQ24522596
DNA damage triggers nucleotide excision repair-dependent monoubiquitylation of histone H2AQ24546161
Recruitment of the putative transcription-repair coupling factor CSB/ERCC6 to RNA polymerase II elongation complexesQ24644162
Dynamic assembly of end-joining complexes requires interaction between Ku70/80 and XRCC4Q24675041
Impaired nucleotide excision repair upon macrophage differentiation is corrected by E1 ubiquitin-activating enzymeQ24680091
Mechanism of ubiquitin recognition by the CUE domain of Vps9pQ27641385
Solution structure of a CUE-ubiquitin complex reveals a conserved mode of ubiquitin bindingQ27641386
Molecular cloning and characterization of Saccharomyces cerevisiae RAD28, the yeast homolog of the human Cockayne syndrome A (CSA) geneQ27936483
Non-traditional functions of ubiquitin and ubiquitin-binding proteinsQ28187368
ERCC6, a member of a subfamily of putative helicases, is involved in Cockayne's syndrome and preferential repair of active genesQ28213725
Histone H3 and H4 ubiquitylation by the CUL4-DDB-ROC1 ubiquitin ligase facilitates cellular response to DNA damageQ28238604
Cockayne syndrome group B protein (CSB) plays a general role in chromatin maintenance and remodelingQ28245824
Enhanced genome annotation using structural profiles in the program 3D-PSSMQ29547847
Transcription-coupled DNA repair: two decades of progress and surprisesQ29614662
Ubiquitin-binding domainsQ29616461
Ubiquitin-binding domains in Y-family polymerases regulate translesion synthesisQ29619757
Selective removal of transcription-blocking DNA damage from the transcribed strand of the mammalian DHFR geneQ30054509
Chromatin restoration following nucleotide excision repair involves the incorporation of ubiquitinated H2A at damaged genomic sitesQ30854865
Xeroderma pigmentosum group A protein loads as a separate factor onto DNA lesionsQ30974742
Anti-tumour compounds illudin S and Irofulven induce DNA lesions ignored by global repair and exclusively processed by transcription- and replication-coupled repair pathways.Q31126129
DNA repair-deficient diseases, xeroderma pigmentosum, Cockayne syndrome and trichothiodystrophyQ33196842
DNA damage stabilizes interaction of CSB with the transcription elongation machineryQ33204356
Initiation of DNA repair mediated by a stalled RNA polymerase IIO.Q33231453
Activation of multiple DNA repair pathways by sub-nuclear damage induction methodsQ33291497
Ubiquitin-binding domains and their role in the DNA damage responseQ33346733
The genetic defect in Cockayne syndrome is associated with a defect in repair of UV-induced DNA damage in transcriptionally active DNA.Q33640104
The Cockayne syndrome B protein, involved in transcription-coupled DNA repair, resides in an RNA polymerase II-containing complexQ33887586
Cockayne syndrome group B cellular and biochemical functionsQ33905274
Deficient repair of the transcribed strand of active genes in Cockayne's syndrome cellsQ34348395
Mechanisms of transcription-coupled DNA repairQ34514438
Cockayne syndrome B protein regulates the transcriptional program after UV irradiationQ34590427
Clonogenic assay of cells in vitro.Q34615431
Nucleotide excision repair-induced H2A ubiquitination is dependent on MDC1 and RNF8 and reveals a universal DNA damage responseQ35006034
Rescue of arrested RNA polymerase II complexesQ35036829
DNA damage recognition and nucleotide excision repair in mammalian cells.Q35132504
When transcription and repair meet: a complex systemQ36517499
Histone ubiquitylation and the regulation of transcriptionQ36566101
UV-induced inhibition of transcription involves repression of transcription initiation and phosphorylation of RNA polymerase II.Q37249463
Regulating post-translational modifications of the eukaryotic replication clamp PCNA.Q37393403
Biochemical and biological characterization of wild-type and ATPase-deficient Cockayne syndrome B repair protein.Q38336695
Recruitment of the nucleotide excision repair endonuclease XPG to sites of UV-induced dna damage depends on functional TFIIH.Q39127506
ATP-dependent chromatin remodeling by the Cockayne syndrome B DNA repair-transcription-coupling factor.Q39455992
In vivo assays for transcription-coupled repair.Q40263802
A temperature-sensitive disorder in basal transcription and DNA repair in humansQ40606632
Efficient immortalization and morphological transformation of human fibroblasts by transfection with SV40 DNA linked to a dominant markerQ42819252
Structural determinants for selective recognition of a Lys48-linked polyubiquitin chain by a UBA domainQ46539684
Failure of RNA synthesis to recover after UV irradiation: an early defect in cells from individuals with Cockayne's syndrome and xeroderma pigmentosumQ72658941
P433issue5
P921main subjectCockayne syndromeQ914389
P304page(s)637-648
P577publication date2010-06-01
P1433published inMolecular CellQ3319468
P1476titleA ubiquitin-binding domain in Cockayne syndrome B required for transcription-coupled nucleotide excision repair
P478volume38

Reverse relations

cites work (P2860)
Q47134453A case-control study on association of nucleotide excision repair polymorphisms and its interaction with environment factors with the susceptibility to non-melanoma skin cancer
Q30513299A community-based study of nucleotide excision repair polymorphisms in relation to the risk of non-melanoma skin cancer.
Q27940277A role for Saccharomyces cerevisiae Tpa1 protein in direct alkylation repair
Q37021545A ubiquitylation site in Cockayne syndrome B required for repair of oxidative DNA damage, but not for transcription-coupled nucleotide excision repair
Q90701977AFF1 acetylation by p300 temporally inhibits transcription during genotoxic stress response
Q47144713ATM and CDK2 control chromatin remodeler CSB to inhibit RIF1 in DSB repair pathway choice
Q58716872Base and nucleotide excision repair facilitate resolution of platinum drugs-induced transcription blockage
Q92715820Beyond the Trinity of ATM, ATR, and DNA-PK: Multiple Kinases Shape the DNA Damage Response in Concert With RNA Metabolism
Q34554610Blinded by the UV light: how the focus on transcription-coupled NER has distracted from understanding the mechanisms of Cockayne syndrome neurologic disease
Q53209983CSA and CSB proteins interact with p53 and regulate its Mdm2-dependent ubiquitination.
Q41679939Citrate-capped gold nanoparticles for the label-free detection of ubiquitin C-terminal hydrolase-1.
Q39294995Cockayne Syndrome group B protein interacts with TRF2 and regulates telomere length and stability
Q35166110Cockayne syndrome B protein antagonizes OGG1 in modulating CAG repeat length in vivo
Q38712278Cockayne syndrome B protein regulates recruitment of the Elongin A ubiquitin ligase to sites of DNA damage.
Q92864285Cockayne syndrome group A and B proteins function in rRNA transcription through nucleolin regulation
Q35894155Cockayne syndrome group B protein prevents the accumulation of damaged mitochondria by promoting mitochondrial autophagy.
Q54114843Coupling between nucleotide excision repair and gene expression.
Q28263882DNA damage during the G0/G1 phase triggers RNA-templated, Cockayne syndrome B-dependent homologous recombination
Q90604511Deficiency in classical nonhomologous end-joining-mediated repair of transcribed genes is linked to SCA3 pathogenesis
Q37873069Detecting UV-lesions in the genome: The modular CRL4 ubiquitin ligase does it best!
Q37138592E3-ubiquitin ligase Nedd4 determines the fate of AID-associated RNA polymerase II in B cells.
Q34503412Elements That Regulate the DNA Damage Response of Proteins Defective in Cockayne Syndrome
Q38078209Genetic syndromes caused by mutations in epigenetic genes
Q35647709Identification of Novel Proteins Co-Purifying with Cockayne Syndrome Group B (CSB) Reveals Potential Roles for CSB in RNA Metabolism and Chromatin Dynamics.
Q28542415Identification of two missense mutations of ERCC6 in three Chinese sisters with Cockayne syndrome by whole exome sequencing
Q27022616Mammalian transcription-coupled excision repair
Q90387567Mechanistic insights into the regulation of transcription and transcription-coupled DNA repair by Cockayne syndrome protein B
Q36874609Mitochondrial deficiency in Cockayne syndrome
Q92340005Molecular basis of chromatin remodeling by Rhp26, a yeast CSB ortholog
Q34441416MultiDsk: a ubiquitin-specific affinity resin
Q39762223Multiomic Analysis of the UV-Induced DNA Damage Response
Q36963083Multiple interaction partners for Cockayne syndrome proteins: implications for genome and transcriptome maintenance
Q57753525Novel frame shift mutation in ERCC6 leads to a severe form of Cockayne syndrome with postnatal growth failure and early death: A case report and brief literature review
Q37187541Proteasome-mediated processing of Def1, a critical step in the cellular response to transcription stress
Q50287449Recovery of RNA synthesis after TC-NER
Q90110326Regulation of the RNAPII Pool Is Integral to the DNA Damage Response
Q34830575Regulation of the Rhp26ERCC6/CSB chromatin remodeler by a novel conserved leucine latch motif
Q26747328Ring of Change: CDC48/p97 Drives Protein Dynamics at Chromatin
Q64230159Structural basis of ubiquitin recognition by the winged-helix domain of Cockayne syndrome group B protein
Q26995830Structure, function and regulation of CSB: a multi-talented gymnast
Q35516084Testicular nuclear receptor 4 (TR4) regulates UV light-induced responses via Cockayne syndrome B protein-mediated transcription-coupled DNA repair
Q34426620Tethering of the conserved piggyBac transposase fusion protein CSB-PGBD3 to chromosomal AP-1 proteins regulates expression of nearby genes in humans.
Q38815648The C-terminal Region and SUMOylation of Cockayne Syndrome Group B Protein Play Critical Roles in Transcription-coupled Nucleotide Excision Repair
Q52560605The Cellular Response to Transcription-Blocking DNA Damage.
Q92755025The DNA repair protein SHPRH is a nucleosome-stimulated ATPase and a nucleosome-E3 ubiquitin ligase
Q35923273The conserved Cockayne syndrome B-piggyBac fusion protein (CSB-PGBD3) affects DNA repair and induces both interferon-like and innate antiviral responses in CSB-null cells.
Q94474083The cooperative action of CSB, CSA, and UVSSA target TFIIH to DNA damage-stalled RNA polymerase II
Q38563230The impact of base excision DNA repair in age-related neurodegenerative diseases
Q38217924The role of ubiquitin-binding domains in human pathophysiology
Q28070128Transcriptional and Posttranslational Regulation of Nucleotide Excision Repair: The Guardian of the Genome against Ultraviolet Radiation
Q38234052Ubiquitin at work: the ubiquitous regulation of the damage recognition step of NER.
Q34426055Understanding nucleotide excision repair and its roles in cancer and ageing.
Q38078156What role (if any) does the highly conserved CSB-PGBD3 fusion protein play in Cockayne syndrome?