| scholarly article | Q13442814 |
| P2093 | author name string | Y Zhao | |
| Y Chen | |||
| F Luo | |||
| H Ke | |||
| M D Topal | |||
| Q Huai | |||
| J D Colandene | |||
| P2860 | cites work | Metal ion-mediated substrate-assisted catalysis in type II restriction endonucleases | Q24654223 |
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| Crystallographic and functional studies of very short patch repair endonuclease | Q27618500 | ||
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| Refinement of Eco RI endonuclease crystal structure: a revised protein chain tracing | Q27685433 | ||
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| Mg2+ binding to the active site of EcoRV endonuclease: a crystallographic study of complexes with substrate and product DNA at 2 A resolution | Q27730328 | ||
| Structure of PvuII endonuclease with cognate DNA | Q27730900 | ||
| Three-dimensional structure of the 67K N-terminal fragment of E. coli DNA topoisomerase I | Q27731178 | ||
| The crystal structure of EcoRV endonuclease and of its complexes with cognate and non-cognate DNA fragments | Q27732162 | ||
| Structure and mechanism of DNA topoisomerase II | Q27732221 | ||
| Crystal structure of Citrobacter freundii restriction endonuclease Cfr10I at 2.15 A resolution | Q27732535 | ||
| Toroidal structure of lambda-exonuclease | Q27743192 | ||
| Crystal structure of a bacteriophage T7 DNA replication complex at 2.2 A resolution | Q27748814 | ||
| The role of metals in catalysis by the restriction endonuclease BamHI | Q27765729 | ||
| Protein structure comparison by alignment of distance matrices | Q27860798 | ||
| Preparation of selenomethionyl proteins for phase determination | Q27860869 | ||
| Automated MAD and MIR structure solution | Q27861114 | ||
| Crystal structure of a CAP-DNA complex: the DNA is bent by 90 degrees | Q28301788 | ||
| Transcription factors: structural families and principles of DNA recognition | Q29615317 | ||
| REBASE - restriction enzymes and methylases | Q33611853 | ||
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| Structural basis for MutH activation in E.coli mismatch repair and relationship of MutH to restriction endonucleases | Q33888460 | ||
| Organization of restriction-modification systems | Q34111928 | ||
| DNA and spermidine provide a switch mechanism to regulate the activity of restriction enzyme Nae I. | Q34324777 | ||
| Recognition and cleavage of DNA by type-II restriction endonucleases | Q34431350 | ||
| Step-wise DNA relaxation and decatenation by NaeI-43K. | Q34666242 | ||
| Structure of the DNA-Eco RI endonuclease recognition complex at 3 A resolution | Q34684532 | ||
| Changing endonuclease EcoRII Tyr308 to Phe abolishes cleavage but not recognition: possible homology with the Int-family of recombinases | Q34985243 | ||
| The domain organization of NaeI endonuclease: separation of binding and catalysis | Q36003818 | ||
| Structural similarities between topoisomerases that cleave one or both DNA strands | Q36163323 | ||
| Structural, functional, and evolutionary relationships between lambda-exonuclease and the type II restriction endonucleases | Q36163748 | ||
| A structural taxonomy of DNA-binding domains | Q37483850 | ||
| Location of putative binding and catalytic sites of NaeI by random mutagenesis | Q38302709 | ||
| Use of specific oligonucleotide duplexes to stimulate cleavage of refractory DNA sites by restriction endonucleases | Q38321306 | ||
| Crystal structure of restriction endonuclease BglI bound to its interrupted DNA recognition sequence | Q38333398 | ||
| Structure and function of DNA-binding proteins | Q40445583 | ||
| EcoRII can be activated to cleave refractory DNA recognition sites | Q40545771 | ||
| Ability of DNA and spermidine to affect the activity of restriction endonucleases from several bacterial species | Q43886671 | ||
| Nonidentical DNA-binding sites of endonuclease NaeI recognize different families of sequences flanking the recognition site | Q44501284 | ||
| Cloning and expression of the NaeI restriction endonuclease-encoding gene and sequence analysis of the NaeI restriction-modification system | Q72114927 | ||
| Mutants of the gamma delta resolvase: a genetic analysis of the recombination function | Q72388949 | ||
| Five-stranded beta-sheet sandwiched with two alpha-helices: a structural link between restriction endonucleases EcoRI and EcoRV | Q72635015 | ||
| DNA topoisomerase and recombinase activities in Nae I restriction endonuclease | Q72635901 | ||
| DNA cleavage by NaeI: protein purification, rate-limiting step, and accuracy | Q72891359 | ||
| Enzymes that push DNA around | Q73037272 | ||
| P433 | issue | 12 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | crystal structure | Q895901 |
| P304 | page(s) | 3110-8 | |
| P577 | publication date | 2000-06-15 | |
| P1433 | published in | The EMBO Journal | Q1278554 |
| P1476 | title | Crystal structure of NaeI--an evolutionary bridge between DNA endonuclease and topoisomerase | |
| P478 | volume | 19 |
| Q24800162 | A homology model of restriction endonuclease SfiI in complex with DNA |
| Q44273168 | Amino acid substitutions at position 43 of NaeI endonuclease. Evidence for changes in NaeI structure |
| Q31037795 | Asymmetric photocross-linking pattern of restriction endonuclease EcoRII to the DNA recognition sequence |
| Q24555229 | Behavior of restriction-modification systems as selfish mobile elements and their impact on genome evolution |
| Q34688577 | Culprit and victim -- DNA topoisomerase II. |
| Q27664636 | DNA intercalation without flipping in the specific ThaI-DNA complex |
| Q40240500 | Diversity of type II restriction endonucleases that require two DNA recognition sites |
| Q38362416 | EcoRII: a restriction enzyme evolving recombination functions? |
| Q56900882 | Evolutionary relationship between different subgroups of restriction endonucleases |
| Q43582678 | Identification of a PD-(D/E)XK-like domain with a novel configuration of the endonuclease active site in the methyl-directed restriction enzyme Mrr and its homologs |
| Q33910413 | Imaging DNA loops induced by restriction endonuclease EcoRII. A single amino acid substitution uncouples target recognition from cooperative DNA interaction and cleavage |
| Q24802038 | Inference of relationships in the 'twilight zone' of homology using a combination of bioinformatics and site-directed mutagenesis: a case study of restriction endonucleases Bsp6I and PvuII |
| Q34587343 | Origins of the machinery of recombination and sex. |
| Q30331241 | Protein stability indicates divergent evolution of PD-(D/E)XK type II restriction endonucleases. |
| Q38353751 | PspGI, a type II restriction endonuclease from the extreme thermophile Pyrococcus sp.: structural and functional studies to investigate an evolutionary relationship with several mesophilic restriction enzymes |
| Q36280611 | Rational engineering of sequence specificity in R.MwoI restriction endonuclease |
| Q33758119 | Recognition of native DNA methylation by the PvuII restriction endonuclease |
| Q34187086 | Restriction endonucleases: classification, properties, and applications |
| Q73794058 | Sau3AI, a monomeric type II restriction endonuclease that dimerizes on the DNA and thereby induces DNA loops |
| Q34008473 | Self-generated DNA termini relax the specificity of SgrAI restriction endonuclease |
| Q36180207 | Sequence, structure and functional diversity of PD-(D/E)XK phosphodiesterase superfamily |
| Q35805063 | Site-specific recombination and partitioning systems in the stable high copy propagation of the 2-micron yeast plasmid |
| Q33209323 | Specificity changes in the evolution of type II restriction endonucleases: a biochemical and bioinformatic analysis of restriction enzymes that recognize unrelated sequences |
| Q39634823 | Structural and evolutionary classification of Type II restriction enzymes based on theoretical and experimental analyses |
| Q27657299 | Structural mechanisms for the 5'-CCWGG sequence recognition by the N- and C-terminal domains of EcoRII |
| Q24555230 | Structure and function of type II restriction endonucleases |
| Q27684070 | Structure of 5-hydroxymethylcytosine-specific restriction enzyme, AbaSI, in complex with DNA |
| Q24682798 | Topology of Type II REases revisited; structural classes and the common conserved core |
| Q36476697 | Two crystal forms of the restriction enzyme MspI-DNA complex show the same novel structure |
| Q34996805 | Type II restriction endonucleases |
| Q33843093 | Type II restriction endonucleases--a historical perspective and more |
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