scholarly article | Q13442814 |
P356 | DOI | 10.1021/PR070542G |
P698 | PubMed publication ID | 18159924 |
P50 | author | Alexey I. Nesvizhskii | Q37382438 |
Choi Hyungwon | Q56801152 | ||
P433 | issue | 1 | |
P304 | page(s) | 254-265 | |
P577 | publication date | 2007-12-27 | |
P1433 | published in | Journal of Proteome Research | Q3186939 |
P1476 | title | Semisupervised model-based validation of peptide identifications in mass spectrometry-based proteomics. | |
P478 | volume | 7 |
Q49733277 | A Multivariate Mixture Model to Estimate the Accuracy of Glycosaminoglycan Identifications Made by Tandem Mass Spectrometry (MS/MS) and Database Search |
Q34486815 | A cross-validation scheme for machine learning algorithms in shotgun proteomics |
Q30497827 | A guided tour of the Trans-Proteomic Pipeline |
Q36717216 | A novel algorithm for validating peptide identification from a shotgun proteomics search engine |
Q30653513 | A statistical approach to peptide identification from clustered tandem mass spectrometry data |
Q34486639 | A statistical model-building perspective to identification of MS/MS spectra with PeptideProphet |
Q34207316 | A survey of computational methods and error rate estimation procedures for peptide and protein identification in shotgun proteomics |
Q89582429 | A synthetic peptide library for benchmarking crosslinking-mass spectrometry search engines for proteins and protein complexes |
Q37097028 | Adaptive discriminant function analysis and reranking of MS/MS database search results for improved peptide identification in shotgun proteomics |
Q41894428 | Addressing statistical biases in nucleotide-derived protein databases for proteogenomic search strategies |
Q35844567 | An adaptive classification model for peptide identification |
Q33509207 | An automated proteomic data analysis workflow for mass spectrometry |
Q37228241 | An in-depth comparison of the male pediatric and adult urinary proteomes |
Q37113889 | Bayesian nonparametric model for the validation of peptide identification in shotgun proteomics |
Q30381459 | Beyond the E-Value: Stratified Statistics for Protein Domain Prediction. |
Q37160902 | Combining results of multiple search engines in proteomics |
Q34145620 | Computational and statistical analysis of protein mass spectrometry data |
Q39015907 | Crescendo: A Protein Sequence Database Search Engine for Tandem Mass Spectra |
Q36345578 | Detection of locally over-represented GO terms in protein-protein interaction networks |
Q34242995 | Development of a pharmaceutical hepatotoxicity biomarker panel using a discovery to targeted proteomics approach. |
Q35751671 | Direct maximization of protein identifications from tandem mass spectra |
Q36566409 | Effective Leveraging of Targeted Search Spaces for Improving Peptide Identification in Tandem Mass Spectrometry Based Proteomics |
Q33515901 | Elective affinities--bioinformatic analysis of proteomic mass spectrometry data |
Q33607524 | IDPicker 2.0: Improved protein assembly with high discrimination peptide identification filtering |
Q34220314 | Identifying and quantifying proteolytic events and the natural N terminome by terminal amine isotopic labeling of substrates |
Q33467081 | Improved results in proteomics by use of local and peptide-class specific false discovery rates |
Q37097041 | Improved sequence tag generation method for peptide identification in tandem mass spectrometry |
Q33433611 | Improvements to the percolator algorithm for Peptide identification from shotgun proteomics data sets |
Q51636013 | Improving the sensitivity of MASCOT search results validation by combining new features with Bayesian nonparametric model |
Q36399003 | Inference and quantification of peptidoforms in large sample cohorts by SWATH-MS. |
Q28485320 | Learning from decoys to improve the sensitivity and specificity of proteomics database search results |
Q42324063 | Learning score function parameters for improved spectrum identification in tandem mass spectrometry experiments |
Q34983181 | Liquid Chromatography Mass Spectrometry-Based Proteomics: Biological and Technological Aspects |
Q35083919 | MSblender: A probabilistic approach for integrating peptide identifications from multiple database search engines |
Q39539285 | Membrane proteomic signatures of karyotypically normal and abnormal human embryonic stem cell lines and derivatives |
Q34635051 | MixGF: spectral probabilities for mixture spectra from more than one peptide |
Q37027481 | Modes of inference for evaluating the confidence of peptide identifications |
Q42005545 | Non-parametric estimation of posterior error probabilities associated with peptides identified by tandem mass spectrometry |
Q42912173 | Nonparametric Bayesian evaluation of differential protein quantification |
Q40741382 | On using samples of known protein content to assess the statistical calibration of scores assigned to peptide-spectrum matches in shotgun proteomics |
Q47660956 | Onco-proteogenomics: Multi-omics level data integration for accurate phenotype prediction |
Q30994995 | Optimization of Search Engines and Postprocessing Approaches to Maximize Peptide and Protein Identification for High-Resolution Mass Data |
Q43700983 | PepDistiller: A quality control tool to improve the sensitivity and accuracy of peptide identifications in shotgun proteomics |
Q35101937 | Peptide identification based on fuzzy classification and clustering |
Q33356312 | Peptizer, a tool for assessing false positive peptide identifications and manually validating selected results |
Q28553325 | Performance Investigation of Proteomic Identification by HCD/CID Fragmentations in Combination with High/Low-Resolution Detectors on a Tribrid, High-Field Orbitrap Instrument |
Q34600986 | Protein analysis by shotgun/bottom-up proteomics |
Q37988996 | Protein inference: a review. |
Q39559559 | Proteomic analysis of Taenia solium metacestode excretion-secretion proteins |
Q28714165 | Proteomic characterization of phagosomal membrane microdomains during phagolysosome biogenesis and evolution |
Q57909981 | Quality assessments of peptide-spectrum matches in shotgun proteomics |
Q37294428 | Rapid validation of Mascot search results via stable isotope labeling, pair picking, and deconvolution of fragmentation patterns |
Q38311018 | Spectral counting assessment of protein dynamic range in cerebrospinal fluid following depletion with plasma-designed immunoaffinity columns |
Q38616270 | Statistical control of peptide and protein error rates in large-scale targeted data-independent acquisition analyses |
Q38893673 | Tandem mass spectral libraries of peptides and their roles in proteomics research |
Q92827069 | Target-small decoy search strategy for false discovery rate estimation |
Q39600377 | The endosomal proteome of macrophage and dendritic cells |
Q35650544 | The mzqLibrary--An open source Java library supporting the HUPO-PSI quantitative proteomics standard. |
Q36493285 | The reactivity of human serum albumin toward trans-4-hydroxy-2-nonenal. |
Q94517802 | Transfer posterior error probability estimation for peptide identification |
Q34762048 | Use of expressed sequence tags as an alternative approach for the identification of Taenia solium metacestode excretion/secretion proteins |
Q36329329 | Using the entrapment sequence method as a standard to evaluate key steps of proteomics data analysis process |
Q34141742 | Utility of RNA-seq and GPMDB protein observation frequency for improving the sensitivity of protein identification by tandem MS |
Q34005153 | iProphet: multi-level integrative analysis of shotgun proteomic data improves peptide and protein identification rates and error estimates |
Q33851184 | mProphet: automated data processing and statistical validation for large-scale SRM experiments |
Search more.