Structural insight into the essential PB1–PB2 subunit contact of the influenza virus RNA polymerase

scientific article

Structural insight into the essential PB1–PB2 subunit contact of the influenza virus RNA polymerase is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1038/EMBOJ.2009.138
P3181OpenCitations bibliographic resource ID2206487
P932PMC publication ID2699363
P698PubMed publication ID19461581
P5875ResearchGate publication ID24445704

P2093author name stringAtsushi Kawaguchi
Kyosuke Nagata
Eiji Obayashi
Jeremy R H Tame
Kanako Sugiyama
Sam-Yong Park
Yukari Suzuki
P2860cites workProcessing of X-ray diffraction data collected in oscillation modeQ26778468
Structural basis for the transition from initiation to elongation transcription in T7 RNA polymeraseQ27639673
Structure and nuclear import function of the C-terminal domain of influenza virus polymerase PB2 subunitQ27643860
The structural basis for cap binding by influenza virus polymerase subunit PB2Q27650520
Crystal structure of the polymerase PA(C)-PB1(N) complex from an avian influenza H5N1 virusQ27651109
The structural basis for an essential subunit interaction in influenza virus RNA polymeraseQ27651365
Host Determinant Residue Lysine 627 Lies on the Surface of a Discrete, Folded Domain of Influenza Virus Polymerase PB2 SubunitQ27651972
Crystal structure of an avian influenza polymerase PA(N) reveals an endonuclease active siteQ27653656
The cap-snatching endonuclease of influenza virus polymerase resides in the PA subunitQ27653657
Inference of macromolecular assemblies from crystalline stateQ27860457
SOLVE and RESOLVE: automated structure solution and density modificationQ27860481
Coot: model-building tools for molecular graphicsQ27860505
Main-chain bond lengths and bond angles in protein structuresQ27860635
Refinement of macromolecular structures by the maximum-likelihood methodQ27861011
Automated MAD and MIR structure solutionQ27861114
LIGPLOT: a program to generate schematic diagrams of protein-ligand interactionsQ27861128
Influenza A virus RNA polymerase has the ability to stutter at the polyadenylation site of a viral RNA template during RNA replicationQ27863651
Model suggesting that replication of influenza virus is regulated by stabilization of replicative intermediatesQ27863792
A unique cap(m7GpppXm)-dependent influenza virion endonuclease cleaves capped RNAs to generate the primers that initiate viral RNA transcriptionQ27865288
Identification of two separate domains in the influenza virus PB1 protein involved in the interaction with the PB2 and PA subunits: a model for the viral RNA polymerase structure.Q27867695
RNA-dependent activation of primer RNA production by influenza virus polymerase: different regions of the same protein subunit constitute the two required RNA-binding sitesQ27867719
Characterization of the 1918 influenza virus polymerase genesQ28275749
Differential activation of the influenza virus polymerase via template RNA bindingQ28646351
Generation of influenza A viruses entirely from cloned cDNAsQ29616768
Avian influenza virus (H5N1): a threat to human health.Q30361041
The influenza virus nucleoprotein: a multifunctional RNA-binding protein pivotal to virus replication.Q34119838
Influenza virus polymerase basic protein 1 interacts with influenza virus polymerase basic protein 2 at multiple sites.Q34395842
Mutational analysis identifies functional domains in the influenza A virus PB2 polymerase subunitQ35856754
Evaluation of the genetic stability of the temperature-sensitive PB2 gene mutation of the influenza A/Ann Arbor/6/60 cold-adapted vaccine virus.Q36637590
Determination of influenza virus proteins required for genome replicationQ36793647
Host factors for replication and transcription of the influenza virus genome.Q37126318
Direct evidence that the poly(A) tail of influenza A virus mRNA is synthesized by reiterative copying of a U track in the virion RNA templateQ39550180
A single amino acid mutation in the PA subunit of the influenza virus RNA polymerase inhibits endonucleolytic cleavage of capped RNAsQ39684553
Monoclonal antibodies against influenza virus PB2 and NP polypeptides interfere with the initiation step of viral mRNA synthesis in vitroQ40042184
Evidence that the C-terminal PB2-binding region of the influenza A virus PB1 protein is a discrete alpha-helical domainQ40060750
Two of the three influenza viral polymerase proteins expressed by using baculovirus vectors form a complex in insect cellsQ40131402
Fine mapping of the subunit binding sites of influenza virus RNA polymeraseQ40732397
Molecular assembly of the influenza virus RNA polymerase: determination of the subunit-subunit contact sitesQ41171919
Amino acid residues in the N-terminal region of the PA subunit of influenza A virus RNA polymerase play a critical role in protein stability, endonuclease activity, cap binding, and virion RNA promoter bindingQ43156905
Functional domains of the influenza A virus PB2 protein: identification of NP- and PB1-binding sitesQ45662724
Epitope mapping of cross-reactive monoclonal antibodies specific for the influenza A virus PA and PB2 polypeptidesQ45772602
Complex formation between influenza virus polymerase proteins expressed in Xenopus oocytesQ45843373
P433issue12
P407language of work or nameEnglishQ1860
P304page(s)1803-11
P577publication date2009-06-17
P1433published inThe EMBO JournalQ1278554
P1476titleStructural insight into the essential PB1–PB2 subunit contact of the influenza virus RNA polymerase
P478volume28

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cites work (P2860)
Q372398573D Molecular Modelling Study of the H7N9 RNA-Dependent RNA Polymerase as an Emerging Pharmacological Target
Q42149862A Broad Anti-influenza Hybrid Small Molecule That Potently Disrupts the Interaction of Polymerase Acidic Protein-Basic Protein 1 (PA-PB1) Subunits
Q45362440A novel function of the N-terminal domain of PA in assembly of influenza A virus RNA polymerase
Q34139013A novel functional site in the PB2 subunit of influenza A virus essential for acetyl-CoA interaction, RNA polymerase activity, and viral replication.
Q45353251A peptide derived from the C‐terminus of PB1 inhibits influenza virus replication by interfering with viral polymerase assembly
Q30429748Adaptation of Avian Influenza A Virus Polymerase in Mammals To Overcome the Host Species Barrier
Q38111647Adaptive mutations in the H5N1 polymerase complex
Q47553044Amino acid substitutions affecting aspartic acid 605 and valine 606 decrease the interaction strength between the influenza virus RNA polymerase PB2 '627' domain and the viral nucleoprotein
Q34261973Amino acid substitutions in PB1 of avian influenza viruses influence pathogenicity and transmissibility in chickens
Q38202012Antiviral strategies against influenza virus: towards new therapeutic approaches
Q38011755Antivirals Targeting Influenza A Virus
Q34055461Association of the influenza virus RNA polymerase subunit PB2 with the host chaperonin CCT.
Q38192283Bat-derived influenza-like viruses H17N10 and H18N11.
Q41919256Biochemical characterization of recombinant influenza A polymerase heterotrimer complex: Polymerase activity and mechanisms of action of nucleotide analogs
Q30426032Characterization in vitro and in vivo of a pandemic H1N1 influenza virus from a fatal case.
Q33834096CoESPRIT: a library-based construct screening method for identification and expression of soluble protein complexes
Q28084005Compounds with anti-influenza activity: present and future of strategies for the optimal treatment and management of influenza. Part II: Future compounds against influenza virus
Q27680799Conformational polymorphism of m7GTP in crystal structure of the PB2 middle domain from human influenza A virus
Q30360137Conserved features of the PB2 627 domain impact influenza virus polymerase function and replication
Q39730929Correlation between polymerase activity and pathogenicity in two duck H5N1 influenza viruses suggests that the polymerase contributes to pathogenicity
Q36711056Crystallization and X-ray crystallographic analysis of the cap-binding domain of influenza A virus H1N1 polymerase subunit PB2
Q34189305Detecting Remote Sequence Homology in Disordered Proteins: Discovery of Conserved Motifs in the N-Termini of Mononegavirales phosphoproteins
Q34624418Disruption of the viral polymerase complex assembly as a novel approach to attenuate influenza A virus
Q91800691Diversity of A(H5N1) clade 2.3.2.1c avian influenza viruses with evidence of reassortment in Cambodia, 2014-2016
Q34269400Emerging antiviral resistant strains of influenza A and the potential therapeutic targets within the viral ribonucleoprotein (vRNP) complex
Q24567974Enzymology of RNA cap synthesis
Q38061423Evasion of influenza A viruses from innate and adaptive immune responses.
Q27319771Evidence for a Novel Mechanism of Influenza Virus-Induced Type I Interferon Expression by a Defective RNA-Encoded Protein
Q36409349Evolutionary conservation of influenza A PB2 sequences reveals potential target sites for small molecule inhibitors
Q40075092Genetic and codon usage bias analyses of polymerase genes of equine influenza virus and its relation to evolution.
Q40060300Genetic variation and co-evolutionary relationship of RNA polymerase complex segments in influenza A viruses
Q36523913Glycine at Position 622 in PB1 Contributes to the Virulence of H5N1 Avian Influenza Virus in Mice
Q34303782HMGB1 protein binds to influenza virus nucleoprotein and promotes viral replication
Q33799724Hantavirus nucleocapsid protein has distinct m7G cap- and RNA-binding sites
Q36433861Identification of a Novel Viral Protein Expressed from the PB2 Segment of Influenza A Virus
Q28476315Identification of a PA-binding peptide with inhibitory activity against influenza A and B virus replication
Q36191196Identification of a novel small-molecule compound targeting the influenza A virus polymerase PB1-PB2 interface.
Q28743238Identification of high-affinity PB1-derived peptides with enhanced affinity to the PA protein of influenza A virus polymerase
Q45363861Identification of influenza virus inhibitors which disrupt of viral polymerase protein-protein interactions
Q92638354Identifying genetic determinants of complex phenotypes from whole genome sequence data
Q89578518Impaired Nuclear Export of the Ribonucleoprotein Complex and Virus-Induced Cytotoxicity Combine to Restrict Propagation of the A/Duck/Malaysia/02/2001 (H9N2) Virus in Human Airway Cells
Q38325400Influence of PB2 host-range determinants on the intranuclear mobility of the influenza A virus polymerase
Q39224928Influenza A polymerase subunit PB2 possesses overlapping binding sites for polymerase subunit PB1 and human MAVS proteins.
Q34121115Influenza A virus polymerase: structural insights into replication and host adaptation mechanisms
Q36286466Influenza A virus preferentially snatches noncoding RNA caps
Q33953132Influenza A virus-generated small RNAs regulate the switch from transcription to replication
Q30791826Influenza virus RNA polymerase: insights into the mechanisms of viral RNA synthesis
Q38444279Influenza virus polymerase: Functions on host range, inhibition of cellular response to infection and pathogenicity.
Q33646273Innate immune evasion strategies of influenza viruses
Q34574076Integrating computational modeling and functional assays to decipher the structure-function relationship of influenza virus PB1 protein
Q34695795Interaction of the influenza A virus polymerase PB2 C-terminal region with importin alpha isoforms provides insights into host adaptation and polymerase assembly.
Q30421691Interferon-Inducible Protein Mx1 Inhibits Influenza Virus by Interfering with Functional Viral Ribonucleoprotein Complex Assembly
Q38384758Learning from structure-based drug design and new antivirals targeting the ribonucleoprotein complex for the treatment of influenza
Q39719150Limited compatibility of polymerase subunit interactions in influenza A and B viruses
Q36281749Molecular Determinants of Virulence and Stability of a Reporter-Expressing H5N1 Influenza A Virus
Q39398090Molecular interactions and trafficking of influenza A virus polymerase proteins analyzed by specific monoclonal antibodies.
Q38057050Mutations to A/Puerto Rico/8/34 PB1 gene improves seasonal reassortant influenza A virus growth kinetics
Q35011532New prospects for the rational design of antivirals
Q28080554New small-molecule drug design strategies for fighting resistant influenza A
Q30382441Nuclear import and assembly of influenza A virus RNA polymerase studied in live cells by fluorescence cross-correlation spectroscopy.
Q42221157Optimization of small-molecule inhibitors of influenza virus polymerase: from thiophene-3-carboxamide to polyamido scaffolds
Q39582914PB1-mediated virulence attenuation of H5N1 influenza virus in mice is associated with PB2
Q35066744PB2 segment promotes high-pathogenicity of H5N1 avian influenza viruses in mice
Q30374833Phylogenetic Analysis and Functional Characterization of the Influenza A H5N1 PB2 Gene.
Q38832421Polycistronic Expression of the Influenza A Virus RNA-Dependent RNA Polymerase by Using the Thosea asigna Virus 2A-Like Self-Processing Sequence
Q30410407Polymerase activity of hybrid ribonucleoprotein complexes generated from reassortment between 2009 pandemic H1N1 and seasonal H3N2 influenza A viruses.
Q30234943Progress of small molecular inhibitors in the development of anti-influenza virus agents
Q38100767RNA synthetic mechanisms employed by diverse families of RNA viruses
Q30397586Rapid acquisition of polymorphic virulence markers during adaptation of highly pathogenic avian influenza H5N8 virus in the mouse
Q26863710Recent progress in structure-based anti-influenza drug design
Q38335070Recognition of Cap Structure by Influenza B Virus RNA Polymerase Is Less Dependent on the Methyl Residue than Recognition by Influenza A Virus Polymerase
Q35077609Replication-coupled and host factor-mediated encapsidation of the influenza virus genome by viral nucleoprotein.
Q40403931Screening for Novel Small-Molecule Inhibitors Targeting the Assembly of Influenza Virus Polymerase Complex by a Bimolecular Luminescence Complementation-Based Reporter System
Q27684927Structural analysis of H1N1 and H7N9 influenza A virus PA in the absence of PB1
Q27671357Structural and Biochemical Basis for Development of Influenza Virus Inhibitors Targeting the PA Endonuclease
Q27676615Structural and Functional Characterization of K339T Substitution Identified in the PB2 Subunit Cap-binding Pocket of Influenza A Virus
Q34178189Structural and functional characterization of an influenza virus RNA polymerase-genomic RNA complex
Q40370553Structural characterization of recombinant IAV polymerase reveals a stable complex between viral PA-PB1 heterodimer and host RanBP5.
Q39099407Structural insights into RNA synthesis by the influenza virus transcription-replication machine
Q38090250Structure and assembly of the influenza A virus ribonucleoprotein complex
Q42181164Structure of influenza A polymerase bound to the viral RNA promoter
Q39580310Structure-based drug discovery for combating influenza virus by targeting the PA-PB1 interaction
Q30387969Structures of influenza A proteins and insights into antiviral drug targets.
Q30369689Survival analysis of infected mice reveals pathogenic variations in the genome of avian H1N1 viruses
Q39466061Targeting of the Influenza A Virus Polymerase PB1-PB2 Interface Indicates Strain-Specific Assembly Differences
Q28071809The Influenza Virus Polymerase Complex: An Update on Its Structure, Functions, and Significance for Antiviral Drug Design
Q27680700The N-Terminal Domain of PA from Bat-Derived Influenza-Like Virus H17N10 Has Endonuclease Activity
Q28542440The N-terminal fragment of a PB2 subunit from the influenza A virus (A/Hong Kong/156/1997 H5N1) effectively inhibits RNP activity and viral replication
Q42245125The N-terminal region of influenza virus polymerase PB1 adjacent to the PA binding site is involved in replication but not transcription of the viral genome
Q34055501The PB2 subunit of the influenza virus RNA polymerase affects virulence by interacting with the mitochondrial antiviral signaling protein and inhibiting expression of beta interferon
Q28084418The RNA synthesis machinery of negative-stranded RNA viruses
Q39093232The RNA-dependent RNA polymerase of the influenza A virus
Q37847896The influenza virus RNA synthesis machine: advances in its structure and function
Q28354200Tracking the Evolution of Polymerase Genes of Influenza A Viruses during Interspecies Transmission between Avian and Swine Hosts
Q30424508Virulence Determinants of Pandemic A(H1N1)2009 Influenza Virus in a Mouse Model
Q27469050mRNA capping: biological functions and applications

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