Profiling Optimal Conditions for Capturing EDEM Proteins Complexes in Melanoma Using Mass Spectrometry

scientific article published on 01 January 2019

Profiling Optimal Conditions for Capturing EDEM Proteins Complexes in Melanoma Using Mass Spectrometry is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

External links are
P356DOI10.1007/978-3-030-15950-4_9
P698PubMed publication ID31347047

P50authorCristian V A MunteanuQ85492658
P2093author name stringAndrei-Jose Petrescu
Gabriela N Chiriţoiu
Ștefana M Petrescu
P2860cites workIdentification, expression, and characterization of a cDNA encoding human endoplasmic reticulum mannosidase I, the enzyme that catalyzes the first mannose trimming step in mammalian Asn-linked oligosaccharide biosynthesisQ22010397
Cloning and expression of a specific human alpha 1,2-mannosidase that trims Man9GlcNAc2 to Man8GlcNAc2 isomer B during N-glycan biosynthesisQ22010659
Defining human ERAD networks through an integrative mapping strategyQ24298439
Human HRD1 is an E3 ubiquitin ligase involved in degradation of proteins from the endoplasmic reticulumQ24298901
EDEM2 initiates mammalian glycoprotein ERAD by catalyzing the first mannose trimming stepQ24301651
OS-9 and GRP94 deliver mutant alpha1-antitrypsin to the Hrd1-SEL1L ubiquitin ligase complex for ERADQ24312778
Human EDEM2, a novel homolog of family 47 glycosidases, is involved in ER-associated degradation of glycoproteinsQ24313639
An interaction map of endoplasmic reticulum chaperones and foldasesQ24337336
A novel ER alpha-mannosidase-like protein accelerates ER-associated degradationQ24522524
One step at a time: endoplasmic reticulum-associated degradationQ24658302
EDEM1 reveals a quality control vesicular transport pathway out of the endoplasmic reticulum not involving the COPII exit sitesQ24683239
The delicate balance between secreted protein folding and endoplasmic reticulum-associated degradation in human physiologyQ27015793
Tyrosinase degradation is prevented when EDEM1 lacks the intrinsically disordered regionQ27324164
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resourcesQ27860739
An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein databaseQ27861106
N-Glycan-based ER Molecular Chaperone and Protein Quality Control System: The Calnexin Binding CycleQ28085581
In and Out of the ER: Protein Folding, Quality Control, Degradation, and Related Human DiseasesQ28109625
Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene listsQ28131785
EDEM as an acceptor of terminally misfolded glycoproteins released from calnexinQ28212764
A novel stress-induced EDEM variant regulating endoplasmic reticulum-associated glycoprotein degradationQ28296585
EDEM1 accelerates the trimming of alpha1,2-linked mannose on the C branch of N-glycansQ28510507
EDEM3, a soluble EDEM homolog, enhances glycoprotein endoplasmic reticulum-associated degradation and mannose trimmingQ28593084
Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometryQ29547311
In-gel digestion for mass spectrometric characterization of proteins and proteomesQ29547583
Proteomics. Tissue-based map of the human proteomeQ29617248
Identifying binary protein-protein interactions from affinity purification mass spectrometry dataQ30666997
Predicting direct protein interactions from affinity purification mass spectrometry dataQ33733622
Comparison of extensive protein fractionation and repetitive LC-MS/MS analyses on depth of analysis for complex proteomesQ33853028
Improved elution conditions for native co-immunoprecipitationQ33857490
Quantitative proteomics combined with BAC TransgeneOmics reveals in vivo protein interactionsQ33861783
Reversed-phase chromatography with multiple fraction concatenation strategy for proteome profiling of human MCF10A cellsQ35059737
Affinity purification-mass spectrometry and network analysis to understand protein-protein interactionsQ35096324
Characterization of early EDEM1 protein maturation events and their functional implicationsQ35107478
Role of the endoplasmic reticulum-associated degradation (ERAD) pathway in degradation of hepatitis C virus envelope proteins and production of virus particlesQ35423569
Extending the dynamic range of label-free mass spectrometric quantification of affinity purificationsQ35751621
Visiting the ER: the endoplasmic reticulum as a target for therapeutics in traffic related diseasesQ36903301
Assigning significance to peptides identified by tandem mass spectrometry using decoy databasesQ37027478
Affinity-purification coupled to mass spectrometry: basic principles and strategiesQ38011666
A mass spectrometry view of stable and transient protein interactionsQ38222149
Bypass of glycan-dependent glycoprotein delivery to ERAD by up-regulated EDEM1.Q38331877
Inhibition of N-glycan processing modulates the network of EDEM3 interactorsQ38709373
GeLC-MS/MS analysis of complex protein mixturesQ40158555
EDEM1 regulates ER-associated degradation by accelerating de-mannosylation of folding-defective polypeptides and by inhibiting their covalent aggregation.Q40229528
Epitope located N-glycans impair the MHC-I epitope generation and presentationQ41023840
A two-step framework for inferring direct protein-protein interaction network from AP-MS dataQ41670562
Genetic dissection of mammalian ERAD through comparative haploid and CRISPR forward genetic screensQ42576677
A shared endoplasmic reticulum-associated degradation pathway involving the EDEM1 protein for glycosylated and nonglycosylated proteinsQ42827982
A dual pressure linear ion trap Orbitrap instrument with very high sequencing speed.Q42924044
Comparison of linear intrascan and interscan dynamic ranges of Orbitrap and ion-mobility time-of-flight mass spectrometersQ47711927
Orthogonality of separation in two-dimensional liquid chromatography.Q51963424
EDEM1's mannosidase-like domain binds ERAD client proteins in a redox-sensitive manner and possesses catalytic activityQ57705922
P4510describes a project that usesmass spectrometryQ180809
P304page(s)155-167
P577publication date2019-01-01
P1433published inAdvances in Experimental Medicine and BiologyQ4686385
P1476titleProfiling Optimal Conditions for Capturing EDEM Proteins Complexes in Melanoma Using Mass Spectrometry
P478volume1140

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