Restriction endonucleases that bridge and excise two recognition sites from DNA.

scientific article published on 3 January 2007

Restriction endonucleases that bridge and excise two recognition sites from DNA. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1016/J.JMB.2006.12.070
P932PMC publication ID1892151
P698PubMed publication ID17266985
P5875ResearchGate publication ID6537517

P50authorJacqueline J T MarshallQ79698820
Darren M GowersQ61865872
P2093author name stringStephen E Halford
P2860cites workHow restriction enzymes became the workhorses of molecular biologyQ24523716
BaeI, another unusual BcgI-like restriction endonucleaseQ24548142
Nucleoside triphosphate-dependent restriction enzymesQ24555228
A unique restriction endonuclease, BcgI, from Bacillus coagulansQ24595333
Generation of DNA cleavage specificities of type II restriction endonucleases by reassortment of target recognition domainsQ24669929
A nomenclature for restriction enzymes, DNA methyltransferases, homing endonucleases and their genesQ24684053
REBASE--enzymes and genes for DNA restriction and modificationQ24684227
Protein assembly and DNA looping by the FokI restriction endonucleaseQ25257871
Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectorsQ26778475
Structure of NaeI-DNA complex reveals dual-mode DNA recognition and complete dimer rearrangementQ27633648
Reactions of type II restriction endonucleases with 8-base pair recognition sitesQ33883325
Self-generated DNA termini relax the specificity of SgrAI restriction endonucleaseQ34008473
Effect of supercoiling on the juxtaposition and relative orientation of DNA sitesQ34017846
Does BcgI, a unique restriction endonuclease, require two recognition sites for cleavage?Q74653661
The type IIs restriction endonuclease BspMI is a tetramer that acts concertedly at two copies of an asymmetric DNA sequenceQ77309135
Two intertwined methylation activities of the MmeI restriction-modification class-IIS system from Methylophilus methylotrophusQ77702970
[Type IIE and IIF restriction endonucleases interacting with two recognition sites in DNA]Q81034176
Analysis of the structure of dimeric DNA catenanes by electron microscopyQ34047218
Characterization of AloI, a restriction-modification system of a new typeQ34102760
Many type IIs restriction endonucleases interact with two recognition sites before cleaving DNA.Q34103727
Complex restriction enzymes: NTP-driven molecular motorsQ34178514
Characterization of BcgI, a new kind of restriction-modification systemQ34347512
Type II restriction endonucleases: structure and mechanismQ34555997
Tension-dependent DNA cleavage by restriction endonucleases: two-site enzymes are "switched off" at low forceQ34851749
Enzyme-mediated DNA loopingQ35771536
Restriction and modification systemsQ37041891
DNA binding and recognition by the IIs restriction endonuclease MboII.Q38295631
SfiI endonuclease activity is strongly influenced by the non-specific sequence in the middle of its recognition siteQ38302971
Simultaneous binding of three recognition sites is necessary for a concerted plasmid DNA cleavage by EcoRII restriction endonucleaseQ38315101
Specificity from the synapsis of DNA elements by the Sfi I endonucleaseQ38323728
The metal-independent type IIs restriction enzyme BfiI is a dimer that binds two DNA sites but has only one catalytic centreQ38357645
Substrate DNA and cofactor regulate the activities of a multi-functional restriction-modification enzyme, BcgI.Q39721172
BplI, a new BcgI-like restriction endonuclease, which recognizes a symmetric sequenceQ39721642
DNA supercoiling enables the type IIS restriction enzyme BspMI to recognise the relative orientation of two DNA sequencesQ39922663
Diversity of type II restriction endonucleases that require two DNA recognition sitesQ40240500
Purification and properties of the Eco57I restriction endonuclease and methylase--prototypes of a new class (type IV)Q40535626
Structure and function of restriction endonucleasesQ40540883
EcoRII can be activated to cleave refractory DNA recognition sitesQ40545771
One recognition sequence, seven restriction enzymes, five reaction mechanisms.Q41023221
Recombination by resolvase to analyse DNA communications by the SfiI restriction endonucleaseQ41064313
Repercussions of DNA tracking by the type IC restriction endonuclease EcoR124I on linear, circular and catenated substrates.Q41078620
The HaeIV restriction modification system of Haemophilus aegyptius is encoded by a single polypeptide.Q42612998
The EcoRI restriction endonuclease with bacteriophage lambda DNA. Kinetic studiesQ42881808
A view of consecutive binding events from structures of tetrameric endonuclease SfiI bound to DNA.Q43048971
S-Adenosyl Methionine Prevents Promiscuous DNA Cleavage by the EcoP1I type III Restriction EnzymeQ44608364
Analyzing the functional organization of a novel restriction modification system, the BcgI systemQ47923479
Dependence of McrBC cleavage on distance between recognition elementsQ47969878
Long-range communications between DNA sites by the dimeric restriction endonuclease SgrAI.Q48950348
Selection of non-specific DNA cleavage sites by the type IC restriction endonuclease EcoR124I.Q49108821
Subunit assembly for DNA cleavage by restriction endonuclease SgrAI.Q54528761
Cleavage of Individual DNA Strands by the Different Subunits of the Heterodimeric Restriction Endonuclease BbvCIQ63362548
Studies on the cleavage of bacteriophage lambda DNA with EcoRI restriction endonucleaseQ66901509
DNA cleavage at two recognition sites by the SfiI restriction endonuclease: salt dependence of cis and trans interactions between distant DNA sitesQ71751602
The SfiI restriction endonuclease makes a four-strand DNA break at two copies of its recognition sequenceQ72241576
Reactions of BglI and other type II restriction endonucleases with discontinuous recognition sitesQ73509790
Kinetic analysis of the coordinated interaction of SgrAI restriction endonuclease with different DNA targetsQ73636278
Sau3AI, a monomeric type II restriction endonuclease that dimerizes on the DNA and thereby induces DNA loopsQ73794058
DNA cleavage reactions by type II restriction enzymes that require two copies of their recognition sitesQ74328897
Hopping, jumping and looping by restriction enzymesQ74347698
P433issue2
P407language of work or nameEnglishQ1860
P304page(s)419-431
P577publication date2007-01-03
P1433published inJournal of Molecular BiologyQ925779
P1476titleRestriction endonucleases that bridge and excise two recognition sites from DNA
P478volume367

Reverse relations

cites work (P2860)
Q58697427A model for the evolution of prokaryotic DNA restriction-modification systems based upon the structural malleability of Type I restriction-modification enzymes
Q40244890A switch in the mechanism of communication between the two DNA-binding sites in the SfiI restriction endonuclease
Q38601936CgII cleaves DNA using a mechanism distinct from other ATP-dependent restriction endonucleases
Q38535019Concerted action at eight phosphodiester bonds by the BcgI restriction endonuclease.
Q42957737DNA cleavage and methylation specificity of the single polypeptide restriction-modification enzyme LlaGI.
Q35259150DNA cleavage site selection by Type III restriction enzymes provides evidence for head-on protein collisions following 1D bidirectional motion.
Q42183834DNA looping by FokI: the impact of synapse geometry on loop topology at varied site orientations.
Q41967553Dynamics and consequences of DNA looping by the FokI restriction endonuclease
Q34498475Introduction of customized inserts for s-treamlined assembly and optimization of BioBrick synthetic genetic circuits.
Q34598959MmeI: a minimal Type II restriction-modification system that only modifies one DNA strand for host protection
Q34510053Modification-dependent restriction endonuclease, MspJI, flips 5-methylcytosine out of the DNA helix
Q64084068Novel parameter describing restriction endonucleases: Secondary-Cognate-Specificity and chemical stimulation of TsoI leading to substrate specificity change
Q41429735Organization of the BcgI restriction-modification protein for the cleavage of eight phosphodiester bonds in DNA.
Q41429898Organization of the BcgI restriction-modification protein for the transfer of one methyl group to DNA.
Q40346065Preventing broken Borrelia telomeres: ResT couples dual hairpin telomere formation with product release.
Q36154852Serial sequencing of isolength RAD tags for cost-efficient genome-wide profiling of genetic and epigenetic variations
Q42656840Thermostable proteins bioprocesses: The activity of restriction endonuclease-methyltransferase from Thermus thermophilus (RM.TthHB27I) cloned in Escherichia coli is critically affected by the codon composition of the synthetic gene
Q34172705Translocation, switching and gating: potential roles for ATP in long-range communication on DNA by Type III restriction endonucleases
Q39770852TstI, a Type II restriction-modification protein with DNA recognition, cleavage and methylation functions in a single polypeptide
Q38143721Type I restriction enzymes and their relatives.
Q33843093Type II restriction endonucleases--a historical perspective and more

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