Diversity of IncP-9 plasmids of Pseudomonas

scientific article

Diversity of IncP-9 plasmids of Pseudomonas is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1099/MIC.0.2008/017939-0
P932PMC publication ID2885752
P698PubMed publication ID18832300
P5875ResearchGate publication ID23296868

P50authorKornelia SmallaQ33113624
Sergey SokolovQ49685448
Marina TitokQ55816246
P2093author name stringChristopher M Thomas
Lewis E H Bingle
Yanina R Sevastsyanovich
Irina A Kosheleva
Anthony S Haines
Renata Krasowiak
Anastassia A Leuchuk
P2860cites workMolecular relationships between Pseudomonas INC P-9 degradative plasmids TOL, NAH, and SALQ70172096
Plasmids isolated from the sugar beet phyllosphere show little or no homology to molecular probes currently available for plasmid typingQ72414242
A pair of PCR primers for Incp-9 plasmidsQ73253358
PCR-based detection of mobile genetic elements in total community DNAQ73877527
Pseudomonas putida--a versatile biocatalystQ78864939
The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis toolsQ24248165
Gapped BLAST and PSI-BLAST: a new generation of protein database search programsQ24545170
A rapid alkaline extraction procedure for screening recombinant plasmid DNAQ24614998
The neighbor-joining method: a new method for reconstructing phylogenetic treesQ25939010
A comprehensive set of sequence analysis programs for the VAXQ26778432
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0Q26778434
Artemis: sequence visualization and annotationQ27861024
TreeView: an application to display phylogenetic trees on personal computersQ27861074
Organization and evolution of naphthalene catabolic pathways: sequence of the DNA encoding 2-hydroxychromene-2-carboxylate isomerase and trans-o-hydroxybenzylidenepyruvate hydratase-aldolase from the NAH7 plasmidQ28369173
Bacterial catabolic transposonsQ33541342
Transmissible Plasmid Coding Early Enzymes of Naphthalene Oxidation in Pseudomonas putidaQ33784915
Molecular diversity of plasmids bearing genes that encode toluene and xylene metabolism in Pseudomonas strains isolated from different contaminated sites in BelarusQ33987152
Paradigms of plasmid organizationQ33994576
Comparative biology of IncQ and IncQ-like plasmidsQ34010408
Mobile elements as a combination of functional modules.Q34499476
Genomic and functional analysis of the IncP-9 naphthalene-catabolic plasmid NAH7 and its transposon Tn4655 suggests catabolic gene spread by a tyrosine recombinaseQ34696950
Biodegradation, biotransformation, and biocatalysis (b3)Q34905240
Combination of the tod and the tol pathways in redesigning a metabolic route of Pseudomonas putida for the mineralization of a benzene, toluene, and p-xylene mixture.Q35184584
Detection and characterization of broad-host-range plasmids in environmental bacteria by PCR.Q35192180
Plasmids isolated from marine sediment microbial communities contain replication and incompatibility regions unrelated to those of known plasmid groupsQ35198340
Natural horizontal transfer of a naphthalene dioxygenase gene between bacteria native to a coal tar-contaminated field siteQ35201987
Diversity of Pseudomonas plasmids: to what extent?Q35654474
Expression and transfer of engineered catabolic pathways harbored by Pseudomonas spp. introduced into activated sludge microcosmsQ35694307
The evolution of pTF-FC2 and pTC-F14, two related plasmids of the IncQ-family.Q36057474
The evolution of IncP catabolic plasmids.Q36165508
Plasmid gene organization: naphthalene/salicylate oxidationQ36280676
Mobile catabolic genes in bacteriaQ36289677
Metabolism of benzoate and the methylbenzoates by Pseudomonas putida (arvilla) mt-2: evidence for the existence of a TOL plasmidQ36760222
Identification and classification of bacterial plasmidsQ37064518
The completely sequenced plasmid pEST4011 contains a novel IncP1 backbone and a catabolic transposon harboring tfd genes for 2,4-dichlorophenoxyacetic acid degradationQ37583361
Ecological and molecular maintenance strategies of mobile genetic elementsQ37587418
Catabolic mobile genetic elements and their potential use in bioaugmentation of polluted soils and watersQ37587424
Mosaic plasmids and mosaic replicons: evolutionary lessons from the analysis of genetic diversity in IncFII-related repliconsQ38308567
Engineering of quasi-natural Pseudomonas putida strains for toluene metabolism through an ortho-cleavage degradation pathway.Q39560065
Experimental evolution of catabolic pathways of bacteriaQ39612439
The relationship of degradative and resistance plasmids of Pseudomonas belonging to the same incompatibility groupQ39673185
The distribution of β-lactamase genes on plasmids found in PseudomonasQ39679825
Conjugative plasmids isolated from bacteria in marine environments show various degrees of homology to each other and are not closely related to well-characterized plasmidsQ39803598
The replication and stable-inheritance functions of IncP-9 plasmid pM3.Q40856696
Transcriptional control of the Pseudomonas TOL plasmid catabolic operons is achieved through an interplay of host factors and plasmid-encoded regulatorsQ41620651
OXIDATIVE METABOLISM OF PHENANTHRENE AND ANTHRACENE BY SOIL PSEUDOMONADS. THE RING-FISSION MECHANISM.Q42172460
Isolation and molecular characterization of a novel broad-host-range plasmid from Bordetella bronchiseptica with sequence similarities to plasmids from gram-positive organisms.Q42599637
Complete sequence and genetic organization of pDTG1, the 83 kilobase naphthalene degradation plasmid from Pseudomonas putida strain NCIB 9816-4.Q42632647
Sequence and analysis of the 46.6-kb plasmid pA1 from Sphingomonas sp. A1 that corresponds to the typical IncP-1beta plasmid backbone without any accessory geneQ42679098
Complete sequence of the IncP-9 TOL plasmid pWW0 from Pseudomonas putidaQ42692935
Mosaic structure of plasmids from natural populations of Escherichia coli.Q42966739
The 64 508 bp IncP-1β antibiotic multiresistance plasmid pB10 isolated from a waste-water treatment plant provides evidence for recombination between members of different branches of the IncP-1β groupQ43368119
Identification of the key genes of naphthalene catabolism in soil DNAQ44696470
The complete sequences of plasmids pB2 and pB3 provide evidence for a recent ancestor of the IncP-1beta group without any accessory genesQ45140765
Molecular classification of IncP-9 naphthalene degradation plasmidsQ46940247
Bacterial aromatic ring-cleavage enzymes are classified into two different gene families.Q48287182
PCR primers for detection and characterisation of IncP-9 plasmids.Q53142772
Prevalence of Pseudomonas aeruginosa strains possessing R factor in a hospitalQ53795789
Redesigning metabolic routes: manipulation of TOL plasmid pathway for catabolism of alkylbenzoates.Q54413058
[Nah-plasmids of IncP-9 group from natural strains of Pseudomonas].Q54572710
Plasmids from freshwater environments capable of IncQ retrotransfer are diverse and include pQKH54, a new IncP-1 subgroup archetype.Q54584426
The multiple antibiotic resistance IncP-1 plasmid pKJK5 isolated from a soil environment is phylogenetically divergent from members of the previously established α, β and δ sub-groupsQ57272595
Molecular relationships of degradative plasmids determined by in situ hybridisation of their endonuclease-generated fragmentsQ67358609
P433issuePt 10
P304page(s)2929-2941
P577publication date2008-10-01
P1433published inMicrobiologyQ11339587
P1476titleDiversity of IncP-9 plasmids of Pseudomonas
P478volume154

Reverse relations

cites work (P2860)
Q34490376Adaptation for protein synthesis efficiency in a naturally occurring self-regulating operon
Q35771470Assessing environmental drivers of microbial communities in estuarine soils of the Aconcagua River in Central Chile
Q37538155Conjugative plasmids: vessels of the communal gene pool
Q35108366Cultivation-independent screening revealed hot spots of IncP-1, IncP-7 and IncP-9 plasmid occurrence in different environmental habitats
Q37596957Draft Genome Sequence of Pseudomonas moraviensis R28-S.
Q37332245Host range diversification within the IncP-1 plasmid group.
Q91938921Identification of a Novel Plasmid Lineage Associated With the Dissemination of Metallo-β-Lactamase Genes Among Pseudomonads
Q36175574Identification of novel toluene monooxygenase genes in a hydrocarbon-polluted sediment using sequence- and function-based screening of metagenomic libraries
Q38717933Insights into the genomic plasticity of Pseudomonas putida KF715, a strain with unique biphenyl-utilizing activity and genome instability properties
Q44215989Metal oxides, clay minerals and charcoal determine the composition of microbial communities in matured artificial soils and their response to phenanthrene
Q41962424Occurrence of plasmids in the aromatic degrading bacterioplankton of the baltic sea
Q57072357Petroleum contamination and bioaugmentation in bacterial rhizosphere communities from Avicennia schaueriana
Q34186192Plasmids foster diversification and adaptation of bacterial populations in soil
Q34291217Predicting plasmid promiscuity based on genomic signature
Q33743353Shifts in abundance and diversity of mobile genetic elements after the introduction of diverse pesticides into an on-farm biopurification system over the course of a year
Q35056021The rulB gene of plasmid pWW0 is a hotspot for the site-specific insertion of integron-like elements found in the chromosomes of environmental Pseudomonas fluorescens group bacteria

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