The 65 and 110 kDa SR-related proteins of the U4/U6.U5 tri-snRNP are essential for the assembly of mature spliceosomes

scientific article

The 65 and 110 kDa SR-related proteins of the U4/U6.U5 tri-snRNP are essential for the assembly of mature spliceosomes is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1093/EMBOJ/20.10.2553
P3181OpenCitations bibliographic resource ID253795
P932PMC publication ID125249
P698PubMed publication ID11350945
P5875ResearchGate publication ID11986608

P2093author name stringR Lührmann
O V Makarova
E M Makarov
P2860cites workMolecular characterization of an autoallergen, Hom s 1, identified by serum IgE from atopic dermatitis patientsQ22008550
A novel genetic screen for snRNP assembly factors in yeast identifies a conserved protein, Sad1p, also required for pre-mRNA splicingQ22008761
Sm and Sm-like proteins assemble in two related complexes of deep evolutionary originQ22009995
A doughnut-shaped heteromer of human Sm-like proteins binds to the 3'-end of U6 snRNA, thereby facilitating U4/U6 duplex formation in vitroQ22010663
The 20kD protein of human [U4/U6.U5] tri-snRNPs is a novel cyclophilin that forms a complex with the U4/U6-specific 60kD and 90kD proteinsQ24312016
The human U5 snRNP-specific 100-kD protein is an RS domain-containing, putative RNA helicase with significant homology to the yeast splicing factor Prp28pQ24316012
snRNP Sm proteins share two evolutionarily conserved sequence motifs which are involved in Sm protein-protein interactionsQ24317255
Functional expression of cloned human splicing factor SF2: homology to rna-binding proteins, U1 70K, and drosophila splicing regulatorsQ24317722
An evolutionarily conserved U5 snRNP-specific protein is a GTP-binding factor closely related to the ribosomal translocase EF-2.Q24318957
The HeLa 200 kDa U5 snRNP-specific protein and its homologue in Saccharomyces cerevisiae are members of the DEXH-box protein family of putative RNA helicasesQ24324586
Functional interaction of a novel 15.5kD [U4/U6.U5] tri-snRNP protein with the 5' stem-loop of U4 snRNAQ24529915
Mammalian splicing factor SF3a120 represents a new member of the SURP family of proteins and is homologous to the essential splicing factor PRP21p of Saccharomyces cerevisiae.Q24539048
The human U4/U6 snRNP contains 60 and 90kD proteins that are structurally homologous to the yeast splicing factors Prp4p and Prp3pQ24539217
A new cyclophilin and the human homologues of yeast Prp3 and Prp4 form a complex associated with U4/U6 snRNPsQ24539227
Identification of an RNA-dependent ATPase activity in mammalian U5 snRNPsQ24546120
20S small nuclear ribonucleoprotein U5 shows a surprisingly complex protein compositionQ24609558
A gene encoding antigenic peptides of human squamous cell carcinoma recognized by cytotoxic T lymphocytesQ24647420
Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nucleiQ27860728
Identification by mass spectrometry and functional analysis of novel proteins of the yeast [U4/U6.U5] tri-snRNP.Q27937630
Mechanical devices of the spliceosome: motors, clocks, springs, and thingsQ27938081
Purification of the yeast U4/U6.U5 small nuclear ribonucleoprotein particle and identification of its proteinsQ27939063
Protein-protein interactions and 5'-splice-site recognition in mammalian mRNA precursorsQ28251112
The superfamily of arginine/serine-rich splicing factorsQ29618794
SR proteins and splicing controlQ29619936
Protein functions in pre-mRNA splicingQ29620262
The structure and function of proteins involved in mammalian pre-mRNA splicingQ29620286
SR-related proteins and the processing of messenger RNA precursorsQ33765345
3'-terminal labelling of RNA with T4 RNA ligaseQ34273342
The PROSITE database, its status in 1995.Q34585880
Functional interactions of Prp8 with both splice sites at the spliceosomal catalytic centerQ35203137
SR proteins are sufficient for exon bridging across an intronQ35905160
Evidence that the 60-kDa protein of 17S U2 small nuclear ribonucleoprotein is immunologically and functionally related to the yeast PRP9 splicing factor and is required for the efficient formation of prespliceosomesQ36518245
Gel electrophoretic isolation of splicing complexes containing U1 small nuclear ribonucleoprotein particlesQ36783515
Extensive interactions of PRP8 protein with the 5' and 3' splice sites during splicing suggest a role in stabilization of exon alignment by U5 snRNA.Q38294598
Primary structure of the human splicing factor asf reveals similarities with drosophila regulatorsQ38334210
The [U4/U6.U5] tri-snRNP-specific 27K protein is a novel SR protein that can be phosphorylated by the snRNP-associated protein kinaseQ42060574
SR proteins escort the U4/U6.U5 tri-snRNP to the spliceosomeQ43205783
In vitro reconstitution of snRNPs: a reconstituted U4/U6 snRNP participates in splicing complex formation.Q50336095
Cyclic 2',3'-phosphates and nontemplated nucleotides at the 3' end of spliceosomal U6 small nuclear RNA'sQ52443500
Modification of acidic residues normalizes sodium dodecyl sulfate-polyacrylamide gel electrophoresis of caldesmon and other proteins that migrate anomalouslyQ68220943
P433issue10
P407language of work or nameEnglishQ1860
P921main subjectmolecular massQ182854
Ubiquitin specific peptidase 39Q21125234
spliceosomeQ915868
P304page(s)2553-2563
P577publication date2001-05-01
P1433published inThe EMBO JournalQ1278554
P1476titleThe 65 and 110 kDa SR-related proteins of the U4/U6.U5 tri-snRNP are essential for the assembly of mature spliceosomes
P478volume20

Reverse relations

cites work (P2860)
Q34010288A functional genomic screen reveals novel host genes that mediate interferon-alpha's effects against hepatitis C virus
Q24302596A human splicing factor, SKIP, associates with P-TEFb and enhances transcription elongation by HIV-1 Tat.
Q36823274A new HIF-1α/RANTES-driven pathway to hepatocellular carcinoma mediated by germline haploinsufficiency of SART1/HAF in mice
Q24299148A novel SR-related protein is required for the second step of Pre-mRNA splicing
Q28264738A proteomic study of SUMO-2 target proteins
Q37332858A role for ubiquitin in the spliceosome assembly pathway
Q39600802A single cell cycle genes homology region (CHR) controls cell cycle-dependent transcription of the cdc25C phosphatase gene and is able to cooperate with E2F or Sp1/3 sites
Q39633161A spliceosome intermediate with loosely associated tri-snRNP accumulates in the absence of Prp28 ATPase activity
Q24294927A subset of human 35S U5 proteins, including Prp19, function prior to catalytic step 1 of splicing
Q39452744A systems biology approach identifies SART1 as a novel determinant of both 5-fluorouracil and SN38 drug resistance in colorectal cancer.
Q92536533An Allosteric Network for Spliceosome Activation Revealed by High-Throughput Suppressor Analysis in Saccharomyces cerevisiae
Q24540060Biochemical and genetic analyses of the U5, U6, and U4/U6 x U5 small nuclear ribonucleoproteins from Saccharomyces cerevisiae
Q35813276Broad specificity of SR (serine/arginine) proteins in the regulation of alternative splicing of pre-messenger RNA.
Q24338153CIR, a corepressor of CBF1, binds to PAP-1 and effects alternative splicing
Q34700967Cell cycle abnormalities associated with differential perturbations of the human U5 snRNP associated U5-200kD RNA helicase
Q34146146Characterization of purified human Bact spliceosomal complexes reveals compositional and morphological changes during spliceosome activation and first step catalysis
Q24515041Comparative genomics and evolution of proteins involved in RNA metabolism
Q24300333Crooked neck is a component of the human spliceosome and implicated in the splicing process
Q27641709Crystal structure of a complex between human spliceosomal cyclophilin H and a U4/U6 snRNP-60K peptide
Q28547435Cwf16p Associating with the Nineteen Complex Ensures Ordered Exon Joining in Constitutive Pre-mRNA Splicing in Fission Yeast
Q38103253Decoding ubiquitin for mitosis
Q24304372Distinct and overlapping sets of SUMO-1 and SUMO-2 target proteins revealed by quantitative proteomics
Q52647713Downregulation of ubiquitin-specific peptidase 39 suppresses the proliferation and induces the apoptosis of human colorectal cancer cells.
Q36315971Dynamic interactions of Ntr1-Ntr2 with Prp43 and with U5 govern the recruitment of Prp43 to mediate spliceosome disassembly
Q24306136Dynamic protein-protein interaction wiring of the human spliceosome
Q37547706Expression of Interferon Effector Gene SART1 Correlates with Interferon Treatment Response against Hepatitis B Infection.
Q43088927Functional genomics identifies a requirement of pre-mRNA splicing factors for sister chromatid cohesion
Q34547657Functional links between the Prp19-associated complex, U4/U6 biogenesis, and spliceosome recycling.
Q27865260Functional mammalian spliceosomal complex E contains SMN complex proteins in addition to U1 and U2 snRNPs.
Q38993788Functions and regulation of the Brr2 RNA helicase during splicing
Q27935130Genetic analysis reveals a role for the C terminus of the Saccharomyces cerevisiae GTPase Snu114 during spliceosome activation
Q37450692HAF : the new player in oxygen-independent HIF-1alpha degradation
Q33673175High expression of ubiquitin-specific peptidase 39 is associated with the development of vascular remodeling
Q43649668Human PRP4 kinase is required for stable tri-snRNP association during spliceosomal B complex formation
Q39674598Human U4/U6.U5 and U4atac/U6atac.U5 tri-snRNPs exhibit similar protein compositions
Q36994805Hypoxia-associated factor, a novel E3-ubiquitin ligase, binds and ubiquitinates hypoxia-inducible factor 1alpha, leading to its oxygen-independent degradation
Q36489201Hypoxia-regulated components of the U4/U6.U5 tri-small nuclear riboprotein complex: possible role in autosomal dominant retinitis pigmentosa
Q39744901ICP27 interacts with SRPK1 to mediate HSV splicing inhibition by altering SR protein phosphorylation
Q47846564Identification of a 35S U4/U6.U5 tri-small nuclear ribonucleoprotein (tri-snRNP) complex intermediate in spliceosome assembly
Q30360791Identification of a small molecule inhibitor that stalls splicing at an early step of spliceosome activation.
Q38755963Knockdown of USP39 induces cell cycle arrest and apoptosis in melanoma
Q33556192Knockdown of ubiquitin-specific peptidase 39 inhibited the growth of osteosarcoma cells and induced apoptosis in vitro
Q38885249Lentivirus mediated silencing of ubiquitin specific peptidase 39 inhibits cell proliferation of human hepatocellular carcinoma cells in vitro
Q73813225Mapping QTLs and candidate genes for rice root traits under different water-supply conditions and comparative analysis across three populations
Q37620684Multiple components of the spliceosome regulate Mcl1 activity in neuroblastoma
Q39675127Multiple roles for SR proteins in trans splicing
Q59006843New components of the spliced leader RNP required for nematode trans-splicing
Q28534783New insights into the RNA-based mechanism of action of the anticancer drug 5'-fluorouracil in eukaryotic cells
Q38197052Novel regulatory principles of the spliceosomal Brr2 RNA helicase and links to retinal disease in humans
Q37225467Overexpression of USP39 predicts poor prognosis and promotes tumorigenesis of prostate cancer via promoting EGFR mRNA maturation and transcription elongation
Q51072666PKR activation and eIF2α phosphorylation mediate human globin mRNA splicing at spliceosome assembly.
Q46634476Phosphorylation of human PRP28 by SRPK2 is required for integration of the U4/U6-U5 tri-snRNP into the spliceosome
Q24292373Protein 61K, encoded by a gene (PRPF31) linked to autosomal dominant retinitis pigmentosa, is required for U4/U6*U5 tri-snRNP formation and pre-mRNA splicing
Q24296676Purification and characterization of native spliceosomes suitable for three-dimensional structural analysis
Q38699941Putative role of SUMOylation in controlling the activity of deubiquitinating enzymes in cancer
Q37692001RBM25 Mediates Abiotic Responses in Plants
Q92093056RNA splicing factor USP39 promotes glioma progression by inducing TAZ mRNA maturation
Q24299534RNAi knockdown of hPrp31 leads to an accumulation of U4/U6 di-snRNPs in Cajal bodies
Q38841177Reduced USP39 expression inhibits malignant proliferation of medullary thyroid carcinoma in vitro
Q27668022Role of the ubiquitin-like protein Hub1 in splice-site usage and alternative splicing
Q38757480Roles of Sumoylation in mRNA Processing and Metabolism
Q90102232SNRP-27, the C. elegans homolog of the tri-snRNP 27K protein, has a role in 5' splice site positioning in the spliceosome
Q37546093Sad1 counteracts Brr2-mediated dissociation of U4/U6.U5 in tri-snRNP homeostasis
Q92602462Smu1 and RED are required for activation of spliceosomal B complexes assembled on short introns
Q38296438Stable tri-snRNP integration is accompanied by a major structural rearrangement of the spliceosome that is dependent on Prp8 interaction with the 5' splice site
Q60917803Structural and Functional Insights into Human Nuclear Cyclophilins
Q55001411Structural dynamics of the N-terminal domain and the Switch loop of Prp8 during spliceosome assembly and activation.
Q98564287Systematic characterization of the branch point binding protein, splicing factor 1, gene family in plant development and stress responses
Q55137359Targeting the spliceosome for cutaneous squamous cell carcinoma therapy: a role for c-MYC and wild-type p53 in determining the degree of tumour selectivity.
Q27940003The Clf1p splicing factor promotes spliceosome assembly through N-terminal tetratricopeptide repeat contacts
Q26970797The Dengue Virus NS5 Protein Intrudes in the Cellular Spliceosome and Modulates Splicing
Q21183897The SR protein family
Q38637779The biochemistry of blister fluid from pediatric burn injuries: proteomics and metabolomics aspects.
Q26766125The business of deubiquitination - location, location, location
Q27683986The conserved ubiquitin-like protein Hub1 plays a critical role in splicing in human cells
Q27682659The crystal structure of S. cerevisiae Sad1, a catalytically inactive deubiquitinase that is broadly required for pre-mRNA splicing
Q37843675The function of spliceosome components in open mitosis
Q39554922The hypoxia-associated factor switches cells from HIF-1α- to HIF-2α-dependent signaling promoting stem cell characteristics, aggressive tumor growth and invasion
Q37955947The many roles of the highly interactive HSV protein ICP27, a key regulator of infection
Q24548787The network of protein-protein interactions within the human U4/U6.U5 tri-snRNP
Q36268425USP39 Deubiquitinase Is Essential for KRAS Oncogene-driven Cancer.
Q37735108USP39 regulates the growth of SMMC-7721 cells via FoxM1.
Q34486872Ubiquitin binding by a variant Jab1/MPN domain in the essential pre-mRNA splicing factor Prp8p
Q24336844Ubiquitin-like protein Hub1 is required for pre-mRNA splicing and localization of an essential splicing factor in fission yeast
Q38746245Ubiquitin-specific protease 39 is overexpressed in human lung cancer and promotes tumor cell proliferation in vitro
Q33797859Zebrafish usp39 mutation leads to rb1 mRNA splicing defect and pituitary lineage expansion
Q21134952hnRNP A1 and hnRNP F modulate the alternative splicing of exon 11 of the insulin receptor gene
Q44950735p53 is activated in response to disruption of the pre-mRNA splicing machinery.

Search more.