scholarly article | Q13442814 |
P50 | author | Savitri Sharma | Q88073086 |
P2093 | author name string | Shalem Raj Padakandla | |
Sisinthy Shivaji | |||
Gumpili Sai Prashanthi | |||
Chinthala Reddy SaiAbhilash | |||
Konduri Ranjith | |||
P2860 | cites work | Genome sequence of enterohaemorrhagic Escherichia coli O157:H7 | Q22122385 |
tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence | Q24544402 | ||
Extended-spectrum beta-lactamases in the 21st century: characterization, epidemiology, and detection of this important resistance threat | Q24550671 | ||
Multilocus sequence typing of total-genome-sequenced bacteria | Q24605958 | ||
ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences | Q24634141 | ||
An undecaprenyl phosphate-aminoarabinose flippase required for polymyxin resistance in Escherichia coli | Q24654765 | ||
Complete nucleotide sequence of a 92-kilobase plasmid harboring the CTX-M-15 extended-spectrum beta-lactamase involved in an outbreak in long-term-care facilities in Toronto, Canada | Q37568365 | ||
Phylogenetic distribution of branched RNA-linked multicopy single-stranded DNA among natural isolates of Escherichia coli | Q37608280 | ||
Analysis of antibiotic resistance regions in Gram-negative bacteria | Q37874671 | ||
Antibiotic resistance profile and virulence genes of uropathogenic Escherichia coli isolates in relation to phylogeny | Q38860966 | ||
Clonal dissemination of a CTX-M-15 beta-lactamase-producing Escherichia coli strain in the Paris area, Tunis, and Bangui | Q39162881 | ||
Biofilm formation by Staphylococcus epidermidis depends on functional RsbU, an activator of the sigB operon: differential activation mechanisms due to ethanol and salt stress | Q39503426 | ||
Alternative transcription factor sigma(B) is involved in regulation of biofilm expression in a Staphylococcus aureus mucosal isolate | Q39588054 | ||
Multiple Streptococcus mutans Genes Are Involved in Biofilm Formation | Q39676851 | ||
MdfA, an Escherichia coli multidrug resistance protein with an extraordinarily broad spectrum of drug recognition | Q39845128 | ||
Enhanced persistence in the colonic microbiota of Escherichia coli strains belonging to phylogenetic group B2: role of virulence factors and adherence to colonic cells | Q40315272 | ||
Whole-Genome Analysis of Antimicrobial-Resistant and Extraintestinal Pathogenic Escherichia coli in River Water. | Q40406138 | ||
WGS accurately predicts antimicrobial resistance in Escherichia coli | Q40769211 | ||
The Quorum Sensing Inhibitor Hamamelitannin Increases Antibiotic Susceptibility of Staphylococcus aureus Biofilms by Affecting Peptidoglycan Biosynthesis and eDNA Release | Q40811390 | ||
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes | Q40936712 | ||
Mutants of Escherichia coli defective in the degradation of guanosine 5′-triphosphate, 3′-diphosphate (pppGpp) | Q41023922 | ||
Characterization of Escherichia coli Phylogenetic Groups Associated with Extraintestinal Infections in South Indian Population | Q41079361 | ||
Distribution of sulfonamide resistance genes in Escherichia coli and Salmonella isolates from swine and chickens at abattoirs in Ontario and Québec, Canada | Q41966788 | ||
Identification of acquired antimicrobial resistance genes | Q41981445 | ||
Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12. | Q42645426 | ||
Molecular characterization of bla ESBL-harboring conjugative plasmids identified in multi-drug resistant Escherichia coli isolated from food-producing animals and healthy humans | Q43097212 | ||
Prediction of antibiotic resistance from antibiotic resistance genes detected in antibiotic-resistant commensal Escherichia coli using PCR or WGS. | Q43167692 | ||
Bilateral endogenous Escherichia coli endophthalmitis | Q43661780 | ||
Plasmid-mediated extended-spectrum beta-lactamase (CTX-M-3 like) from India and gene association with insertion sequence ISEcp1. | Q43685982 | ||
Broiler chickens, broiler chicken meat, pigs and pork as sources of ExPEC related virulence genes and resistance in Escherichia coli isolates from community-dwelling humans and UTI patients | Q43758643 | ||
Second messenger-mediated adjustment of bacterial swimming velocity | Q44130151 | ||
Dissection of the mechanism for the stringent factor RelA. | Q44206960 | ||
Biochemical analysis of the ceftazidime-hydrolysing extended-spectrum beta-lactamase CTX-M-15 and of its structurally related beta-lactamase CTX-M-3. | Q44235785 | ||
Antibiotic resistance integrons and extended-spectrum {beta}-lactamases among Enterobacteriaceae isolates recovered from chickens and swine in Portugal | Q46611883 | ||
Bacterial profile of ocular infections: a systematic review | Q46747284 | ||
kSNP3.0: SNP detection and phylogenetic analysis of genomes without genome alignment or reference genome | Q47936283 | ||
The large plasmids of Shiga-toxin-producing Escherichia coli (STEC) are highly variable genetic elements | Q47954618 | ||
Progress in and promise of bacterial quorum sensing research. | Q49965873 | ||
The complete genome sequence of Escherichia coli K-12 | Q27860542 | ||
Are Escherichia coli Pathotypes Still Relevant in the Era of Whole-Genome Sequencing? | Q28077683 | ||
Cellulose as an architectural element in spatially structured Escherichia coli biofilms | Q30564111 | ||
VFDB 2016: hierarchical and refined dataset for big data analysis--10 years on | Q31025236 | ||
plasmidSPAdes: assembling plasmids from whole genome sequencing data | Q31118045 | ||
Genetic diversity and population structure of Escherichia coli isolated from freshwater beaches | Q33293602 | ||
In silico detection and typing of plasmids using PlasmidFinder and plasmid multilocus sequence typing | Q33798308 | ||
Quinolone-resistant uropathogenic Escherichia coli strains from phylogenetic group B2 have fewer virulence factors than their susceptible counterparts. | Q33856263 | ||
Global expression of prophage genes in Escherichia coli O157:H7 strain EDL933 in response to norfloxacin. | Q33856818 | ||
Diversity of bacteria at healthy human conjunctiva | Q33899793 | ||
The link between phylogeny and virulence in Escherichia coli extraintestinal infection | Q34000162 | ||
Prevalence and characterization of plasmids carrying sulfonamide resistance genes among Escherichia coli from pigs, pig carcasses and human | Q34068664 | ||
Using the Velvet de novo assembler for short-read sequencing technologies | Q34137596 | ||
Recent advances in understanding enteric pathogenic Escherichia coli. | Q34375210 | ||
Estimating variation within the genes and inferring the phylogeny of 186 sequenced diverse Escherichia coli genomes | Q34462788 | ||
Ocular pathogen or commensal: a PCR-based study of surface bacterial flora in normal and dry eyes. | Q34585691 | ||
Characterization of the normal microbiota of the ocular surface. | Q34782174 | ||
A novel dispersin protein in enteroaggregative Escherichia coli | Q34815535 | ||
PHAST: a fast phage search tool | Q35075734 | ||
BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons | Q35185871 | ||
Molecular analysis of antimicrobial-susceptible and -resistant Escherichia coli from retail meats and human stool and clinical specimens in a rural community setting | Q35267870 | ||
What drives bacteria to produce a biofilm? | Q35835012 | ||
Emergence of Enterobacteriaceae producing extended-spectrum beta-lactamases (ESBLs) in the community | Q36139832 | ||
Global gene expression in Escherichia coli, isolated from the diseased ocular surface of the human eye with a potential to form biofilm | Q36341499 | ||
Resistance in gram-negative bacteria: enterobacteriaceae | Q36492668 | ||
Extraintestinal pathogenic Escherichia coli | Q36864664 | ||
Uropathogenic Escherichia coli-Associated Exotoxins | Q37035981 | ||
First report on class 1 integrons and Trimethoprim-resistance genes from dfrA group in uropathogenic E. coli (UPEC) from the Aleppo area in Syria | Q37092991 | ||
PHASTER: a better, faster version of the PHAST phage search tool | Q37182130 | ||
tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes | Q37182153 | ||
Resistance plasmid families in Enterobacteriaceae | Q37204254 | ||
Pathogenomics of the virulence plasmids of Escherichia coli. | Q37451506 | ||
Dissemination of blaNDM-5 gene via an IncX3-type plasmid among non-clonal Escherichia coli in China. | Q53689670 | ||
Whole genome sequencing of diverse Shiga toxin-producing and non-producing Escherichia coli strains reveals a variety of virulence and novel antibiotic resistance plasmids. | Q53802235 | ||
Extended virulence genotypes of Escherichia coli strains from patients with urosepsis in relation to phylogeny and host compromise. | Q54067789 | ||
Lipopolysaccharides of polymyxin B-resistant mutants of Escherichia coli are extensively substituted by 2-aminoethyl pyrophosphate and contain aminoarabinose in lipid A. | Q54177184 | ||
Prevalence of trimethoprim resistance genes in Escherichia coli isolates of human and animal origin in Lithuania. | Q54393861 | ||
Escherichia coli pathotypes associated with diarrhea in Romanian children younger than 5 years of age. | Q54401311 | ||
Replicon typing of plasmids in Escherichia coli producing extended-spectrum beta-lactamases. | Q54415321 | ||
Biofilm formation in uropathogenic Escherichia coli strains: relationship with prostatitis, urovirulence factors and antimicrobial resistance. | Q54450519 | ||
Regulatory and functional co-operation of flagella and type 1 pili in adhesive and invasive abilities of AIEC strain LF82 isolated from a patient with Crohn's disease. | Q54526968 | ||
Natural quorum sensing inhibitors effectively downregulate gene expression of Pseudomonas aeruginosa virulence factors | Q64111284 | ||
Commensal Escherichia coli isolates are phylogenetically distributed among geographically distinct human populations | Q73967086 | ||
Crl stimulates RpoS activity during stationary phase | Q77394597 | ||
ClermonTyping: an easy-to-use and accurate in silico method for Escherichia genus strain phylotyping | Q89148297 | ||
Biofilm and motility in response to environmental and host-related signals in Gram negative opportunistic pathogens | Q91179321 | ||
Gene Targets in Ocular Pathogenic Escherichia coli for Mitigation of Biofilm Formation to Overcome Antibiotic Resistance | Q91782224 | ||
Longitudinal Survey of Fungi in the Human Gut: ITS Profiling, Phenotyping, and Colonization | Q92239043 | ||
Characterization and rapid identification of phylogroup G in Escherichia coli, a lineage with high virulence and antibiotic resistance potential | Q92681611 | ||
Plasmid-encoded tet(X) genes that confer high-level tigecycline resistance in Escherichia coli | Q93001438 | ||
P275 | copyright license | Creative Commons Attribution 4.0 International | Q20007257 |
P6216 | copyright status | copyrighted | Q50423863 |
P433 | issue | 3 | |
P921 | main subject | Escherichia coli | Q25419 |
whole genome sequencing | Q2068526 | ||
P577 | publication date | 2020-03-17 | |
P1433 | published in | Microorganisms | Q27725360 |
P1476 | title | Phylogenetic Grouping of Human Ocular Escherichia coli Based on Whole-Genome Sequence Analysis | |
P478 | volume | 8 |
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