Diversity of type II restriction endonucleases that require two DNA recognition sites

scientific article published on November 2003

Diversity of type II restriction endonucleases that require two DNA recognition sites is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1093/NAR/GKG836
P932PMC publication ID275478
P698PubMed publication ID14576294

P50authorDetlev H. KrügerQ1201438
Merlind MuckeQ101542192
P2093author name stringMonika Reuter
P2860cites workCrystal structure of the Bse634I restriction endonuclease: comparison of two enzymes recognizing the same DNA sequenceQ24514776
Nucleoside triphosphate-dependent restriction enzymesQ24555228
Behavior of restriction-modification systems as selfish mobile elements and their impact on genome evolutionQ24555229
Structure and function of type II restriction endonucleasesQ24555230
Biology of DNA restrictionQ24634671
Bacteriophage survival: multiple mechanisms for avoiding the deoxyribonucleic acid restriction systems of their hostsQ24654254
FokI dimerization is required for DNA cleavageQ24657843
Structure of FokI has implications for DNA cleavageQ24657897
A nomenclature for restriction enzymes, DNA methyltransferases, homing endonucleases and their genesQ24684053
Crystallographic and functional studies of very short patch repair endonucleaseQ27618500
Crystal structure of NaeI--an evolutionary bridge between DNA endonuclease and topoisomeraseQ27624935
Unexpected structural diversity in DNA recombination: the restriction endonuclease connectionQ27625490
Structure of the tetrameric restriction endonuclease NgoMIV in complex with cleaved DNAQ27626779
Structure of NaeI-DNA complex reveals dual-mode DNA recognition and complete dimer rearrangementQ27633648
Crystal structure of Citrobacter freundii restriction endonuclease Cfr10I at 2.15 A resolutionQ27732535
Structure of the multimodular endonuclease FokI bound to DNAQ27740190
Subunit assembly and mode of DNA cleavage of the type III restriction endonucleases EcoP1I and EcoP15I.Q31937862
Chimeric restriction enzymes: what is next?Q33737255
Type II restriction endonucleases: structural, functional and evolutionary relationshipsQ33745019
Genetic variation: molecular mechanisms and impact on microbial evolutionQ33820587
Structural basis for MutH activation in E.coli mismatch repair and relationship of MutH to restriction endonucleasesQ33888460
Imaging DNA loops induced by restriction endonuclease EcoRII. A single amino acid substitution uncouples target recognition from cooperative DNA interaction and cleavageQ33910413
Self-generated DNA termini relax the specificity of SgrAI restriction endonucleaseQ34008473
Many type IIs restriction endonucleases interact with two recognition sites before cleaving DNA.Q34103727
DNA and spermidine provide a switch mechanism to regulate the activity of restriction enzyme Nae I.Q34324777
Similarities and differences among 105 members of the Int family of site-specific recombinasesQ34652687
Changing endonuclease EcoRII Tyr308 to Phe abolishes cleavage but not recognition: possible homology with the Int-family of recombinasesQ34985243
The domain organization of NaeI endonuclease: separation of binding and catalysisQ36003818
Functional domains in Fok I restriction endonuclease.Q37000625
Class-IIS restriction enzymes--a reviewQ37765759
Two subunits of EcoRII restriction endonuclease interact with two DNA recognition sitesQ38311075
Modified DNA fragments activate NaeI cleavage of refractory DNA sitesQ38325335
Regions of endonuclease EcoRII involved in DNA target recognition identified by membrane-bound peptide repertoires.Q38328208
NaeI endonuclease binding to pBR322 DNA induces loopingQ38336509
Oligonucleotide duplexes containing CC(A/T)GG stimulate cleavage of refractory DNA by restriction endonuclease EcoRII.Q38345031
EcoRII: a restriction enzyme evolving recombination functions?Q38362416
Activation of restriction endonuclease EcoRII does not depend on the cleavage of stimulator DNA.Q40507377
EcoRII can be activated to cleave refractory DNA recognition sitesQ40545771
Analysis of DNA looping interactions by type II restriction enzymes that require two copies of their recognition sitesQ43699908
DNA cleavage by type III restriction-modification enzyme EcoP15I is independent of spacer distance between two head to head oriented recognition sitesQ43749963
Amino acid substitutions at position 43 of NaeI endonuclease. Evidence for changes in NaeI structureQ44273168
Nonidentical DNA-binding sites of endonuclease NaeI recognize different families of sequences flanking the recognition siteQ44501284
DNA looping by the Sfi I restriction endonucleaseQ47708812
Cooperative binding properties of restriction endonuclease EcoRII with DNA recognition sites.Q52995430
Hyperexpressed EcoRII renatured from inclusion bodies and native enzyme both exhibit essential cooperativity with two DNA sites.Q53013124
Interaction of EcoRII endonuclease with DNA substrates containing single recognition sitesQ54261959
Evolutionary relationship between different subgroups of restriction endonucleasesQ56900882
The Cfr10I restriction enzyme is functional as a tetramerQ60500600
DNA loopingQ68008374
The SfiI restriction endonuclease makes a four-strand DNA break at two copies of its recognition sequenceQ72241576
DNA topoisomerase and recombinase activities in Nae I restriction endonucleaseQ72635901
[Kinetic modeling of the mechanism of allosteric interactions of restriction endonuclease EcoRII with two DNA segments]Q73078700
Sau3AI, a monomeric type II restriction endonuclease that dimerizes on the DNA and thereby induces DNA loopsQ73794058
FokI requires two specific DNA sites for cleavageQ74326486
DNA cleavage reactions by type II restriction enzymes that require two copies of their recognition sitesQ74328897
EcoRII endonuclease has two identical DNA-binding sites and cleaves one of two co-ordinated recognition sites in one catalytic eventQ74440419
DNA restriction dependent on two recognition sites: activities of the SfiI restriction-modification system in Escherichia coliQ74649181
Alternative arrangements of catalytic residues at the active sites of restriction enzymesQ78067597
P433issue21
P304page(s)6079-6084
P577publication date2003-11-01
P1433published inNucleic Acids ResearchQ135122
P1476titleDiversity of type II restriction endonucleases that require two DNA recognition sites
P478volume31

Reverse relations

cites work (P2860)
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Q41911300Differences between Ca2+ and Mg2+ in DNA binding and release by the SfiI restriction endonuclease: implications for DNA looping
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Q41023221One recognition sequence, seven restriction enzymes, five reaction mechanisms.
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Q37856408The reaction mechanism of FokI excludes the possibility of targeting zinc finger nucleases to unique DNA sites.
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Q33843093Type II restriction endonucleases--a historical perspective and more
Q37880722Unraveling DNA dynamics using atomic force microscopy
Q35627759Visual analysis of concerted cleavage by type IIF restriction enzyme SfiI in subsecond time region

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