It takes a PHD to interpret histone methylation

scientific article published on 01 July 2006

It takes a PHD to interpret histone methylation is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1038/NSMB0706-572
P698PubMed publication ID16826231

P50authorYi ZhangQ59765646
P2860cites workTwenty-five years of the nucleosome, fundamental particle of the eukaryote chromosomeQ29618064
The Drosophila nucleosome remodeling factor NURF is required for Ecdysteroid signaling and metamorphosisQ34116937
The PHD finger of the chromatin-associated protein ING2 functions as a nuclear phosphoinositide receptorQ34214128
The transcriptional repressor JHDM3A demethylates trimethyl histone H3 lysine 9 and lysine 36.Q34531694
The PHD finger, a nuclear protein-interaction domainQ36317326
Methylation at lysine 4 of histone H3 in ecdysone-dependent development of DrosophilaQ37346772
Histone H3 lysine 9 methylation and HP1gamma are associated with transcription elongation through mammalian chromatinQ40390690
Purification and properties of an ATP-dependent nucleosome remodeling factor.Q52546410
Structure and ligand of a histone acetyltransferase bromodomainQ22009928
Translating the Histone CodeQ22065840
Isolation of human NURF: a regulator of Engrailed gene expressionQ24299509
ING tumor suppressor proteins are critical regulators of chromatin acetylation required for genome expression and perpetuationQ24300142
Tudor, MBT and chromo domains gauge the degree of lysine methylationQ24301294
Structural basis for the specific recognition of methylated histone H3 lysine 4 by the WD-40 protein WDR5Q24314963
ING2 PHD domain links histone H3 lysine 4 methylation to active gene repressionQ24338124
Human but not yeast CHD1 binds directly and selectively to histone H3 methylated at lysine 4 via its tandem chromodomainsQ24541812
Structural basis for specific binding of Polycomb chromodomain to histone H3 methylated at Lys 27Q24672052
Structure and function of a human TAFII250 double bromodomain moduleQ27622657
Structure of HP1 chromodomain bound to a lysine 9-methylated histone H3 tailQ27638012
Structure of the HP1 chromodomain bound to histone H3 methylated at lysine 9Q27638208
Molecular basis for the discrimination of repressive methyl-lysine marks in histone H3 by Polycomb and HP1 chromodomainsQ27641772
The language of covalent histone modificationsQ27860931
Chd1 chromodomain links histone H3 methylation with SAGA- and SLIK-dependent acetylationQ27937996
A PHD finger of NURF couples histone H3 lysine 4 trimethylation with chromatin remodellingQ28242453
Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURFQ28242466
Genomic maps and comparative analysis of histone modifications in human and mouseQ29614418
Recognition of histone H3 lysine-4 methylation by the double tudor domain of JMJD2AQ29614520
Double chromodomains cooperate to recognize the methylated histone H3 tailQ29614522
The diverse functions of histone lysine methylationQ29614523
WDR5 associates with histone H3 methylated at K4 and is essential for H3 K4 methylation and vertebrate developmentQ29614526
Histone H3 lysine 4 methylation patterns in higher eukaryotic genesQ29614678
P433issue7
P304page(s)572-574
P577publication date2006-07-01
P1433published inNature Structural & Molecular BiologyQ1071739
P1476titleIt takes a PHD to interpret histone methylation
P478volume13

Reverse relations

cites work (P2860)
Q42583186(1)H, (13)C, and (15)N resonance assignments for the tandem PHD finger motifs of human CHD4.
Q39637279A Novel Mammalian Complex Containing Sin3B Mitigates Histone Acetylation and RNA Polymerase II Progression within Transcribed Loci
Q36071123A comprehensive epigenome map of Plasmodium falciparum reveals unique mechanisms of transcriptional regulation and identifies H3K36me2 as a global mark of gene suppression
Q47069385Coordinated regulation of active and repressive histone methylations by a dual-specificity histone demethylase ceKDM7A from Caenorhabditis elegans
Q50335557Demethylation of trimethylated histone H3 Lys4 in vivo by JARID1 JmjC proteins.
Q36748104Different genetic functions for the Rpd3(L) and Rpd3(S) complexes suggest competition between NuA4 and Rpd3(S)
Q80195998Distinct roles of HDAC complexes in promoter silencing, antisense suppression and DNA damage protection
Q36730925Gene-environment interactions and epigenetic basis of human diseases
Q34393141H3K9 and H3K14 acetylation co-occur at many gene regulatory elements, while H3K14ac marks a subset of inactive inducible promoters in mouse embryonic stem cells
Q46913032Histone H3 Arg2 methylation provides alternative directions for COMPASS.
Q43159915Histone H3 lysine 36 dimethylation (H3K36me2) is sufficient to recruit the Rpd3s histone deacetylase complex and to repress spurious transcription
Q92547750Histone acetyltransferase GCN5-mediated regulation of long non-coding RNA At4 contributes to phosphate starvation response in Arabidopsis
Q36051466Histone lysine methyltransferases and demethylases in Plasmodium falciparum
Q41889467Infrequently transcribed long genes depend on the Set2/Rpd3S pathway for accurate transcription
Q24337822Modulation of p53 function by SET8-mediated methylation at lysine 382
Q34352597Multivalent recognition of histone tails by the PHD fingers of CHD5
Q27929914Proteome-wide analysis in Saccharomyces cerevisiae identifies several PHD fingers as novel direct and selective binding modules of histone H3 methylated at either lysine 4 or lysine 36.
Q27650581Regulation of Estrogen Receptor α by the SET7 Lysine Methyltransferase
Q27649107The plant homeodomain finger of RAG2 recognizes histone H3 methylated at both lysine-4 and arginine-2
Q27654188The solution structure of the first PHD finger of autoimmune regulator in complex with non-modified histone H3 tail reveals the antagonistic role of H3R2 methylation

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