Clustered Regularly Interspaced Short Palindromic Repeat (CRISPR) RNAs in the Porphyromonas gingivalis CRISPR-Cas I-C System.

scientific article published on 11 September 2017

Clustered Regularly Interspaced Short Palindromic Repeat (CRISPR) RNAs in the Porphyromonas gingivalis CRISPR-Cas I-C System. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1128/JB.00275-17
P932PMC publication ID5686588
P698PubMed publication ID28893837

P50authorJose Ignacio Rodriguez MartinezQ85217349
Dominika StaniecQ114446889
Krzysztof PyrćQ37610719
P2093author name stringMichal Burmistrz
Daniel Krochmal
P2860cites workOpenCFU, a new free and open-source software to count cell colonies and other circular objectsQ21090811
CRISPR-Cas systems in the cyanobacterium Synechocystis sp. PCC6803 exhibit distinct processing pathways involving at least two Cas6 and a Cmr2 proteinQ21133677
Evolutionary conservation of sequence and secondary structures in CRISPR repeatsQ21184123
The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeatsQ21284230
Mfold web server for nucleic acid folding and hybridization predictionQ24498105
A Programmable Dual-RNA-Guided DNA Endonuclease in Adaptive Bacterial ImmunityQ24669850
Complete genome sequence of the oral pathogenic Bacterium porphyromonas gingivalis strain W83Q24682539
CRISPR interference: a structural perspectiveQ26824296
Cas6 is an endoribonuclease that generates guide RNAs for invader defense in prokaryotesQ27653417
Structural and Functional Characterization of an Archaeal Clustered Regularly Interspaced Short Palindromic Repeat (CRISPR)-associated Complex for Antiviral Defense (CASCADE)Q27667493
Cas5d Protein Processes Pre-crRNA and Assembles into a Cascade-like Interference Complex in Subtype I-C/Dvulg CRISPR-Cas SystemQ27670930
Mechanism of Foreign DNA Selection in a Bacterial Adaptive Immune SystemQ27678641
Conservation and variability in the structure and function of the Cas5d endoribonuclease in the CRISPR-mediated microbial immune systemQ27684189
Clustal W and Clustal X version 2.0Q27860517
Microbial complexes in subgingival plaqueQ38553206
Characterization of CRISPR RNA processing in Clostridium thermocellum and Methanococcus maripaludisQ41995245
CRISPR immunity relies on the consecutive binding and degradation of negatively supercoiled invader DNA by Cascade and Cas3Q42128481
Aspiration pneumonia: dental and oral risk factors in an older veteran populationQ45334314
Genetic manipulation of Porphyromonas gingivalis.Q54686173
Small CRISPR RNAs guide antiviral defense in prokaryotesQ28290898
CRISPRmap: an automated classification of repeat conservation in prokaryotic adaptive immune systemsQ28679191
RNA-guided RNA cleavage by a CRISPR RNA-Cas protein complexQ29615785
Identification of genes that are associated with DNA repeats in prokaryotesQ29615790
Evolution and classification of the CRISPR-Cas systemsQ29616645
Expression of Porphyromonas gingivalis small RNA in response to hemin availability identified using microarray and RNA-seq analysisQ33564962
Self versus non-self discrimination during CRISPR RNA-directed immunity.Q33620668
An updated evolutionary classification of CRISPR-Cas systemsQ33660852
CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bacteriophage DNA, and provide additional tools for evolutionary studies.Q33985645
Structural basis for CRISPR RNA-guided DNA recognition by CascadeQ34175461
Interference by clustered regularly interspaced short palindromic repeat (CRISPR) RNA is governed by a seed sequenceQ34190309
Mature clustered, regularly interspaced, short palindromic repeats RNA (crRNA) length is measured by a ruler mechanism anchored at the precursor processing siteQ34240056
Essential features and rational design of CRISPR RNAs that function with the Cas RAMP module complex to cleave RNAs.Q34245546
Proteins and DNA elements essential for the CRISPR adaptation process in Escherichia coliQ34259727
CRISPR-spacer integration reporter plasmids reveal distinct genuine acquisition specificities among CRISPR-Cas I-E variants of Escherichia coliQ34330105
The CRISPRs, they are a-changin': how prokaryotes generate adaptive immunityQ34645309
The American Journal of Cardiology and Journal of Periodontology Editors' Consensus: periodontitis and atherosclerotic cardiovascular diseaseQ34990556
Functional Analysis of Porphyromonas gingivalis W83 CRISPR-Cas Systems.Q35865998
Diversity and evolution of class 2 CRISPR-Cas systemsQ36256836
Cas5d processes pre-crRNA and is a member of a larger family of CRISPR RNA endonucleasesQ36342243
Gingipains: Critical Factors in the Development of Aspiration Pneumonia Caused by Porphyromonas gingivalisQ36711718
Processing-independent CRISPR RNAs limit natural transformation in Neisseria meningitidisQ36959817
CRISPR regulation of intraspecies diversification by limiting IS transposition and intercellular recombination.Q36974641
A ruler protein in a complex for antiviral defense determines the length of small interfering CRISPR RNAsQ37201214
DNA Targeting by a Minimal CRISPR RNA-Guided CascadeQ37418237
Periodontitis in systemic rheumatic diseasesQ37428747
Is the prevalence of periodontitis in the USA in decline?Q37456995
P433issue23
P407language of work or nameEnglishQ1860
P921main subjectCRISPRQ412563
Porphyromonas gingivalisQ3214147
P577publication date2017-10-31
P1433published inJournal of BacteriologyQ478419
P1476titleClustered Regularly Interspaced Short Palindromic Repeat (CRISPR) RNAs in the Porphyromonas gingivalis CRISPR-Cas I-C System
P478volume199

Reverse relations

cites work (P2860)
Q92269691CRISPR-Cas in Streptococcus pyogenes
Q91866569Porphyromonas gingivalis and its CRISPR-Cas system
Q89659346RNA-Targeting CRISPR-Cas Systems and Their Applications

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