Differential isoform expression and alternative splicing in sex determination in mice

scientific article published on 12 March 2019

Differential isoform expression and alternative splicing in sex determination in mice is …
instance of (P31):
scholarly articleQ13442814

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P6179Dimensions Publication ID1112763407
P356DOI10.1186/S12864-019-5572-X
P932PMC publication ID6419433
P698PubMed publication ID30871468

P50authorIsabel Gomez-RedondoQ89671065
Alfonso Gutiérrez-AdánQ41597667
P2093author name stringPatrick Lonergan
Eva Pericuesta
Benjamín Planells
P2860cites workSex determination: why so many ways of doing it?Q21092698
WT1 interacts with the splicing protein RBM4 and regulates its ability to modulate alternative splicing in vivoQ24300741
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resourcesQ27860739
edgeR: a Bioconductor package for differential expression analysis of digital gene expression dataQ27860819
Alternative isoform regulation in human tissue transcriptomesQ27861118
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Expansion of the eukaryotic proteome by alternative splicingQ29615083
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U12 intron positions are more strongly conserved between animals and plants than U2 intron positionsQ33334678
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New candidate genes identified for controlling mouse gonadal sex determination and the early stages of granulosa and Sertoli cell differentiation.Q33601941
Impact of alternative initiation, splicing, and termination on the diversity of the mRNA transcripts encoded by the mouse transcriptomeQ33679400
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Differential intron retention in Jumonji chromatin modifier genes is implicated in reptile temperature-dependent sex determinationQ33797907
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A nuclear export signal within the high mobility group domain regulates the nucleocytoplasmic translocation of SOX9 during sexual determinationQ34037470
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Temporal transcriptional profiling of somatic and germ cells reveals biased lineage priming of sexual fate in the fetal mouse gonad.Q34205942
Gene expression during sex determination reveals a robust female genetic program at the onset of ovarian developmentQ34458126
Senataxin plays an essential role with DNA damage response proteins in meiotic recombination and gene silencingQ34672035
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Son maintains accurate splicing for a subset of human pre-mRNAsQ35672134
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Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variationQ36044823
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Huwe1 interacts with Gadd45b under oxygen-glucose deprivation and reperfusion injury in primary Rat cortical neuronal cellsQ36402090
Breakpoint regions and homologous synteny blocks in chromosomes have different evolutionary historiesQ37176299
Comparison of gene expression in male and female mouse blastocysts revealed imprinting of the X-linked gene, Rhox5/Pem, at preimplantation stages.Q50741696
Genome-wide identification of Sox8-, and Sox9-dependent genes during early post-natal testis development in the mouse.Q51280940
Cbx2, a polycomb group gene, is required for Sry gene expression in mice.Q51373977
A critical time window of Sry action in gonadal sex determination in mice.Q51672280
Impaired Spermatogenesis, Muscle, and Erythrocyte Function in U12 Intron Splicing-Defective Zrsr1 Mutant Mice.Q53824043
Transcriptomic analysis of mRNA expression and alternative splicing during mouse sex determinationQ63681740
Scrotal heat stress effects on sperm viability, sperm DNA integrity, and the offspring sex ratio in miceQ80251897
Subcellular distribution of importins correlates with germ cell maturationQ80678608
Defective calmodulin-mediated nuclear transport of the sex-determining region of the Y chromosome (SRY) in XY sex reversalQ81475083
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SOX9 has distinct regulatory roles in alternative splicing and transcriptionQ89102120
Minor class splicing shapes the zebrafish transcriptome during developmentQ37612647
Insulin-like growth factors and fish reproductionQ37623251
Non-Canonical and Sexually Dimorphic X Dosage Compensation States in the Mouse and Human GermlineQ37634043
Expression of nucleocytoplasmic transport machinery: clues to regulation of spermatogenic developmentQ37855133
Max is a repressor of germ cell-related gene expression in mouse embryonic stem cellsQ38316064
Expression of a candidate sex-determining gene during mouse testis differentiation.Q38338182
An atlas of alternative splicing profiles and functional associations reveals new regulatory programs and genes that simultaneously express multiple major isoformsQ38601698
The determinants of alternative RNA splicing in human cells.Q38679766
SON and Its Alternatively Spliced Isoforms Control MLL Complex-Mediated H3K4me3 and Transcription of Leukemia-Associated Genes.Q38785179
CB1 cannabinoid receptor drives oocyte maturation and embryo development via PI3K/Akt and MAPK pathwaysQ38827763
Expressions of Sox9, Sox5, and Sox13 transcription factors in mice testis during postnatal development.Q38867291
Salmon provides fast and bias-aware quantification of transcript expressionQ38926825
SOX4 regulates gonad morphogenesis and promotes male germ cell differentiation in miceQ39001393
Intron retention as a component of regulated gene expression programs.Q39229528
Alternative splicing as a regulator of development and tissue identity.Q39295240
Histone modifications at the blastocyst Axin1(Fu) locus mark the heritability of in vitro culture-induced epigenetic alterations in mice.Q39854509
Epigenetic regulation of mouse sex determination by the histone demethylase Jmjd1aQ42248653
A SOX9 defect of calmodulin-dependent nuclear import in campomelic dysplasia/autosomal sex reversalQ44480806
Analysis of gene transcription alterations at the blastocyst stage related to the long-term consequences of in vitro culture in miceQ47229162
The Y Chromosome Modulates Splicing and Sex-Biased Intron Retention Rates in DrosophilaQ47269686
Beyond Transcription: Roles of Transcription Factors in Pre-mRNA Splicing.Q47281734
Sox5 is involved in germ-cell regulation and sex determination in medaka following co-option of nested transposable elementsQ47548354
Testis Determination Requires a Specific FGFR2 Isoform to Repress FOXL2.Q47630825
Huwe1 Regulates the Establishment and Maintenance of Spermatogonia by Suppressing DNA Damage Response.Q47760959
Sequence and Structural Diversity of Mouse Y ChromosomesQ47800480
Identification of novel candidate genes for 46,XY disorders of sex development (DSD) using a C57BL/6J-Y POS mouse modelQ47833960
Epigenetic regulation of male fate commitment from an initially bipotential systemQ50149472
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P4510describes a project that usesDESeq2Q113018293
edgeRQ113334690
P433issue1
P407language of work or nameEnglishQ1860
P921main subjectbiotechnologyQ7108
RNA sequencingQ2542347
alternative mRNA splicing, via spliceosomeQ21114084
transcriptomicsQ28946449
P304page(s)202
P577publication date2019-03-12
P1433published inBMC GenomicsQ15765854
P1476titleDifferential isoform expression and alternative splicing in sex determination in mice
P478volume20

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Q92084013Sex-Dimorphic Behavioral Alterations and Altered Neurogenesis in U12 Intron Splicing-Defective Zrsr1 Mutant Micecites workP2860

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