Mobile catabolic genes in bacteria

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Mobile catabolic genes in bacteria is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1016/S1389-1723(99)80086-3
P698PubMed publication ID16232491

P2093author name stringFurukawa K
Tsuda M
Nishi A
Tan HM
P2860cites workInsertion sequence IS6100 on plasmid pOAD2, which degrades nylon oligomersQ39930673
The dehalogenase gene dehI from Pseudomonas putida PP3 is carried on an unusual mobile genetic element designated DEHQ39933325
Localization and functional analysis of structural and regulatory dehalogenase genes carried on DEH from Pseudomonas putida PP3Q39933332
Identification of a novel composite transposable element, Tn5280, carrying chlorobenzene dioxygenase genes of Pseudomonas sp. strain P51Q39946322
Toluene transposons Tn4651 and Tn4653 are class II transposonsQ39948254
Chromosomal location of TOL plasmid DNA in Pseudomonas putidaQ39961851
Evolutionary conservation of genes coding for meta pathway enzymes within TOL plasmids pWW0 and pWW53.Q39964378
The evolution of pathways for aromatic hydrocarbon oxidation in Pseudomonas.Q40535883
Molecular genetics and evolutionary relationship of PCB-degrading bacteriaQ40535913
Evolution of chlorocatechol catabolic pathways. Conclusions to be drawn from comparisons of lactone hydrolasesQ40535918
Catabolic transposonsQ40535924
Transfer and expression of PCB-degradative genes into heavy metal resistant Alcaligenes eutrophus strainsQ40535933
Conjugative transpositionQ40945171
Pathogenicity islands: bacterial evolution in quantum leapsQ41245669
The high-pathogenicity island of Yersinia pseudotuberculosis can be inserted into any of the three chromosomal asn tRNA genesQ41483783
Origins of the mobile gene cassettes found in integronsQ41627229
The cis-diol dehydrogenase cbaC gene of Tn5271 is required for growth on 3-chlorobenzoate but not 3,4-dichlorobenzoateQ42547331
Complete nucleotide sequence of Tn1721: gene organization and a novel gene product with features of a chemotaxis proteinQ42598845
Lack of homology between two haloacetate dehalogenase genes encoded on a plasmid from Moraxella sp. strain BQ42607895
Nucleotide sequence of salicylate hydroxylase gene and its 5'-flanking region of Pseudomonas putida KF715.Q42626052
Naphthalene degrading genes on plasmid NAH7 are on a defective transposonQ42632561
Identification of a DNA cytosine methyltransferase gene in conjugative transposon Tn5252.Q42672867
Two identical copies of IS1246, a 1275 base pair sequence related to other bacterial insertion sequences, enclose the xyl genes on TOL plasmid pWW0.Q42694917
Tn4371: A modular structure encoding a phage-like integrase, a Pseudomonas-like catabolic pathway, and RP4/Ti-like transfer functions.Q47994779
Tn5041: a chimeric mercury resistance transposon closely related to the toluene degradative transposon Tn4651.Q48046555
Chromosomal insertion of TOL transposons in Pseudomonas aeruginosa PAO.Q52237134
Molecular analysis of the plasmid-borne bed gene cluster from Pseudomonas putida ML2 and cloning of the cis-benzene dihydrodiol dehydrogenase gene.Q54659281
Cloning and expression of the plasmid-encoded benzene dioxygenase genes from Pseudomonas putida ML2.Q54706816
Genetic analysis of a transposon carrying toluene degrading genes on a TOL plasmid pWW0.Q54758580
Isolation and characterization of a 3-chlorobenzoate degrading pseudomonadQ69813539
Identification and characterization of Tn4653, a transposon covering the toluene transposon Tn4651 on TOL plasmid pWW0Q69848365
Molecular relationships between Pseudomonas INC P-9 degradative plasmids TOL, NAH, and SALQ70172096
Flux in the horizontal gene poolQ74190271
Mobile gene cassettes and integrons: capture and spread of genes by site-specific recombinationQ28303444
Pathogenicity islands of virulent bacteria: structure, function and impact on microbial evolutionQ28307679
Cloning and characterization of plasmid-encoded genes for the degradation of 1,2-dichloro-, 1,4-dichloro-, and 1,2,4-trichlorobenzene of Pseudomonas sp. strain P51Q28334620
Organization and evolution of naphthalene catabolic pathways: sequence of the DNA encoding 2-hydroxychromene-2-carboxylate isomerase and trans-o-hydroxybenzylidenepyruvate hydratase-aldolase from the NAH7 plasmidQ28369173
Bacterial catabolic transposonsQ33541342
Repeated sequences including RS1100 from Pseudomonas cepacia AC1100 function as IS elementsQ33902249
Functional and evolutionary relationships among diverse oxygenasesQ33972461
The Pseudomonas putida ML2 plasmid-encoded genes for benzene dioxygenase are unusual in codon usage and low in G+C contentQ34352083
Similarities and differences among 105 members of the Int family of site-specific recombinasesQ34652687
A new type of conjugative transposon encodes resistance to sulfamethoxazole, trimethoprim, and streptomycin in Vibrio cholerae O139.Q35609627
Characterization and expression of the plasmid-borne bedD gene from Pseudomonas putida ML2, which codes for a NAD+-dependent cis-benzene dihydrodiol dehydrogenaseQ35613797
CTnscr94, a conjugative transposon found in enterobacteriaQ35621277
Distribution of the catabolic transposon Tn5271 in a groundwater bioremediation systemQ36050190
The TOL (pWW0) catabolic plasmid.Q36071711
Characterization of the novel nisin-sucrose conjugative transposon Tn5276 and its insertion in Lactococcus lactisQ36118343
Pseudomonas putida KF715 bphABCD operon encoding biphenyl and polychlorinated biphenyl degradation: cloning, analysis, and expression in soil bacteriaQ36158725
Genetic homology between independently isolated chlorobenzoate-degradative plasmidsQ36325675
Bacterial plasmids and gene fluxQ36357116
Biodegradation of 2,4,5-trichlorophenoxyacetic acid by a pure culture of Pseudomonas cepacia.Q36708060
Organisation of the bph gene cluster of transposon Tn4371, encoding enzymes for the degradation of biphenyl and 4-chlorobiphenyl compounds.Q36846962
The Tn21 subgroup of bacterial transposable elementsQ37565315
Transpositional recombination in prokaryotesQ39495718
Low-frequency horizontal transfer of an element containing the chlorocatechol degradation genes from Pseudomonas sp. strain B13 to Pseudomonas putida F1 and to indigenous bacteria in laboratory-scale activated-sludge microcosms.Q39560943
Expression of the transposase gene tnpA of Tn4652 is positively affected by integration host factor.Q39566174
Int-B13, an unusual site-specific recombinase of the bacteriophage P4 integrase family, is responsible for chromosomal insertion of the 105-kilobase clc element of Pseudomonas sp. Strain B13.Q39568257
Genetics of naphthalene catabolism in pseudomonadsQ39645190
Nucleotide sequences and regulational analysis of genes involved in conversion of aniline to catechol in Pseudomonas putida UCC22(pTDN1).Q39844021
Identification of a catabolic transposon, Tn4371, carrying biphenyl and 4-chlorobiphenyl degradation genes in Alcaligenes eutrophus A5.Q39925494
Gene components responsible for discrete substrate specificity in the metabolism of biphenyl (bph operon) and toluene (tod operon).Q39929885
P433issue4
P304page(s)401-410
P577publication date1999-01-01
P1433published inJournal of Bioscience and BioengineeringQ15755170
P1476titleMobile catabolic genes in bacteria
P478volume87

Reverse relations

cites work (P2860)
Q30846631A 90-kilobase conjugative chromosomal element coding for biphenyl and salicylate catabolism in Pseudomonas putida KF715
Q43334628Bioaugmentation of activated sludge with two Pseudomonas putida strains for the degradation of 4-chlorophenol
Q40410525Biology of archaea from a novel family Cuniculiplasmataceae (Thermoplasmata) ubiquitous in hyperacidic environments.
Q34115191Characterization of a class II defective transposon carrying two haloacetate dehalogenase genes from Delftia acidovorans plasmid pUO1
Q39492828Cloning, nucleotide sequencing, and functional analysis of a novel, mobile cluster of biodegradation genes from Pseudomonas aeruginosa strain JB2.
Q37648039Complete Genome Sequence of the Polychlorinated Biphenyl-Degrading Bacterium Pseudomonas putida KF715 (NBRC 110667) Isolated from Biphenyl-Contaminated Soil
Q42693452Complete nucleotide sequence of carbazole/dioxin-degrading plasmid pCAR1 in Pseudomonas resinovorans strain CA10 indicates its mosaicity and the presence of large catabolic transposon Tn4676.
Q41071792Diversity of IncP-9 plasmids of Pseudomonas
Q33533993Exploring the evolutionary dynamics of plasmids: the Acinetobacter pan-plasmidome
Q39503764Genetic characterization and evolutionary implications of a car gene cluster in the carbazole degrader Pseudomonas sp. strain CA10.
Q37941835Horizontal transfer of dehalogenase genes involved in the catalysis of chlorinated compounds: evidence and ecological role
Q43283167Horizontal transfer of dehalogenase genes on IncP1beta plasmids during bacterial adaptation to degrade alpha-halocarboxylic acids
Q33553903Identification and characterization of Tn4656, a novel class II transposon carrying a set of toluene-degrading genes from TOL plasmid pWW53.
Q33855816Indications for acquisition of reductive dehalogenase genes through horizontal gene transfer by Dehalococcoides ethenogenes strain 195
Q42258028Multiple mechanisms contribute to lateral transfer of an organophosphate degradation (opd) island in Sphingobium fuliginis ATCC 27551.
Q33479985Novel organization of aromatic degradation pathway genes in a microbial community as revealed by metagenomic analysis
Q35913350Nucleotide sequence of plasmid pCNB1 from comamonas strain CNB-1 reveals novel genetic organization and evolution for 4-chloronitrobenzene degradation
Q35759677Region-specific insertion of transposons in combination with selection for high plasmid transferability and stability accounts for the structural similarity of IncP-1 plasmids
Q34317599Site-specific recombination system encoded by toluene catabolic transposon Tn4651
Q37052103Structure of Haloacetate-Catabolic IncP-1β Plasmid pUO1 and Genetic Mobility of Its Residing Haloacetate-Catabolic Transposon
Q35172600The role of mobile genetic elements in bacterial adaptation to xenobiotic organic compounds

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