Transcriptional profiling of the model Archaeon Halobacterium sp. NRC-1: responses to changes in salinity and temperature

scientific article published on 25 July 2007

Transcriptional profiling of the model Archaeon Halobacterium sp. NRC-1: responses to changes in salinity and temperature is …
instance of (P31):
scholarly articleQ13442814

External links are
P6179Dimensions Publication ID1037928060
P356DOI10.1186/1746-1448-3-6
P932PMC publication ID1971269
P698PubMed publication ID17651475
P5875ResearchGate publication ID6188187

P2093author name stringPriya DasSarma
Shiladitya DasSarma
Jochen A Müller
James A Coker
Jeffrey Kumar
P2860cites workLysis and dissolution of cells and envelopes of an extremely halophilic bacteriumQ37408218
A novel mode of sensory transduction in archaea: binding protein-mediated chemotaxis towards osmoprotectants and amino acidsQ39644892
An integrated systems approach for understanding cellular responses to gamma radiationQ40512499
Arsenic resistance in Halobacterium sp. strain NRC-1 examined by using an improved gene knockout system.Q40816248
Upregulation of cytosolic chaperonin CCT subunits during recovery from chemical stress that causes accumulation of unfolded proteinsQ40894606
Archaebacterial heat-shock proteins.Q41566463
A systems view of haloarchaeal strategies to withstand stress from transition metalsQ41626547
Increase in negative supercoiling of plasmid DNA in Escherichia coli exposed to cold shockQ41929539
Domain stability in the AAA+ ATPase ClpB from Escherichia coliQ41975228
Salt tolerance of archaeal extremely halophilic lipid membranesQ43019589
HMG-CoA reductase is regulated by salinity at the level of transcription in Haloferax volcanii.Q43021136
Analysis of left-handed Z-DNA formation in short d(CG)n sequences in Escherichia coli and Halobacterium halobium plasmids. Stabilization by increasing repeat length and DNA supercoiling but not salinityQ43023827
brp and blh are required for synthesis of the retinal cofactor of bacteriorhodopsin in Halobacterium salinarumQ43510596
MpcT is the transducer for membrane potential changes in Halobacterium salinarumQ45307973
An Arabidopsis GSK3/shaggy-like gene that complements yeast salt stress-sensitive mutants is induced by NaCl and abscisic acidQ47972979
Sequence, expression and evolutionary relationships of carbamoyl phosphate synthetase I in the toad Xenopus laevisQ48080453
The role of plant CCTalpha in salt- and osmotic-stress toleranceQ48281046
Probing the geometric and electronic structures of the low-temperature azide adduct and the product-inhibited form of oxidized manganese superoxide dismutase.Q54492142
Post-genomics of the model haloarchaeon Halobacterium sp. NRC-1Q57103308
Control of DNA topology during thermal stress in hyperthermophilic archaea: DNA topoisomerase levels, activities and induced thermotolerance during heat and cold shock in SulfolobusQ60134803
UV irradiation induces homologous recombination genes in the model archaeon, Halobacterium sp. NRC-1Q21203696
Coping with cold: the genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125Q22065745
Genome sequence of Halobacterium species NRC-1Q22066243
Biosynthesis of ether-type polar lipids in archaea and evolutionary considerationsQ24671676
Characterization of the Staphylococcus aureus heat shock, cold shock, stringent, and SOS responses and their effects on log-phase mRNA turnoverQ24678182
Organic compatible solutes of halotolerant and halophilic microorganismsQ24815605
FK506-binding protein of the hyperthermophilic archaeum, Thermococcus sp. KS-1, a cold-shock-inducible peptidyl-prolyl cis-trans isomerase with activities to trap and refold denatured proteinsQ28343586
The Hsp70 and Hsp60 chaperone machinesQ29547601
Expression profiling using microarrays fabricated by an ink-jet oligonucleotide synthesizerQ29617394
Unfolding of microarray data.Q30661256
Glycine betaine, carnitine, and choline enhance salinity tolerance and prevent the accumulation of sodium to a level inhibiting growth of Tetragenococcus halophila.Q31476270
Snapshot of a large dynamic replicon in a halophilic archaeon: megaplasmid or minichromosome?Q31958293
Structural diversity of membrane lipids in members of HalobacteriaceaeQ33178724
Identical Hik-Rre systems are involved in perception and transduction of salt signals and hyperosmotic signals but regulate the expression of individual genes to different extents in synechocystisQ33213531
Cold-adapted archaeaQ33244208
Extremely radiation-resistant mutants of a halophilic archaeon with increased single-stranded DNA-binding protein (RPA) gene expression.Q33300758
Cold shock of a hyperthermophilic archaeon: Pyrococcus furiosus exhibits multiple responses to a suboptimal growth temperature with a key role for membrane-bound glycoproteins.Q33553697
Genomic analysis of anaerobic respiration in the archaeon Halobacterium sp. strain NRC-1: dimethyl sulfoxide and trimethylamine N-oxide as terminal electron acceptorsQ33714526
Alpha-crystallin-type heat shock proteins: socializing minichaperones in the context of a multichaperone network.Q33969470
Salt-dependent properties of proteins from extremely halophilic bacteriaQ34068337
Understanding the adaptation of Halobacterium species NRC-1 to its extreme environment through computational analysis of its genome sequenceQ34094195
The role of glutathione-S-transferase in anti-cancer drug resistanceQ34272162
Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1Q34342155
Cold adaptation in the Antarctic Archaeon Methanococcoides burtonii involves membrane lipid unsaturationQ34373070
Genomic and genetic dissection of an archaeal regulonQ34471104
Proteomic analysis of acidic chaperones, and stress proteins in extreme halophile Halobacterium NRC-1: a comparative proteomic approach to study heat shock responseQ34665825
Heat shock response by the hyperthermophilic archaeon Pyrococcus furiosusQ34993511
Characterization of two heat shock genes from Haloferax volcanii: a model system for transcription regulation in the ArchaeaQ35631289
Structure and function of cold shock proteins in archaea.Q35949283
Heat-inactivated proteins are rescued by the DnaK.J-GrpE set and ClpB chaperonesQ36390259
Isolation and chromosomal distribution of natural Z-DNA-forming sequences in Halobacterium halobiumQ36807259
P304page(s)6
P577publication date2007-07-25
P1433published inSaline SystemsQ15761876
P1476titleTranscriptional profiling of the model Archaeon Halobacterium sp. NRC-1: responses to changes in salinity and temperature
P478volume3

Reverse relations

cites work (P2860)
Q94545143Acid Experimental Evolution of the Haloarchaeon Halobacterium sp. NRC-1 Selects Mutations Affecting Arginine Transport and Catabolism
Q33768399An evolutionarily conserved RNase-based mechanism for repression of transcriptional positive autoregulation
Q34393453An improved genetic system for bioengineering buoyant gas vesicle nanoparticles from Haloarchaea.
Q43032716Archaeal transcriptional regulation of the prokaryotic KdpFABC complex mediating K(+) uptake in H. salinarum
Q28655746Bioengineering radioresistance by overproduction of RPA, a mammalian-type single-stranded DNA-binding protein, in a halophilic archaeon
Q36941934Biology and survival of extremely halophilic archaeon Haloarcula marismortui RR12 isolated from Mumbai salterns, India in response to salinity stress
Q46455186Characterization of hypothetical protein VNG0128C from Halobacterium NRC-1 reveals GALE like activity and its involvement in Leloir pathway of galactose metabolism
Q34548717Cloning, overexpression, purification, and characterization of a polyextremophilic β-galactosidase from the Antarctic haloarchaeon Halorubrum lacusprofundi
Q58707502Complex Effects of Cytochrome P450 Monooxygenase on Purple Membrane and Bacterioruberin Production in an Extremely Halophilic Archaeon: Genetic, Phenotypic, and Transcriptomic Analyses
Q48044203Differential Gene Expression in Response to Salinity and Temperature in a Haloarcula Strain from Great Salt Lake, Utah
Q43028759Differentially expressed genes after hyper- and hypo-salt stress in the halophilic archaeon Methanohalophilus portucalensis
Q36676481Dissection of the regulatory mechanism of a heat-shock responsive promoter in Haloarchaea: a new paradigm for general transcription factor directed archaeal gene regulation.
Q33787012Diversity in transcripts and translational pattern of stress proteins in marine extremophiles
Q41677269Effects of salinity on the cellular physiological responses of Natrinema sp. J7-2
Q33705214Functional analysis of the three TATA binding protein homologs in Methanosarcina acetivorans
Q33300157Genetic and transcriptomic analysis of transcription factor genes in the model halophilic Archaeon: coordinate action of TbpD and TfbA
Q48074424Genome sequences of Halobacterium species
Q97524200Genome wide transcriptomic analysis of the soil ammonia oxidizing archaeon Nitrososphaera viennensis upon exposure to copper limitation
Q36281028Genome-wide responses of the model archaeon Halobacterium sp. strain NRC-1 to oxygen limitation.
Q35647892Global Microarray Analysis of Alkaliphilic Halotolerant Bacterium Bacillus sp. N16-5 Salt Stress Adaptation
Q34571576Hot transcriptomics
Q55416513Hundreds of novel composite genes and chimeric genes with bacterial origins contributed to haloarchaeal evolution.
Q33578350Large scale physiological readjustment during growth enables rapid, comprehensive and inexpensive systems analysis
Q36482339Lipids of prokaryotic origin at the base of marine food webs
Q37832278Model organisms for genetics in the domain Archaea: methanogens, halophiles, Thermococcales and Sulfolobales
Q37643253Model organisms retain an "ecological memory" of complex ecologically relevant environmental variation.
Q37302010Multiple replication origins of Halobacterium sp. strain NRC-1: properties of the conserved orc7-dependent oriC1.
Q43014971Nmag_2608, an extracellular ubiquitin-like domain-containing protein from the haloalkaliphilic archaeon Natrialba magadii
Q37519416OMICS in ecology: systems level analyses of Halobacterium salinarum reveal large-scale temperature-mediated changes and a requirement of CctA for thermotolerance
Q21203694On the origin of prokaryotic "species": the taxonomy of halophilic Archaea
Q34295703On the response of halophilic archaea to space conditions
Q43022323RETRACTED: Identifying halophilic proteins based on random forests with preprocessing of the pseudo-amino acid composition
Q34108205Selective depletion of Sulfolobus solfataricus transcription factor E under heat shock conditions
Q89866021Surviving salt fluctuations: stress and recovery in Halobacterium salinarum, an extreme halophilic Archaeon
Q41689740Systematic Discovery of Archaeal Transcription Factor Functions in Regulatory Networks through Quantitative Phenotyping Analysis
Q56927853Temperature-dependent global gene expression in the Antarctic archaeon Methanococcoides burtonii
Q64903086The Primary Antisense Transcriptome of Halobacterium salinarum NRC-1.
Q42917474The effects of extremes of pH on the growth and transcriptomic profiles of three haloarchaea
Q26852599The function of gas vesicles in halophilic archaea and bacteria: theories and experimental evidence
Q43026756Transcriptional analysis of the hsp70 gene in a haloarchaeon Natrinema sp. J7 under heat and cold stress
Q33499543Transcriptional response of the model planctomycete Rhodopirellula baltica SH1(T) to changing environmental conditions
Q43025271Transcriptional responses to biologically relevant doses of UV-B radiation in the model archaeon, Halobacterium sp. NRC-1.
Q40968621Transcriptome analysis of Haloquadratum walsbyi: vanity is but the surface

Search more.