Dependency of Heterochromatin Domains on Replication Factors.

scientific article published on 29 November 2017

Dependency of Heterochromatin Domains on Replication Factors. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1534/G3.117.300341
P932PMC publication ID5919735
P698PubMed publication ID29187422

P50authorGeneviève ThonQ69750256
Leonie Johanna JahnQ89436355
P2093author name stringBethany Mason
Peter Brøgger
Tea Toteva
Dennis Kim Nielsen
P2860cites workSynergy between sequence and size in Large-scale genomicsQ22122020
Regulation of chromatin structure by site-specific histone H3 methyltransferasesQ24290115
DNA damage induces Cdt1 proteolysis in fission yeast through a pathway dependent on Cdt2 and Ddb1Q24672982
Evolutionary-conserved telomere-linked helicase genes of fission yeast are repressed by silencing factors, RNAi components and the telomere-binding protein Taz1Q25257059
A Ctf4 trimer couples the CMG helicase to DNA polymerase α in the eukaryotic replisome.Q27683670
Def1 promotes the degradation of Pol3 for polymerase exchange to occur during DNA-damage--induced mutagenesis in Saccharomyces cerevisiaeQ27930388
Proline isomerization of histone H3 regulates lysine methylation and gene expressionQ27933713
GINS maintains association of Cdc45 with MCM in replisome progression complexes at eukaryotic DNA replication forksQ27934889
Regulation of budding yeast mating-type switching donor preference by the FHA domain of Fkh1Q27936144
Forkhead transcription factors establish origin timing and long-range clustering in S. cerevisiaeQ27938701
Establishment of sister chromatid cohesion at the S. cerevisiae replication forkQ27939134
Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAiQ28218870
Polymerase δ replicates both strands after homologous recombination-dependent fork restartQ28268105
A Rik1-associated, cullin-dependent E3 ubiquitin ligase is essential for heterochromatin formationQ28769568
Tethering of SCF(Dia2) to the Replisome Promotes Efficient Ubiquitylation and Disassembly of the CMG Helicase.Q30663149
ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombeQ33249032
A DNA polymerase alpha accessory protein, Mcl1, is required for propagation of centromere structures in fission yeastQ33336581
Mapping epigenetic mutations in fission yeast using whole-genome next-generation sequencingQ33441157
GCN5 is a positive regulator of origins of DNA replication in Saccharomyces cerevisiaeQ33529002
Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe.Q33579032
The Cohesin Release Factor WAPL Restricts Chromatin Loop ExtensionQ33649701
Global effects on gene expression in fission yeast by silencing and RNA interference machineries.Q33694831
Mcl1p is a polymerase alpha replication accessory factor important for S-phase DNA damage survivalQ33718702
H3K9me-independent gene silencing in fission yeast heterochromatin by Clr5 and histone deacetylases.Q33799141
An N-ethyl-N-nitrosourea screen for genes involved in variegation in the mouseQ33836232
The FUN30 chromatin remodeler, Fft3, protects centromeric and subtelomeric domains from euchromatin formationQ33855659
RNAi and heterochromatin repress centromeric meiotic recombinationQ33928327
Fission yeast F-box protein Pof3 is required for genome integrity and telomere function.Q33953355
The clr1 locus regulates the expression of the cryptic mating-type loci of fission yeastQ33959489
Three additional linkage groups that repress transcription and meiotic recombination in the mating-type region of Schizosaccharomyces pombeQ33963561
A role for DNA polymerase alpha in epigenetic control of transcriptional silencing in fission yeastQ34079851
mcl1+, the Schizosaccharomyces pombe homologue of CTF4, is important for chromosome replication, cohesion, and segregationQ34100729
Rif1 is a global regulator of timing of replication origin firing in fission yeastQ34249766
Mutations derepressing silent centromeric domains in fission yeast disrupt chromosome segregation.Q34318276
Telomere-associated chromosome breakage in fission yeast results in variegated expression of adjacent genesQ34332700
A systematic genetic screen identifies new factors influencing centromeric heterochromatin integrity in fission yeastQ34441358
Coordinated degradation of replisome components ensures genome stability upon replication stress in the absence of the replication fork protection complexQ34561912
The Clr7 and Clr8 directionality factors and the Pcu4 cullin mediate heterochromatin formation in the fission yeast Schizosaccharomyces pombeQ34586818
Histone Deacetylase Homologs Regulate Epigenetic Inheritance of Transcriptional Silencing and Chromosome Segregation in Fission YeastQ34605496
Localization and properties of a silencing element near the mat3-M mating-type cassette of Schizosaccharomyces pombe.Q34606495
Role for Cohesin in the Formation of a Heterochromatic Domain at Fission Yeast SubtelomeresQ34742174
Rif1 regulates initiation timing of late replication origins throughout the S. cerevisiae genomeQ35176804
Cohesin-dependent globules and heterochromatin shape 3D genome architecture in S. pombeQ35737747
Role of Ccr4-Not complex in heterochromatin formation at meiotic genes and subtelomeres in fission yeastQ35954431
Swi1Timeless Prevents Repeat Instability at Fission Yeast Telomeres.Q35962436
Mmi1 RNA surveillance machinery directs RNAi complex RITS to specific meiotic genes in fission yeastQ36000122
Telomere-binding protein Taz1 controls global replication timing through its localization near late replication origins in fission yeastQ36240918
Abo1, a conserved bromodomain AAA-ATPase, maintains global nucleosome occupancy and organisation.Q36478645
Mrc1 is required for sister chromatid cohesion to aid in recombination repair of spontaneous damageQ36701199
The Cul4-Ddb1Cdt2 Ubiquitin Ligase Inhibits Invasion of a Boundary-Associated Antisilencing Factor into HeterochromatinQ36819834
SHREC Silences Heterochromatin via Distinct Remodeling and Deacetylation ModulesQ36961087
Position-Effect Variegation, Heterochromatin Formation, and Gene Silencing in DrosophilaQ37040262
Proteasome-mediated processing of Def1, a critical step in the cellular response to transcription stressQ37187541
Subnuclear relocalization and silencing of a chromosomal region by an ectopic ribosomal DNA repeat.Q37340740
Brc1 links replication stress response and centromere functionQ38105192
Proteasome-dependent degradation of replisome components regulates faithful DNA replicationQ38125901
Coordination of DNA replication and histone modification by the Rik1-Dos2 complexQ38267644
H3K9me3-Dependent Heterochromatin: Barrier to Cell Fate Changes.Q38671298
Multiple pathways can bypass the essential role of fission yeast Hsk1 kinase in DNA replication initiationQ38909131
Interactions between Swi1-Swi3, Mrc1 and S phase kinase, Hsk1 may regulate cellular responses to stalled replication forks in fission yeastQ39574453
Ctf4 Is a Hub in the Eukaryotic Replisome that Links Multiple CIP-Box Proteins to the CMG HelicaseQ39616391
γH2A-Binding Protein Brc1 Affects Centromere Function in Fission YeastQ39790559
Cop9/signalosome subunits and Pcu4 regulate ribonucleotide reductase by both checkpoint-dependent and -independent mechanismsQ39895340
Swi1 and Swi3 are components of a replication fork protection complex in fission yeast.Q39998656
Role of the fission yeast SUMO E3 ligase Pli1p in centromere and telomere maintenance.Q40197403
Hsk1- and SCF(Pof3)-dependent proteolysis of S. pombe Ams2 ensures histone homeostasis and centromere functionQ40867363
Chromatin Controls DNA Replication Origin Selection, Lagging-Strand Synthesis, and Replication Fork RatesQ41072300
How the Eukaryotic Replisome Achieves Rapid and Efficient DNA Replication.Q41072353
RFCCtf18 and the Swi1-Swi3 complex function in separate and redundant pathways required for the stabilization of replication forks to facilitate sister chromatid cohesion in Schizosaccharomyces pombe.Q41819504
Expression-state boundaries in the mating-type region of fission yeast.Q41948193
Mutations in rik1, clr2, clr3 and clr4 genes asymmetrically derepress the silent mating-type loci in fission yeastQ42004563
Fission yeast mutants that alleviate transcriptional silencing in centromeric flanking repeats and disrupt chromosome segregationQ42047290
Ctf4 Links DNA Replication with Sister Chromatid Cohesion Establishment by Recruiting the Chl1 Helicase to the ReplisomeQ42127466
F-box-directed CRL complex assembly and regulation by the CSN and CAND1Q42150408
Establishment of expression-state boundaries by Rif1 and Taz1 in fission yeastQ42158675
RNAi promotes heterochromatic silencing through replication-coupled release of RNA Pol II.Q42228801
Rif1 regulates the replication timing domains on the human genomeQ42325272
Four chromo-domain proteins of Schizosaccharomyces pombe differentially repress transcription at various chromosomal locations.Q42553808
Switching gene swi6, involved in repression of silent mating-type loci in fission yeast, encodes a homologue of chromatin-associated proteins from Drosophila and mammalsQ42606894
Phosphorylation of Swi6/HP1 regulates transcriptional gene silencing at heterochromatinQ43192411
RNAi-independent heterochromatin nucleation by the stress-activated ATF/CREB family proteinsQ44952131
Eukaryotic replisome components cooperate to process histones during chromosome replication.Q46019018
Genetic and physical interactions between Schizosaccharomyces pombe Mcl1 and Rad2, Dna2 and DNA polymerase alpha: evidence for a multifunctional role of Mcl1 in DNA replication and repair.Q46509031
Two novel proteins, dos1 and dos2, interact with rik1 to regulate heterochromatic RNA interference and histone modificationQ46696541
Accumulation of RNA on chromatin disrupts heterochromatic silencingQ49576014
Taz1-Shelterin Promotes Facultative Heterochromatin Assembly at Chromosome-Internal Sites Containing Late Replication Origins.Q51719045
The chromatin-remodeling factor FACT contributes to centromeric heterochromatin independently of RNAi.Q53542693
A cullin E3 ubiquitin ligase complex associates with Rik1 and the Clr4 histone H3-K9 methyltransferase and is required for RNAi-mediated heterochromatin formationQ53587538
Synthetic Genetic Array (SGA) Analysis in Saccharomyces cerevisiae and Schizosaccharomyces pombeQ56994328
SHREC, an effector complex for heterochromatic transcriptional silencingQ79749446
Distinct roles of HDAC complexes in promoter silencing, antisense suppression and DNA damage protectionQ80195998
Fission yeast Mcl1 interacts with SCF(Pof3) and is required for centromere formationQ80334271
Telomere binding protein Taz1 establishes Swi6 heterochromatin independently of RNAi at telomeresQ81389440
The amino-terminal TPR domain of Dia2 tethers SCF(Dia2) to the replisome progression complexQ84901617
Switching genes in Schizosaccharomyces pombeQ87653119
P433issue2
P304page(s)477-489
P577publication date2018-02-02
P1433published inG3Q5512701
P1476titleDependency of Heterochromatin Domains on Replication Factors
P478volume8

Reverse relations

cites work (P2860)
Q64114668A DNA repair protein and histone methyltransferase interact to promote genome stability in the Caenorhabditis elegans germ line
Q90424392Chromatin remodeler Fft3 plays a dual role at blocked DNA replication forks
Q55433216Chromosomal barcoding as a tool for multiplexed phenotypic characterization of laboratory evolved lineages.
Q64122479Deletion of the DEF1 gene does not confer UV-immutability but frequently leads to self-diploidization in yeast Saccharomyces cerevisiae
Q54977542New insights into donor directionality of mating-type switching in Schizosaccharomyces pombe
Q90293412Nucleosome Remodeling by Fun30SMARCAD1 in the DNA Damage Response

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