Excess of non-conservative amino acid changes in marine bacterioplankton lineages with reduced genomes.

scientific article published on 12 June 2017

Excess of non-conservative amino acid changes in marine bacterioplankton lineages with reduced genomes. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1038/NMICROBIOL.2017.91
P698PubMed publication ID28604700

P50authorRamunas StepanauskasQ37617812
Haiwei LuoQ88291859
Jijun TangQ88291862
P2093author name stringYongjie Huang
P2860cites workComparative and phylogenomic evidence that the alphaproteobacterium HIMB59 is not a member of the oceanic SAR11 cladeQ21559544
The SAR11 group of alpha-proteobacteria is not related to the origin of mitochondriaQ21560877
Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiationQ21994463
Accelerated evolution associated with genome reduction in a free-living prokaryoteQ21999766
Genome Streamlining in a Cosmopolitan Oceanic BacteriumQ22065795
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tRNA signatures reveal a polyphyletic origin of SAR11 strains among alphaproteobacteriaQ28658469
The Black Queen Hypothesis: evolution of dependencies through adaptive gene lossQ28730844
Genomes of diverse isolates of the marine cyanobacterium ProchlorococcusQ30648262
Correlation between genome reduction and bacterial growth.Q30831245
Distinct, ecotype-specific genome and proteome signatures in the marine cyanobacteria ProchlorococcusQ33530539
Single-cell genomics reveal low recombination frequencies in freshwater bacteria of the SAR11 cladeQ33741813
Single-cell enabled comparative genomics of a deep ocean SAR11 bathytypeQ33801668
Evolutionary analysis of a streamlined lineage of surface ocean RoseobactersQ33801686
Reduced selective constraint in endosymbionts: elevation in radical amino acid replacements occurs genome-wideQ34110512
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Mutators, population size, adaptive landscape and the adaptation of asexual populations of bacteriaQ34607018
Widespread purifying selection at polymorphic sites in human protein-coding lociQ34791432
Genome reduction by deletion of paralogs in the marine cyanobacterium ProchlorococcusQ35468581
The significance of nitrogen cost minimization in proteomes of marine microorganismsQ35634602
Ocean plankton. Structure and function of the global ocean microbiomeQ35638921
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Endosymbiont evolution: predictions from theory and surprises from genomesQ36143177
Rate and molecular spectrum of spontaneous mutations in the bacterium Escherichia coli as determined by whole-genome sequencing.Q36339832
Implications of streamlining theory for microbial ecologyQ36756338
Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface oceanQ37010628
Background Mutational Features of the Radiation-Resistant Bacterium Deinococcus radioduransQ37229362
More radical amino acid replacements in primates than in rodents: support for the evolutionary role of effective population sizeQ37252766
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Losing Complexity: The Role of Simplification in MacroevolutionQ38841444
Evolutionary origin of a streamlined marine bacterioplankton lineageQ40870401
Positive Darwinian selection promotes charge profile diversity in the antigen-binding cleft of class I major-histocompatibility-complex moleculesQ41220332
Biochemical basis for whole-cell uptake kinetics: specific affinity, oligotrophic capacity, and the meaning of the michaelis constantQ42926370
Reductive genome evolution at both ends of the bacterial population size spectrum.Q46838890
Single-cell genomics reveals hundreds of coexisting subpopulations in wild Prochlorococcus.Q46901842
Comparing effective population sizes of dominant marine alphaproteobacteria lineagesQ46923684
Are radical and conservative substitution rates useful statistics in molecular evolution?Q47281908
The spontaneous mutation frequencies of Prochlorococcus strains are commensurate with those of other bacteria.Q50913027
Niche partitioning among Prochlorococcus ecotypes along ocean-scale environmental gradients.Q51242132
Indispensability of Horizontally Transferred Genes and Its Impact on Bacterial Genome Streamlining.Q51561384
Role of mutator alleles in adaptive evolution.Q54564129
Evolutionary Divergence and Convergence in ProteinsQ56689213
Quantifying the Slightly Deleterious Mutation Model of Molecular EvolutionQ57675399
Processes and patterns of oceanic nutrient limitationQ58054928
A Neoproterozoic Transition in the Marine Nitrogen CycleQ58074666
Rates of conservative and radical nonsynonymous nucleotide substitutions in mammalian nuclear genesQ73400097
Mutation rate and genome reduction in endosymbiotic and free-living bacteriaQ80114206
Molecular Evolutionary GeneticsQ104203812
P407language of work or nameEnglishQ1860
P921main subjectbacterioplanktonQ671626
P304page(s)17091
P577publication date2017-06-12
P1433published inNature MicrobiologyQ23022567
P1476titleExcess of non-conservative amino acid changes in marine bacterioplankton lineages with reduced genomes
P478volume2

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cites work (P2860)
Q48250962Carbon limitation drives GC content evolution of a marine bacterium in an individual-based genome-scale model.
Q58770246Genome rearrangement shapes ecological adaptation
Q58762760Hydrothermal-derived carbon as a stabilizing matrix for improved cycling performance of silicon-based anodes for lithium-ion full cells
Q90027266Molecular Evolution in Small Steps under Prevailing Negative Selection: A Nearly Universal Rule of Codon Substitution
Q90894026Niche-directed evolution modulates genome architecture in freshwater Planctomycetes
Q55092514Pangenomic Definition of Prokaryotic Species and the Phylogenetic Structure of Prochlorococcus spp.
Q58725893Parallel Evolution of Genome Streamlining and Cellular Bioenergetics across the Marine Radiation of a Bacterial Phylum
Q90188936Strong Purifying Selection Is Associated with Genome Streamlining in Epipelagic Marinimicrobia
Q61448433Trophic Specialization Results in Genomic Reduction in Free-Living Marine Bacteria

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