review article | Q7318358 |
scholarly article | Q13442814 |
P8978 | DBLP publication ID | journals/bmcbi/SchwarzMKESSD05 |
P6179 | Dimensions Publication ID | 1021418672 |
P356 | DOI | 10.1186/1471-2105-6-135 |
P3181 | OpenCitations bibliographic resource ID | 693718 |
P932 | PMC publication ID | 1175843 |
P698 | PubMed publication ID | 15929789 |
P5875 | ResearchGate publication ID | 7811916 |
P50 | author | Stefan Schuster | Q2337635 |
Thomas Dandekar | Q21127379 | ||
Roland Schwarz | Q57200465 | ||
P2093 | author name string | Axel von Kamp | |
Bernd Engels | |||
Heiner Schirmer | |||
Patrick Musch | |||
P2860 | cites work | Antioxidant defense in Plasmodium falciparum--data mining of the transcriptome | Q24800957 |
Computation of elementary modes: a unifying framework and the new binary approach | Q24803776 | ||
Global analysis of protein expression in yeast | Q27860658 | ||
A general definition of metabolic pathways useful for systematic organization and analysis of complex metabolic networks | Q28145745 | ||
The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models | Q28212902 | ||
Metabolic network structure determines key aspects of functionality and regulation | Q28214885 | ||
Comparison of network-based pathway analysis methods | Q28274818 | ||
Metabolites: a helping hand for pathway evolution? | Q33966772 | ||
Systems biology markup language: Level 2 and beyond | Q33974200 | ||
Comparative genome analysis and pathway reconstruction | Q34612133 | ||
Elementary modes analysis of photosynthate metabolism in the chloroplast stroma. | Q35050981 | ||
Redox proteomics: identification of oxidatively modified proteins. | Q35181893 | ||
Pharmacogenomic strategies against resistance development in microbial infections | Q35785222 | ||
Glutathione reductase and glutamate dehydrogenase of Plasmodium falciparum, the causative agent of tropical malaria | Q39148025 | ||
Theory for the systemic definition of metabolic pathways and their use in interpreting metabolic function from a pathway-oriented perspective | Q41724911 | ||
Hierarchical analysis of dependency in metabolic networks | Q42599806 | ||
In situ kinetic analysis of glyoxalase I and glyoxalase II in Saccharomyces cerevisiae. | Q43674559 | ||
Exploring the pathway structure of metabolism: decomposition into subnetworks and application to Mycoplasma pneumoniae | Q43887992 | ||
A method for classifying metabolites in topological pathway analyses based on minimization of pathway number | Q44563793 | ||
Fundamental Escherichia coli biochemical pathways for biomass and energy production: identification of reactions | Q44713120 | ||
Fundamental Escherichia coli biochemical pathways for biomass and energy production: creation of overall flux states | Q44820940 | ||
A method for the determination of flux in elementary modes, and its application to Lactobacillus rhamnosus | Q45095304 | ||
FluxAnalyzer: exploring structure, pathways, and flux distributions in metabolic networks on interactive flux maps | Q48608103 | ||
Minimal cut sets in biochemical reaction networks. | Q51637467 | ||
Hierarchical genetic algorithm for near optimal feedforward neural network design. | Q52046254 | ||
METATOOL: for studying metabolic networks. | Q52216547 | ||
The small world inside large metabolic networks. | Q55016270 | ||
Biochemistry by numbers: simulation of biochemical pathways with Gepasi 3 | Q73707204 | ||
P433 | issue | 1 | |
P407 | language of work or name | English | Q1860 |
P921 | main subject | software | Q7397 |
P304 | page(s) | 135 | |
P577 | publication date | 2005-06-01 | |
P1433 | published in | BMC Bioinformatics | Q4835939 |
P1476 | title | YANA - a software tool for analyzing flux modes, gene-expression and enzyme activities | |
P478 | volume | 6 |
Q34478962 | 13C isotopologue perturbation studies of Listeria monocytogenes carbon metabolism and its modulation by the virulence regulator PrfA |
Q37147567 | A critical examination of stoichiometric and path-finding approaches to metabolic pathways. |
Q33812153 | A new computational method to split large biochemical networks into coherent subnets |
Q33995148 | A systems approach to identifying correlated gene targets for the loss of colour pigmentation in plants. |
Q34557978 | ADEMA: an algorithm to determine expected metabolite level alterations using mutual information |
Q30777076 | Advances in network-based metabolic pathway analysis and gene expression data integration. |
Q41791571 | Analysis of metabolic subnetworks by flux cone projection. |
Q64986108 | Aspergillus fumigatus Challenged by Human Dendritic Cells: Metabolic and Regulatory Pathway Responses Testify a Tight Battle. |
Q56993611 | Bioinformatics identifies tardigrade molecular adaptations including the DNA-j family and first steps towards dynamical modelling |
Q28539571 | De-novo RNA sequencing and metabolite profiling to identify genes involved in anthocyanin biosynthesis in Korean black raspberry (Rubus coreanus Miquel) |
Q33721327 | Deciphering the intracellular metabolism of Listeria monocytogenes by mutant screening and modelling |
Q33281135 | Effect of carbon source perturbations on transcriptional regulation of metabolic fluxes in Saccharomyces cerevisiae |
Q34580872 | Effect of fasting on the metabolic response of liver to experimental burn injury |
Q35667308 | Elementary Flux Mode Analysis Revealed Cyclization Pathway as a Powerful Way for NADPH Regeneration of Central Carbon Metabolism |
Q38115989 | Elementary flux modes in a nutshell: properties, calculation and applications. |
Q51733274 | Elementary mode analysis reveals that Clostridium acetobutylicum modulates its metabolic strategy under external stress. |
Q37328003 | Elementary mode analysis: a useful metabolic pathway analysis tool for characterizing cellular metabolism |
Q36345811 | From elementary flux modes to elementary flux vectors: Metabolic pathway analysis with arbitrary linear flux constraints. |
Q56993529 | Identification of Antifungal Targets Based on Computer Modeling |
Q33513747 | Inferring branching pathways in genome-scale metabolic networks |
Q24608319 | Inhibition of alanine aminotransferase in silico and in vivo promotes mitochondrial metabolism to impair malignant growth |
Q30480219 | Integrated network reconstruction, visualization and analysis using YANAsquare. |
Q33291241 | Integration of enzyme activities into metabolic flux distributions by elementary mode analysis |
Q47310995 | Linking metabolic network features to phenotypes using sparse group lasso. |
Q38915407 | Metabolic analysis of Chlorobium chlorochromatii CaD3 reveals clues of the symbiosis in 'Chlorochromatium aggregatum'. |
Q39669162 | Metabolic potential of microbial mats and microbialites: Autotrophic capabilities described by an in silico stoichiometric approach from shared genomic resources. |
Q35349814 | Metabolic response of perfused livers to various oxygenation conditions |
Q39573988 | Modeling antibiotic and cytotoxic effects of the dimeric isoquinoline IQ-143 on metabolism and its regulation in Staphylococcus aureus, Staphylococcus epidermidis and human cells |
Q50502346 | Network reduction in metabolic pathway analysis: elucidation of the key pathways involved in the photoautotrophic growth of the green alga Chlamydomonas reinhardtii |
Q41833487 | Pathway analysis of liver metabolism under stressed condition |
Q38118209 | Predictions of enzymatic parameters: a mini-review with focus on enzymes for biofuel |
Q43976166 | Querying metabolism under different physiological constraints |
Q38525312 | Recent advances in elementary flux modes and yield space analysis as useful tools in metabolic network studies. |
Q56987273 | Response to comment on 'Can sugars be produced from fatty acids? A test case for pathway analysis tools' |
Q38059081 | Software applications toward quantitative metabolic flux analysis and modeling |
Q39631090 | Systematic Identification of Anti-Fungal Drug Targets by a Metabolic Network Approach |
Q33347636 | The Systems Biology Research Tool: evolvable open-source software |
Q37751917 | Which metabolic pathways generate and characterize the flux space? A comparison among elementary modes, extreme pathways and minimal generators. |
Search more.