A deeper look into Comet--implementation and features

scientific article published on 27 June 2015

A deeper look into Comet--implementation and features is …
instance of (P31):
scholarly articleQ13442814

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P6179Dimensions Publication ID1020128693
P356DOI10.1007/S13361-015-1179-X
P8608Fatcat IDrelease_xe6iwxsorjhp5d7eju5fwaxjoa
P932PMC publication ID4607604
P698PubMed publication ID26115965
P5875ResearchGate publication ID279300934

P50authorJimmy K. EngQ63247801
Michael J MacCossQ87441179
P2093author name stringWilliam S Noble
Michael R Hoopmann
Jarrett D Egertson
Tahmina A Jahan
P2860cites workPatternLab for proteomics: a tool for differential shotgun proteomicsQ24653597
Statistical significance for genomewide studiesQ24681264
An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein databaseQ27861106
N-terminal acetyltransferases and sequence requirements for N-terminal acetylation of eukaryotic proteinsQ27932762
Method to correlate tandem mass spectra of modified peptides to amino acid sequences in the protein databaseQ30014825
Protein interactions, post-translational modifications and topologies in human cellsQ30426414
A uniform proteomics MS/MS analysis platform utilizing open XML file formatsQ30478423
MASSyPup--an 'out of the box' solution for the analysis of mass spectrometry dataQ30738680
Mass spectrometric protein identification using the global proteome machine.Q30989300
Computational Proteomics Analysis System (CPAS): an extensible, open-source analytic system for evaluating and publishing proteomic data and high throughput biological experimentsQ31028802
MacroSEQUEST: efficient candidate-centric searching and high-resolution correlation analysis for large-scale proteomics data setsQ33649026
Proteomic and phosphoproteomic comparison of human ES and iPS cellsQ34028873
Computing exact p-values for a cross-correlation shotgun proteomics score functionQ34157708
ProHits: integrated software for mass spectrometry-based interaction proteomicsQ34211917
Comet: an open-source MS/MS sequence database search toolQ34311405
PRIDE: the proteomics identifications databaseQ34436630
Tempest: GPU-CPU computing for high-throughput database spectral matchingQ36095681
Overview of tandem mass spectrometry (MS/MS) database search algorithmsQ37144829
Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradationQ37404493
Protein identification using Sorcerer 2 and SEQUEST.Q37643644
Faster SEQUEST searching for peptide identification from tandem mass spectraQ38294543
Examining troughs in the mass distribution of all theoretically possible tryptic peptides.Q38607535
The Transformation of Glutaminic Acid into l-Pyrrolidonecarboxylic Acid in Aqueous SolutionQ39486329
Statistical calibration of the SEQUEST XCorr functionQ41830797
Rapid and accurate peptide identification from tandem mass spectraQ43147563
A fast SEQUEST cross correlation algorithmQ45179778
PeptideShaker enables reanalysis of MS-derived proteomics data sets.Q49024658
P433issue11
P304page(s)1865-1874
P577publication date2015-06-27
P1433published inJournal of the American Society for Mass SpectrometryQ3020250
P1476titleA deeper look into Comet--implementation and features
P478volume26

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