The Chemical Translation Service--a web-based tool to improve standardization of metabolomic reports

peer-reviewed article

The Chemical Translation Service--a web-based tool to improve standardization of metabolomic reports is …
instance of (P31):
scholarly articleQ13442814

External links are
P8978DBLP publication IDjournals/bioinformatics/WohlgemuthHWKF10
P356DOI10.1093/BIOINFORMATICS/BTQ476
P3181OpenCitations bibliographic resource ID4095626
P932PMC publication ID2951090
P698PubMed publication ID20829444
P5875ResearchGate publication ID46191533

P50authorEgon WillighagenQ20895241
Tobias KindQ29052381
Gert WohlgemuthQ29052386
Oliver FiehnQ28540892
P2093author name stringPradeep Kumar Haldiya
P2860cites workMetabolomic profiles delineate potential role for sarcosine in prostate cancer progressionQ24654019
The Chemistry Development Kit (CDK): an open-source Java library for Chemo- and BioinformaticsQ27061829
Proposed minimum reporting standards for chemical analysisQ27921801
How Large Is the Metabolome? A Critical Analysis of Data Exchange Practices in ChemistryQ27921802
Consolidating metabolite identifiers to enable contextual and multi-platform metabolomics data analysisQ27921803
P433issue20
P407language of work or nameEnglishQ1860
P921main subjectidentifierQ853614
metabolomicsQ12149006
P1104number of pages2
P304page(s)2647-8
P577publication date2010-10-15
P1433published inBioinformaticsQ4914910
P1476titleThe Chemical Translation Service--a web-based tool to improve standardization of metabolomic reports
P478volume26

Reverse relations

cites work (P2860)
Q35933571A Computational Solution to Automatically Map Metabolite Libraries in the Context of Genome Scale Metabolic Networks
Q49359410A Landscape of Metabolic Variation across Tumor Types.
Q39795394A decade of advances in metabonomics
Q52350929A review of computational tools for design and reconstruction of metabolic pathways.
Q97648951A substrate-based ontology for human solute carriers
Q30823348Alkemio: association of chemicals with biomedical topics by text and data mining
Q47396430Annotation of Peptide Structures Using SMILES and Other Chemical Codes-Practical Solutions.
Q59157152Assay Tools for Metabolomics
Q27807487Automatic recalibration and processing of tandem mass spectra using formula annotation
Q59575290Bio- and Chemoinformatics Approaches for Metabolomics Data Analysis
Q46961388Chemical Similarity Enrichment Analysis (ChemRICH) as alternative to biochemical pathway mapping for metabolomic datasets
Q28487717Comparative evaluation of open source software for mapping between metabolite identifiers in metabolic network reconstructions: application to Recon 2
Q112297300Comprehensive metabolomic study of the response of HK-2 cells to hyperglycemic hypoxic diabetic-like milieu
Q35829898Computational Metabolomics Operations at BioCyc.org
Q38715258Computational methods to identify metabolic sub-networks based on metabolomic profiles.
Q91254035Creating a Reliable Mass Spectral-Retention Time Library for All Ion Fragmentation-Based Metabolomics
Q91582916Development and application of a HILIC UHPLC-MS method for polar fecal metabolome profiling
Q34308903ECMDB: the E. coli Metabolome Database
Q103794103Effect of diet and intestinal AhR expression on fecal microbiome and metabolomic profiles
Q125446634Employing Genome Mining to Unveil a Potential Contribution of Endophytic Bacteria to Antimicrobial Compounds in the Origanum vulgare L. Essential Oil
Q83232139Essential metabolism for a minimal cell
Q47226631Evaluation and comparison of bioinformatic tools for the enrichment analysis of metabolomics data
Q98228231Finding distinctions between oral cancer and periodontitis using saliva metabolites and machine learning
Q98904257Food Phenotyping: Recording and Processing of Non-Targeted Liquid Chromatography Mass Spectrometry Data for Verifying Food Authenticity
Q64113830Free Accessible Databases as a Source of Information about Food Components and Other Compounds with Anticancer Activity⁻Brief Review
Q92152476From Samples to Insights into Metabolism: Uncovering Biologically Relevant Information in LC-HRMS Metabolomics Data
Q33879028From chromatogram to analyte to metabolite. How to pick horses for courses from the massive web-resources for mass spectral plant metabolomics
Q90304866Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach
Q39078185Identification of biomarkers for apoptosis in cancer cell lines using metabolomics: tools for individualized medicine
Q43363347Identification of novel micropollutants in wastewater by a combination of suspect and nontarget screening
Q90676325Improving lipid mapping in Genome Scale Metabolic Networks using ontologies
Q47840551Integrated Strategy for Unknown EI-MS Identification Using Quality Control Calibration Curve, Multivariate Analysis, EI-MS Spectral Database, and Retention Index Prediction
Q48260803Integrated mass spectrometry imaging and omics workflows on the same tissue section using grid-aided, parafilm-assisted microdissection
Q43066944Integration among databases and data sets to support productive nanotechnology: Challenges and recommendations
Q115707320Integrative Analytical and Computational Strategies for Qualitative and Semi-quantitative Plant Metabolome Characterization
Q28077746Internet Databases of the Properties, Enzymatic Reactions, and Metabolism of Small Molecules-Search Options and Applications in Food Science
Q98784841Ion mobility collision cross-section atlas for known and unknown metabolite annotation in untargeted metabolomics
Q112655415Knowledge-Driven Approaches to Create the MTox700+ Metabolite Panel for Predicting Toxicity
Q60045756Lilikoi: an R package for personalized pathway-based classification modeling using metabolomics data
Q89581398Longitudinal Metabolome-Wide Signals Prior to the Appearance of a First Islet Autoantibody in Children Participating in the TEDDY Study
Q27943500Many InChIs and quite some feat
Q27818910Mass spectral databases for LC/MS- and GC/MS-based metabolomics: State of the field and future prospects
Q46972850MeRy-B, a metabolomic database and knowledge base for exploring plant primary metabolism
Q33930982MeRy-B: a web knowledgebase for the storage, visualization, analysis and annotation of plant NMR metabolomic profiles
Q124974776MetaFetcheR: An R Package for Complete Mapping of Small-Compound Data
Q57265612MetaboRank: network-based recommendation system to interpret and enrich metabolomics results
Q28480894MetaboSearch: tool for mass-based metabolite identification using multiple databases
Q95322476Metabolomics and Multi-Omics Integration: A Survey of Computational Methods and Resources
Q59328996Metabolomics and transcriptomics pathway approach reveals outcome-specific perturbations in COPD
Q37403195Metabolomics reveals broad-scale metabolic perturbations in hyperglycemic mothers during pregnancy
Q112283020Metabolomics study of COVID-19 patients in four different clinical stages
Q57015975Mind the Gap: Mapping Mass Spectral Databases in Genome-Scale Metabolic Networks Reveals Poorly Covered Areas
Q112285421Multi-Enzyme Supplementation Modifies the Gut Microbiome and Metabolome in Breeding Hens
Q92862439Natural Product Target Network Reveals Potential for Cancer Combination Therapies
Q114864892PeakForest: a multi-platform digital infrastructure for interoperable metabolite spectral data and metadata management
Q113750446Pharmaceutical pollution: Prediction of environmental concentrations from national wholesales data
Q57278386PhenoMeNal: Processing and analysis of Metabolomics data in the Cloud
Q61660063PhenoMeNal: Processing and analysis of Metabolomics data in the Cloud
Q37168478Plasma Biomarkers for Monitoring Brain Pathophysiology in FMR1 Premutation Carriers.
Q46091324Plasma metabolic profile delineates roles for neurodegeneration, pro-inflammatory damage and mitochondrial dysfunction in the FMR1 premutation.
Q57425397Predicting Adverse Drug Effects from Literature- and Database-Mined Assertions
Q36739441Recent progress in the development of metabolome databases for plant systems biology.
Q23034460Scientific Lenses to Support Multiple Views over Linked Chemistry Data
Q112286412Stable Isotopes for Tracing Cardiac Metabolism in Diseases
Q63351763Structure Annotation of All Mass Spectra in Untargeted Metabolomics
Q28745273Successes and pitfalls in automated dereplication strategy using liquid chromatography coupled to mass spectrometry data: A CASMI 2016 experience
Q120684762Systems biology elucidates the distinctive metabolic niche filled by the human gut microbe Eggerthella lenta
Q105742243The LOTUS Initiative for Open Natural Products Research: Knowledge Management through Wikidata
Q112143478The LOTUS initiative for open knowledge management in natural products research
Q91203601The Omics Revolution Continues: The Maturation of High-Throughput Biological Data Sources
Q114868265The future of metabolomics in ELIXIR
Q38882086The future of metabolomics in ELIXIR.
Q68414290The metaRbolomics Toolbox in Bioconductor and beyond
Q38686791The self-inhibitory nature of metabolic networks and its alleviation through compartmentalization.
Q39536888Tools for the functional interpretation of metabolomic experiments
Q39706331Toward global metabolomics analysis with hydrophilic interaction liquid chromatography-mass spectrometry: improved metabolite identification by retention time prediction
Q28842733Towards a gold standard: regarding quality in public domain chemistry databases and approaches to improving the situation
Q92153592Uncovering mechanisms of global ocean change effects on the Dungeness crab (Cancer magister) through metabolomics analysis
Q28133251UniChem: a unified chemical structure cross-referencing and identifier tracking system
Q27902274UniChem: extension of InChI-based compound mapping to salt, connectivity and stereochemistry layers
Q28746102Web-based inference of biological patterns, functions and pathways from metabolomic data using MetaboAnalyst
Q24620625YMDB: the Yeast Metabolome Database
Q125458306β-caryophyllene as an attractant for the cacao mirid bug, Helopeltis bakeri Poppius (Hemiptera: Miridae), and chemodiversity of its host plant volatiles

Search more.