Host range diversification within the IncP-1 plasmid group.

scientific article published on 03 September 2013

Host range diversification within the IncP-1 plasmid group. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1099/MIC.0.068387-0
P932PMC publication ID3836486
P698PubMed publication ID24002747
P5875ResearchGate publication ID256425548

P50authorKornelia SmallaQ33113624
Eva M TopQ91595750
Holger HeuerQ40482933
Hirokazu YanoQ42760500
P2093author name stringCeleste J Brown
Linda M Rogers
Molly G Knox
P2860cites workThe complete multipartite genome sequence of Cupriavidus necator JMP134, a versatile pollutant degraderQ21142625
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collectionQ22122301
Replication of an origin-containing derivative of plasmid RK2 dependent on a plasmid function provided in transQ24597491
MUSCLE: multiple sequence alignment with high accuracy and high throughputQ24613456
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye bindingQ25938984
Basic local alignment search toolQ25938991
Clustal W and Clustal X version 2.0Q27860517
MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony MethodsQ27860929
The genome of the natural genetic engineer Agrobacterium tumefaciens C58Q28492352
Comparative genomics of the IncA/C multidrug resistance plasmid family.Q30489055
A new family of mobilizable suicide plasmids based on broad host range R388 plasmid (IncW) and RP4 plasmid (IncPalpha) conjugative machineries and their cognate Escherichia coli host strainsQ30984224
Comparative genomics of pAKD4, the prototype IncP-1delta plasmid with a complete backboneQ33643074
Transposon Tn21, flagship of the floating genomeQ33728768
Plasmid donor affects host range of promiscuous IncP-1beta plasmid pB10 in an activated-sludge microbial communityQ33995911
Complete nucleotide sequence of TOL plasmid pDK1 provides evidence for evolutionary history of IncP-7 catabolic plasmidsQ34119158
Plasmids foster diversification and adaptation of bacterial populations in soilQ34186192
Predicting plasmid promiscuity based on genomic signatureQ34291217
Bacterial conjugative plasmids mobilize DNA transfer between bacteria and yeastQ34505179
Shifts in the host range of a promiscuous plasmid through parallel evolution of its replication initiation proteinQ34592627
Divergence of mobile genetic elements involved in the distribution of xenobiotic-catabolic capacity.Q35613132
Genes and speciationQ35634526
Piggery manure used for soil fertilization is a reservoir for transferable antibiotic resistance plasmidsQ46537060
Stability of a promiscuous plasmid in different hosts: no guarantee for a long-term relationship.Q51924350
Genomic organization and genomic structural rearrangements of Sphingobium japonicum UT26, an archetypal γ-hexachlorocyclohexane-degrading bacterium.Q52731547
Gentamicin resistance genes in environmental bacteria: prevalence and transfer.Q53953915
Transcription of repA, the gene of the initiation protein of the Pseudomonas plasmid pPS10, is autoregulated by interactions of the RepA protein at a symmetrical operator.Q54012553
Trimethoprim R Factors in Enterobacteria from Clinical SpecimensQ54295365
Ability of IncP-9 plasmid pM3 to replicate in Escherichia coli is dependent on both rep and par functions.Q54481751
Specific-purpose plasmid cloning vectors II. Broad host range, high copy number, RSF 1010-derived vectors, and a host-vector system for gene cloning in PseudomonasQ54528042
Plasmids from freshwater environments capable of IncQ retrotransfer are diverse and include pQKH54, a new IncP-1 subgroup archetype.Q54584426
Variation in permissiveness for broad-host-range plasmids among genetically indistinguishable isolates of Dickeya sp. from a small field plotQ57238322
Frequent conjugative transfer accelerates adaptation of a broad-host-range plasmid to an unfavorable Pseudomonas putida hostQ57238328
The multiple antibiotic resistance IncP-1 plasmid pKJK5 isolated from a soil environment is phylogenetically divergent from members of the previously established α, β and δ sub-groupsQ57272595
Homology in the transfer origins of broad host range IncP plasmids: definition of two subgroups of P plasmidsQ70924676
Host range of conjugation and replication functions of the Escherichia coli sex plasmid Flac. Comparison with the broad host-range plasmid RK2Q71645704
Roles of long and short replication initiation proteins in the fate of IncP-1 plasmids.Q35806093
KorA protein of promiscuous plasmid RK2 controls a transcriptional switch between divergent operons for plasmid replication and conjugative transferQ35862902
Autorepressor properties of the pi-initiation protein encoded by plasmid R6K.Q36132816
P1 plasmid replication: measurement of initiator protein concentration in vivoQ36240951
Regions of broad-host-range plasmid RK2 involved in replication and stable maintenance in nine species of gram-negative bacteriaQ36278381
Inferring the evolutionary history of IncP-1 plasmids despite incongruence among backbone gene treesQ36474943
Recombination between plasmids of incompatibility groups P-1 and P-2Q36578723
Genomics of IncP-1 antibiotic resistance plasmids isolated from wastewater treatment plants provides evidence for a widely accessible drug resistance gene poolQ36841958
Using Mahalanobis distance to compare genomic signatures between bacterial plasmids and chromosomes.Q37014746
Progress towards understanding the fate of plasmids in bacterial communitiesQ37174799
Diverse broad-host-range plasmids from freshwater carry few accessory genesQ37335561
The diversity of conjugative relaxases and its application in plasmid classificationQ37461189
Plasmid transfer from Escherichia coli to Bacteroides fragilis: differential expression of antibiotic resistance phenotypesQ37577714
P1 plasmid replication: multiple functions of RepA protein at the originQ37685319
Call of the wild: antibiotic resistance genes in natural environmentsQ37700168
The behavior and significance of degradative plasmids belonging to Inc groups in Pseudomonas within natural environments and microcosms.Q37876072
Identification of bacterial plasmids based on mobility and plasmid population biology.Q37895333
Diversity, biology and evolution of IncQ-family plasmids.Q37950817
The role of the natural environment in the emergence of antibiotic resistance in gram-negative bacteriaQ38076545
Incompatibility group P plasmids: genetics, evolution, and use in genetic manipulationQ39683511
Modulation of pPS10 host range by plasmid-encoded RepA initiator proteinQ39706000
Conjugative plasmids isolated from bacteria in marine environments show various degrees of homology to each other and are not closely related to well-characterized plasmidsQ39803598
Mangrove microniches determine the structural and functional diversity of enriched petroleum hydrocarbon-degrading consortiaQ39841497
IncP-1ε Plasmids are Important Vectors of Antibiotic Resistance Genes in Agricultural Systems: Diversification Driven by Class 1 Integron Gene CassettesQ40482877
Crosstalk between plasmid vegetative replication and conjugative transfer: repression of the trfA operon by trbA of broad host range plasmid RK2.Q40533403
Diversity of IncP-9 plasmids of PseudomonasQ41071792
Host range and transfer efficiency of incompatibility group HI plasmidsQ41503073
Functional Characterization of Replication and Stability Factors of an Incompatibility Group P-1 Plasmid from Xylella fastidiosaQ41706669
Interactions of DnaA proteins from distantly related bacteria with the replication origin of the broad host range plasmid RK2.Q41728432
Phylogeny of replication initiator protein TrfA reveals a highly divergent clade of incompatibility group P1 plasmidsQ41874268
The IncP-1 plasmid backbone adapts to different host bacterial species and evolves through homologous recombinationQ42092273
GenomeMatcher: a graphical user interface for DNA sequence comparisonQ42199727
Plasmid pBP136 from Bordetella pertussis represents an ancestral form of IncP-1beta plasmids without accessory mobile elements.Q42605811
The genome sequence of the incompatibility group Iγ plasmid R621a: evolution of IncI plasmidsQ42609350
Dissection of the switch between genes for replication and transfer of promiscuous plasmid RK2: basis of the dominance of trfAp over trbAp and specificity for KorA in controlling the switchQ42651003
The Population Biology of Bacterial Plasmids: A PRIORI Conditions for the Existence of Conjugationally Transmitted Factors.Q42974347
The 64 508 bp IncP-1β antibiotic multiresistance plasmid pB10 isolated from a waste-water treatment plant provides evidence for recombination between members of different branches of the IncP-1β groupQ43368119
All IncP-1 plasmid subgroups, including the novel epsilon subgroup, are prevalent in the influent of a Danish wastewater treatment plantQ43369333
Modulation of pPS10 host range by DnaA.Q44169692
Expansion of the IncX plasmid family for improved identification and typing of novel plasmids in drug-resistant EnterobacteriaceaeQ46440410
P433issuePt 11
P304page(s)2303-2315
P577publication date2013-09-03
P1433published inMicrobiologyQ11339587
P1476titleHost range diversification within the IncP-1 plasmid group
P478volume159

Reverse relations

cites work (P2860)
Q39785100Broad host range plasmids can invade an unexpectedly diverse fraction of a soil bacterial community
Q36010846Complete Nucleotide Sequence of IncP-1β Plasmid pDTC28 Reveals a Non-Functional Variant of the blaGES-Type Gene
Q37335561Diverse broad-host-range plasmids from freshwater carry few accessory genes
Q36735017Diversification of broad host range plasmids correlates with the presence of antibiotic resistance genes
Q33884746Emerging patterns of plasmid-host coevolution that stabilize antibiotic resistance
Q64076745Fate of Antibiotic Resistant Pseudomonas putida and Broad Host Range Plasmid in Natural Soil Microcosms
Q40515882Lateral gene transfer, bacterial genome evolution, and the Anthropocene
Q41948466Novel assay to measure the plasmid mobilizing potential of mixed microbial communities
Q97587531Pathways for horizontal gene transfer in bacteria revealed by a global map of their plasmids
Q26738704Replisome Assembly at Bacterial Chromosomes and Iteron Plasmids
Q38833121Scoping the effectiveness and evolutionary obstacles in using plasmid-dependent phages to fight antibiotic resistance
Q37126788Source-sink plasmid transfer dynamics maintain gene mobility in soil bacterial communities.
Q99619624Universal whole-sequence-based plasmid typing and its utility to prediction of host range and epidemiological surveillance
Q41876631Widespread dissemination of class 1 integron components in soils and related ecosystems as revealed by cultivation-independent analysis

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