The C. elegans SNAPc component SNPC-4 coats piRNA domains and is globally required for piRNA abundance

scientific article published on October 2014

The C. elegans SNAPc component SNPC-4 coats piRNA domains and is globally required for piRNA abundance is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1016/J.DEVCEL.2014.09.015
P932PMC publication ID4223638
P698PubMed publication ID25373775

P50authorValerie ReinkeQ57338308
P2093author name stringKathryn E Gardner
Guilin Wang
Timothy G Johnstone
Dionna M Kasper
P2860cites workThe large subunit of basal transcription factor SNAPc is a Myb domain protein that interacts with Oct-1.Q24317465
The genetics of Caenorhabditis elegansQ24533408
Real-time quantification of microRNAs by stem-loop RT-PCRQ24535510
A conserved upstream motif orchestrates autonomous, germline-enriched expression of Caenorhabditis elegans piRNAsQ27323959
Genome-wide identification of binding sites defines distinct functions for Caenorhabditis elegans PHA-4/FOXA in development and environmental responseQ27348311
Controlling long-range genomic interactions at a native locus by targeted tethering of a looping factorQ28268499
ChIP-seq guidelines and practices of the ENCODE and modENCODE consortiaQ28274448
Biology of PIWI-interacting RNAs: new insights into biogenesis and function inside and outside of germlinesQ28278697
Discrete small RNA-generating loci as master regulators of transposon activity in DrosophilaQ28292093
Clustered protocadherinsQ28295657
Integrative analysis of the Caenorhabditis elegans genome by the modENCODE projectQ28301622
A novel class of small RNAs bind to MILI protein in mouse testesQ28505738
Characterization of the piRNA Complex from Rat TestesQ29542681
Functional genomic analysis of C. elegans chromosome I by systematic RNA interferenceQ29547812
Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegansQ29616062
PRDE-1 is a nuclear factor essential for the biogenesis of Ruby motif-dependent piRNAs in C. elegansQ33588098
A C. elegans Piwi, PRG-1, regulates 21U-RNAs during spermatogenesisQ34011879
Piwi and piRNAs act upstream of an endogenous siRNA pathway to suppress Tc3 transposon mobility in the Caenorhabditis elegans germlineQ34012402
The SANT domain: a unique histone-tail-binding module?Q34308307
Genomic study of RNA polymerase II and III SNAPc-bound promoters reveals a gene transcribed by both enzymes and a broad use of common activators.Q34481863
Diverse transcription factor binding features revealed by genome-wide ChIP-seq in C. elegansQ34625961
An MLL/COMPASS subunit functions in the C. elegans dosage compensation complex to target X chromosomes for transcriptional regulation of gene expressionQ34626783
Trans-splicing and operonsQ34720214
Small noncoding RNAs in the germlineQ35234616
Promoters recognized by forkhead proteins exist for individual 21U-RNAsQ36240758
Architectural arrangement of cloned proximal sequence element-binding protein subunits on Drosophila U1 and U6 snRNA gene promotersQ36420999
CapSeq and CIP-TAP identify Pol II start sites and reveal capped small RNAs as C. elegans piRNA precursorsQ36635707
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodesQ36660143
An ancient transcription factor initiates the burst of piRNA production during early meiosis in mouse testesQ36899631
PRG-1 and 21U-RNAs interact to form the piRNA complex required for fertility in C. elegansQ36943578
Transcriptional regulation of human small nuclear RNA genesQ37149528
X chromosome repression by localization of the C. elegans dosage compensation machinery to sites of transcription initiationQ37367035
Extra-transcriptional functions of RNA Polymerase III complexes: TFIIIC as a potential global chromatin bookmark.Q37943943
PIWI-interacting RNAs: from generation to transgenerational epigeneticsQ38116797
Characterization of a Drosophila proximal-sequence-element-binding protein involved in transcription of small nuclear RNA genesQ38343415
A genome-scale resource for in vivo tag-based protein function exploration in C. elegansQ38655263
Genomic binding profiles of functionally distinct RNA polymerase III transcription complexes in human cellsQ39710992
Proximal sequence element-binding transcription factor (PTF) is a multisubunit complex required for transcription of both RNA polymerase II- and RNA polymerase III-dependent small nuclear RNA genesQ40015992
Tissue-specific direct targets of Caenorhabditis elegans Rb/E2F dictate distinct somatic and germline programsQ40587321
Defining the RNA polymerase III transcriptome: Genome-wide localization of the RNA polymerase III transcription machinery in human cellsQ40784094
A positioned nucleosome on the human U6 promoter allows recruitment of SNAPc by the Oct-1 POU domain.Q42507615
Integral nuclear pore proteins bind to Pol III-transcribed genes and are required for Pol III transcript processing in C. elegansQ42961294
A switch between topological domains underlies HoxD genes collinearity in mouse limbsQ45172307
A family of zinc-finger proteins is required for chromosome-specific pairing and synapsis during meiosis in C. elegans.Q45933828
P433issue2
P407language of work or nameEnglishQ1860
P921main subjectCaenorhabditis elegansQ91703
Piwi-interacting RNAQ2367421
P1104number of pages14
P304page(s)145-158
P577publication date2014-10-01
P1433published inDevelopmental CellQ1524277
P1476titleThe C. elegans SNAPc component SNPC-4 coats piRNA domains and is globally required for piRNA abundance
P478volume31

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cites work (P2860)
Q30848469A Systematic RNAi Screen Reveals a Novel Role of a Spindle Assembly Checkpoint Protein BuGZ in Synaptic Transmission in C. elegans
Q93253703A Tudor domain protein, SIMR-1, promotes siRNA production at piRNA-targeted mRNAs in C. elegans
Q64054739Comparative Epigenomics Reveals that RNA Polymerase II Pausing and Chromatin Domain Organization Control Nematode piRNA Biogenesis
Q64230301Function and Evolution of Nematode RNAi Pathways
Q37719263Identification of an RNA Polymerase III Regulator Linked to Disease-Associated Protein Aggregation
Q38831509Integrative analysis unveils new functions for the Drosophila Cutoff protein in noncoding RNA biogenesis and gene regulation
Q64993308Isolated C. elegans germ nuclei exhibit distinct genomic profiles of histone modification and gene expression.
Q92417839PETISCO is a novel protein complex required for 21U RNA biogenesis and embryonic viability
Q59350769PIWI-interacting RNAs: small RNAs with big functions
Q47372758The Germline-Specific Factor OEF-1 Facilitates Coordinated Progression Through Germ Cell Development in Caenorhabditis elegans
Q60922622The USTC co-opts an ancient machinery to drive piRNA transcription in
Q47237663The modERN Resource: Genome-Wide Binding Profiles for Hundreds of Drosophila and Caenorhabditis elegans Transcription Factors
Q58725198The piRNA pathway responds to environmental signals to establish intergenerational adaptation to stress
Q36394957tRNA processing defects induce replication stress and Chk2-dependent disruption of piRNA transcription.

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