Biochemical and mutational analysis of EcoRII functional domains reveals evolutionary links between restriction enzymes.

scientific article published on 17 February 2006

Biochemical and mutational analysis of EcoRII functional domains reveals evolutionary links between restriction enzymes. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1016/J.FEBSLET.2006.02.010
P698PubMed publication ID16497303
P5875ResearchGate publication ID7280725

P50authorGintautas TamulaitisQ12655552
Virginijus ŠikšnysQ22202040
Merlind MuckeQ101542192
P2860cites workCrystal structure of the Bse634I restriction endonuclease: comparison of two enzymes recognizing the same DNA sequenceQ24514776
Structure of the metal-independent restriction enzyme BfiI reveals fusion of a specific DNA-binding domain with a nonspecific nucleaseQ24535057
Solution structure of the B3 DNA binding domain of the Arabidopsis cold-responsive transcription factor RAV1Q24558759
REBASE--restriction enzymes and DNA methyltransferasesQ24793693
MOLSCRIPT: a program to produce both detailed and schematic plots of protein structuresQ26778412
Structure of the tetrameric restriction endonuclease NgoMIV in complex with cleaved DNAQ27626779
Crystal structure of type IIE restriction endonuclease EcoRII reveals an autoinhibition mechanism by a novel effector-binding foldQ27642726
Raster3D: photorealistic molecular graphicsQ27860557
Type II restriction endonucleases: structure and mechanismQ34555997
Regions of endonuclease EcoRII involved in DNA target recognition identified by membrane-bound peptide repertoires.Q38328208
Oligonucleotide duplexes containing CC(A/T)GG stimulate cleavage of refractory DNA by restriction endonuclease EcoRII.Q38345031
PspGI, a type II restriction endonuclease from the extreme thermophile Pyrococcus sp.: structural and functional studies to investigate an evolutionary relationship with several mesophilic restriction enzymesQ38353751
The metal-independent type IIs restriction enzyme BfiI is a dimer that binds two DNA sites but has only one catalytic centreQ38357645
EcoRII: a restriction enzyme evolving recombination functions?Q38362416
Activation of restriction endonuclease EcoRII does not depend on the cleavage of stimulator DNA.Q40507377
Structure and function of restriction endonucleasesQ40540883
EcoRII can be activated to cleave refractory DNA recognition sitesQ40545771
Generation of the BfiI restriction endonuclease from the fusion of a DNA recognition domain to a non-specific nuclease from the phospholipase D superfamilyQ44740553
Conversion of the tetrameric restriction endonuclease Bse634I into a dimer: oligomeric structure-stability-function correlationsQ46422977
Cooperative binding properties of restriction endonuclease EcoRII with DNA recognition sites.Q52995430
Specific DNA recognition by EcoRV restriction endonuclease induced by calcium ions.Q54618527
Evolutionary relationship between different subgroups of restriction endonucleasesQ56900882
P433issue6
P407language of work or nameEnglishQ1860
P921main subjectmutational analysisQ1955810
P304page(s)1665-1671
P577publication date2006-02-17
P1433published inFEBS LettersQ1388051
P1476titleBiochemical and mutational analysis of EcoRII functional domains reveals evolutionary links between restriction enzymes.
P478volume580

Reverse relations

cites work (P2860)
Q42957725An Mrr-family nuclease motif in the single polypeptide restriction-modification enzyme LlaGI.
Q36959595Central base pair flipping and discrimination by PspGI.
Q42687145DNA cleavage by CgII and NgoAVII requires interaction between N- and R-proteins and extensive nucleotide hydrolysis
Q34298082DNA synapsis through transient tetramerization triggers cleavage by Ecl18kI restriction enzyme.
Q42052209Degenerate sequence recognition by the monomeric restriction enzyme: single mutation converts BcnI into a strand-specific nicking endonuclease.
Q43164516Functional significance of protein assemblies predicted by the crystal structure of the restriction endonuclease BsaWI.
Q43247619How PspGI, catalytic domain of EcoRII and Ecl18kI acquire specificities for different DNA targets
Q33723739Identification of new homologs of PD-(D/E)XK nucleases by support vector machines trained on data derived from profile-profile alignments
Q42262732In vitro reconstitution of Cascade-mediated CRISPR immunity in Streptococcus thermophilus.
Q38300220Nucleotide flipping by restriction enzymes analyzed by 2-aminopurine steady-state fluorescence
Q50882444Protein NCRII-18: the role of gene fusion in the molecular evolution of restriction endonucleases
Q39048699Restriction endonuclease AgeI is a monomer which dimerizes to cleave DNA
Q35130410Site-specific labeling of supercoiled DNA
Q27681332Structural insight into the specificity of the B3 DNA-binding domains provided by the co-crystal structure of the C-terminal fragment of BfiI restriction enzyme
Q27657299Structural mechanisms for the 5'-CCWGG sequence recognition by the N- and C-terminal domains of EcoRII
Q35001867Time-resolved fluorescence studies of nucleotide flipping by restriction enzymes.
Q33843093Type II restriction endonucleases--a historical perspective and more

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