Evaluation of suitable reference genes for gene expression studies in bovine muscular tissue

scientific article published on 11 September 2008

Evaluation of suitable reference genes for gene expression studies in bovine muscular tissue is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1186/1471-2199-9-79
P932PMC publication ID2561043
P698PubMed publication ID18786244
P5875ResearchGate publication ID23251923

P2093author name stringRaquel Pérez
Isabel Tupac-Yupanqui
Susana Dunner
P2860cites workQuantitative real-time reverse transcription polymerase chain reaction: normalization to rRNA or single housekeeping genes is inappropriate for human tissue biopsies.Q44202854
Single muscle fiber gene expression in human skeletal muscle: validation of internal control with exerciseQ47234444
BLAST QuickStart: example-driven web-based BLAST tutorialQ48076544
Tenth annual nucleic acid-based technologies: time to stop and think. Washington, DC, USA, 24-26 June, 2002.Q50703581
Gene expression studies in prostate cancer tissue: which reference gene should be selected for normalization?Q52936360
Gene expression profiling of bovine macrophages in response to Escherichia coli O157:H7 lipopolysaccharide.Q54505200
Validation of housekeeping genes for normalizing RNA expression in real-time PCR.Q54708147
Expression profiling identifies dysregulation of myosin heavy chains IIb and IIx during limb immobilization in the soleus muscles of old rats.Q54755982
New Indicators of Beef Sensory Quality Revealed by Expression of Specific GenesQ61479819
Unsuitability of using ribosomal RNA as loading control for Northern blot analyses related to the imbalance between messenger and ribosomal RNA content in rat mammary tumorsQ73352940
Exercise-induced expression of vascular endothelial growth factor mRNA in rat skeletal muscle is dependent on fibre typeQ73669989
Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genesQ24534395
Statistical modeling for selecting housekeeper genesQ24797672
Towards standardization of RNA quality assessment using user-independent classifiers of microcapillary electrophoresis tracesQ24805950
Evaluation of potential reference genes in real-time RT-PCR studies of Atlantic salmonQ24811587
Selection of reference genes for quantitative real-time PCR in bovine preimplantation embryosQ24812689
DINAMelt web server for nucleic acid melting predictionQ24813639
Modulation of extracellular matrix genes reflects the magnitude of physiological adaptation to aerobic exercise training in humansQ24815394
Basic local alignment search toolQ25938991
Primer3 on the WWW for general users and for biologist programmersQ27861030
Guideline to reference gene selection for quantitative real-time PCRQ28237161
Expression of fos and jun genes in human skeletal muscle after exerciseQ28261226
Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper – Excel-based tool using pair-wise correlationsQ29304271
Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data setsQ29615465
Real time quantitative PCRQ29616373
Development of a new set of reference genes for normalization of real-time RT-PCR data of porcine backfat and longissimus dorsi muscle, and evaluation with PPARGC1A.Q31065099
Discovering biomarkers from gene expression data for predicting cancer subgroups using neural networks and relational fuzzy clusteringQ31090173
Identification of new reference genes for the normalisation of canine osteoarthritic joint tissue transcripts from microarray dataQ31119660
Selection of reference genes for quantitative RT-PCR studies in striped dolphin (Stenella coeruleoalba) skin biopsiesQ33258052
Selection of reference genes for gene expression studies in pig tissues using SYBR green qPCR.Q33294134
Evidence based selection of housekeeping genesQ33299463
Quantitative real-time RT-PCR--a perspective.Q34426536
Pitfalls of quantitative real-time reverse-transcription polymerase chain reactionQ35872589
Real-time RT-PCR normalisation; strategies and considerations.Q36091282
Analysis of global mRNA expression in human skeletal muscle during recovery from endurance exerciseQ38324308
Effects of creatine supplementation on housekeeping genes in human skeletal muscle using real-time RT-PCR.Q39124065
Real-time RT-PCR analysis of housekeeping genes in human skeletal muscle following acute exercise.Q39128464
Comparison of GH, IGF-I, and testosterone with mRNA of receptors and myostatin in skeletal muscle in older men.Q39585476
Effects of Histone Deacetylase Inhibitor (HDACi); Trichostatin-A (TSA) on the expression of housekeeping genesQ40344100
Properties of the reverse transcription reaction in mRNA quantificationQ40598910
Effect of experimental treatment on housekeeping gene expression: validation by real-time, quantitative RT-PCR.Q42833946
Hypoxia in vivo decreases peroxisome proliferator-activated receptor alpha-regulated gene expression in rat heartQ43732000
Sensitivity and accuracy of quantitative real-time polymerase chain reaction using SYBR green I depends on cDNA synthesis conditionsQ44076891
P304page(s)79
P577publication date2008-09-11
P1433published inBMC Molecular BiologyQ15760954
P1476titleEvaluation of suitable reference genes for gene expression studies in bovine muscular tissue
P478volume9

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cites work (P2860)
Q50520280An ultra fast detection method reveals strain-induced Ca(2+) entry via TRPV2 in alveolar type II cells.
Q35857233Characterization of bovine induced pluripotent stem cells by lentiviral transduction of reprogramming factor fusion proteins
Q44781197Determination and validation of reference gene stability for qPCR analysis in polysaccharide hydrogel-based 3D chondrocytes and mesenchymal stem cell cultural models.
Q33733866Dietary inulin supplementation modifies significantly the liver transcriptomic profile of broiler chickens.
Q36953314Effect of Helicobacter pylori on NFKB1, p38α and TNF-α mRNA expression levels in human gastric mucosa
Q34331441Effects of gene therapy on muscle 18S rRNA expression in mouse model of ALS.
Q33758905Escherichia coli infection induces distinct local and systemic transcriptome responses in the mammary gland
Q54268285Evaluating suitable internal control genes for transcriptional studies in heat-stressed mammary explants of buffaloes.
Q36071707Evaluation of Reference Genes for Reverse Transcription Quantitative PCR Studies of Physiological Responses in the Ghost Moth, Thitarodes armoricanus (Lepidoptera, Hepialidae)
Q33711024Evaluation of endogenous references for gene expression profiling in different tissues of the oriental fruit fly Bactrocera dorsalis (Diptera: Tephritidae)
Q33507167Evaluation of putative reference genes for gene expression normalization in soybean by quantitative real-time RT-PCR.
Q45329227Evaluation of suitable reference gene for real-time PCR in human umbilical cord mesenchymal stem cells with long-term in vitro expansion
Q54402561Genes associated with long-chain omega-3 fatty acids in bovine skeletal muscle.
Q33396365Genomic selection of reference genes for real-time PCR in human myocardium
Q33464716Identification and validation of housekeeping genes in brains of the desert locust Schistocerca gregaria under different developmental conditions
Q35361797Identification of Appropriate Reference Genes for qRT-PCR Analysis of Heat-Stressed Mammary Epithelial Cells in Riverine Buffaloes (Bubalus bubalis)
Q35644809Identification of Suitable Reference Genes for Real Time Quantitative Polymerase Chain Reaction Assays on Pectoralis major Muscle in Chicken (Gallus gallus ).
Q58712800Identification of endogenous normalizing genes for expression studies in inguinal ring tissue for scrotal hernias in pigs
Q44933700Identification of internal control genes for quantitative expression analysis by real-time PCR in bovine peripheral lymphocytes.
Q40112651Identification of internal control genes in milk-derived mammary epithelial cells during lactation cycle of Indian zebu cow.
Q90250087Identification of stable reference genes for lipopolysaccharide-stimulated macrophage gene expression studies
Q38908731Identification of stable reference genes for quantitative PCR in cells derived from chicken lymphoid organs.
Q34132923Identification of valid endogenous control genes for determining gene expression in human glioma
Q33362558Identifying Stable Reference Genes for qRT-PCR Normalisation in Gene Expression Studies of Narrow-Leafed Lupin (Lupinus angustifolius L.).
Q41980760Promoter variant-dependent mRNA expression of the MEF2A in longissimus dorsi muscle in cattle
Q33883974Reference gene screening for analyzing gene expression across goat tissue
Q89574681Reference gene selection and myosin heavy chain (MyHC) isoform expression in muscle tissues of domestic yak (Bos grunniens)
Q44831716Reference gene selection for quantitative real-time PCR in Chrysanthemum subjected to biotic and abiotic stress
Q34542374Reference gene selection for quantitative real-time PCR normalization in Caragana intermedia under different abiotic stress conditions
Q33525390Reference genes for normalising gene expression data in collagenase-induced rat intracerebral haemorrhage
Q60907823Screening of reference genes in real-time PCR for Radopholus similis
Q33699832Selection and assessment of reference genes for quantitative PCR normalization in migratory locust Locusta migratoria (Orthoptera: Acrididae).
Q111347068Selection and evaluation of reference genes for quantitative gene expression studies in cotton bollworm, Helicoverpa armigera (Lepidoptera: Noctuidae)
Q36316325Selection and validation of reference genes for qRT-PCR analysis during biological invasions: The thermal adaptability of Bemisia tabaci MED.
Q39625140Selection of internal reference genes for normalization of quantitative reverse transcription polymerase chain reaction (qRT-PCR) analysis in the canine brain and other organs
Q35203101Selection of reference genes for gene expression studies related to intramuscular fat deposition in Capra hircus skeletal muscle
Q54341031Somatotropic gene response to recombinant growth hormone treatment in buffalo leucocytes.
Q30639658Stability of reference genes for normalization of reverse transcription quantitative real-time PCR (RT-qPCR) data in bovine blastocysts produced by IVF, ICSI and SCNT.
Q90473472Stable reference genes for expression studies in breast muscle of normal and white striping-affected chickens
Q41536477The Ca2+ influx through the mammalian skeletal muscle dihydropyridine receptor is irrelevant for muscle performance.
Q41995342The Renilla luciferase gene as a reference gene for normalization of gene expression in transiently transfected cells
Q42679128The effect of Bu Zhong Yi Qi decoction on simulated weightlessness‑induced muscle atrophy and its mechanisms
Q48263089Transient receptor potential melastatin 2 expression is increased following experimental traumatic brain injury in rats.
Q42998057Validation of endogenous reference genes for RT-qPCR normalisation in bovine lymphoid cells (BL-3) infected with Bovine Viral Diarrhoea Virus (BVDV).
Q33525408Validation of reference genes for quantitative RT-PCR studies of gene expression in perennial ryegrass (Lolium perenne L.)
Q40139328Validation of reference transcripts in strawberry (Fragaria spp.).
Q33509627Validation of suitable house keeping genes for hypoxia-cultured human chondrocytes
Q54330277Widespread expression of SAA and Hp RNA in bovine tissues after evaluation of suitable reference genes.

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