EcoRII: a restriction enzyme evolving recombination functions?

scientific article

EcoRII: a restriction enzyme evolving recombination functions? is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1093/EMBOJ/CDF514
P932PMC publication ID129036
P698PubMed publication ID12356742
P5875ResearchGate publication ID11100279

P50authorRegine KraftQ114290107
P2093author name stringDetlev H Krüger
Joachim Behlke
Merlind Mücke
Monika Reuter
Gerlinde Grelle
P2860cites workCrystal structure of the Bse634I restriction endonuclease: comparison of two enzymes recognizing the same DNA sequenceQ24514776
Behavior of restriction-modification systems as selfish mobile elements and their impact on genome evolutionQ24555229
Structure and function of type II restriction endonucleasesQ24555230
Biology of DNA restrictionQ24634671
FokI dimerization is required for DNA cleavageQ24657843
Structure of FokI has implications for DNA cleavageQ24657897
Crystallographic and functional studies of very short patch repair endonucleaseQ27618500
Recognition of a TG mismatch: the crystal structure of very short patch repair endonuclease in complex with a DNA duplexQ27620825
Crystal structure of NaeI--an evolutionary bridge between DNA endonuclease and topoisomeraseQ27624935
Unexpected structural diversity in DNA recombination: the restriction endonuclease connectionQ27625490
Crystal structure of the Holliday junction resolving enzyme T7 endonuclease IQ27629114
Structure of NaeI-DNA complex reveals dual-mode DNA recognition and complete dimer rearrangementQ27633648
Sequence selectivity and degeneracy of a restriction endonuclease mediated by DNA intercalationQ27636803
Structure of the multimodular endonuclease FokI bound to DNAQ27740190
Asymmetric photocross-linking pattern of restriction endonuclease EcoRII to the DNA recognition sequenceQ31037795
Genetic variation: molecular mechanisms and impact on microbial evolutionQ33820587
Structural basis for MutH activation in E.coli mismatch repair and relationship of MutH to restriction endonucleasesQ33888460
Imaging DNA loops induced by restriction endonuclease EcoRII. A single amino acid substitution uncouples target recognition from cooperative DNA interaction and cleavageQ33910413
The structural basis of damaged DNA recognition and endonucleolytic cleavage for very short patch repair endonucleaseQ33941852
New functions from old scaffolds: how nature reengineers enzymes for new functionsQ34070084
REBASE--restriction enzymes and methylases.Q34323893
DNA and spermidine provide a switch mechanism to regulate the activity of restriction enzyme Nae I.Q34324777
Similarities and differences among 105 members of the Int family of site-specific recombinasesQ34652687
Changing endonuclease EcoRII Tyr308 to Phe abolishes cleavage but not recognition: possible homology with the Int-family of recombinasesQ34985243
The domain organization of NaeI endonuclease: separation of binding and catalysisQ36003818
Structural, functional, and evolutionary relationships between lambda-exonuclease and the type II restriction endonucleasesQ36163748
Identification of the endonuclease domain encoded by R2 and other site-specific, non-long terminal repeat retrotransposable elementsQ36407664
Functional domains in Fok I restriction endonuclease.Q37000625
Regions of endonuclease EcoRII involved in DNA target recognition identified by membrane-bound peptide repertoires.Q38328208
Hjc resolvase is a distantly related member of the type II restriction endonuclease familyQ39600879
The significance of distance and orientation of restriction endonuclease recognition sites in viral DNA genomes.Q40479056
Activation of restriction endonuclease EcoRII does not depend on the cleavage of stimulator DNA.Q40507377
EcoRII can be activated to cleave refractory DNA recognition sitesQ40545771
Cooperative binding properties of restriction endonuclease EcoRII with DNA recognition sites.Q52995430
Nucleotide-dependent complex formation between the Escherichia coli chaperonins GroEL and GroES studied under equilibrium conditions.Q53000457
Interaction of EcoRII endonuclease with DNA substrates containing single recognition sitesQ54261959
Evolutionary relationship between different subgroups of restriction endonucleasesQ56900882
Phylogeny of the restriction endonuclease-like superfamily inferred from comparison of protein structuresQ56901954
DNA topoisomerase and recombinase activities in Nae I restriction endonucleaseQ72635901
FokI requires two specific DNA sites for cleavageQ74326486
P433issue19
P407language of work or nameEnglishQ1860
P304page(s)5262-5268
P577publication date2002-10-01
P1433published inThe EMBO JournalQ1278554
P1476titleEcoRII: a restriction enzyme evolving recombination functions?
P478volume21

Reverse relations

cites work (P2860)
Q24800162A homology model of restriction endonuclease SfiI in complex with DNA
Q42587210Bacteriophage T4 endonuclease II, a promiscuous GIY-YIG nuclease, binds as a tetramer to two DNA substrates
Q53799380Biochemical and mutational analysis of EcoRII functional domains reveals evolutionary links between restriction enzymes.
Q40421023Direct monitoring of allosteric recognition of type IIE restriction endonuclease EcoRII.
Q40240500Diversity of type II restriction endonucleases that require two DNA recognition sites
Q33727287Genomic analysis and relatedness of P2-like phages of the Burkholderia cepacia complex
Q43247619How PspGI, catalytic domain of EcoRII and Ecl18kI acquire specificities for different DNA targets
Q73636278Kinetic analysis of the coordinated interaction of SgrAI restriction endonuclease with different DNA targets
Q55091568LraI from Lactococcus raffinolactis BGTRK10-1, an Isoschizomer of EcoRI, Exhibits Ion Concentration-Dependent Specific Star Activity.
Q38353751PspGI, a type II restriction endonuclease from the extreme thermophile Pyrococcus sp.: structural and functional studies to investigate an evolutionary relationship with several mesophilic restriction enzymes
Q30491964Single-molecule dynamics of the DNA-EcoRII protein complexes revealed with high-speed atomic force microscopy.
Q24558759Solution structure of the B3 DNA binding domain of the Arabidopsis cold-responsive transcription factor RAV1
Q27657299Structural mechanisms for the 5'-CCWGG sequence recognition by the N- and C-terminal domains of EcoRII
Q24535057Structure of the metal-independent restriction enzyme BfiI reveals fusion of a specific DNA-binding domain with a nonspecific nuclease
Q37880722Unraveling DNA dynamics using atomic force microscopy

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