Evo-Devo and an Expanding Evolutionary Synthesis: A Genetic Theory of Morphological Evolution

scientific article (publication date: July 2008)

Evo-Devo and an Expanding Evolutionary Synthesis: A Genetic Theory of Morphological Evolution is …
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scholarly articleQ13442814

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P356DOI10.1016/J.CELL.2008.06.030
P8608Fatcat IDrelease_p5tmkyljbzhfvlomi4bbj4mtdi
P3181OpenCitations bibliographic resource ID342132
P698PubMed publication ID18614008
P5875ResearchGate publication ID5238822

P2093author name stringSean B. Carroll
P2860cites workEvolution at two levels: on genes and formQ21563630
Repetitive and Non-Repetitive DNA Sequences and a Speculation on the Origins of Evolutionary NoveltyQ28250804
P433issue1
P407language of work or nameEnglishQ1860
P921main subjectevolutionary developmental biologyQ1044484
P304page(s)25-36
P577publication date2008-07-01
P1433published inCellQ655814
P1476titleEvo-Devo and an Expanding Evolutionary Synthesis: A Genetic Theory of Morphological Evolution
P478volume134

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Q37821537Genes, hormones, and circuits: an integrative approach to study the evolution of social behavior.
Q35560645Genetic Architecture of Abdominal Pigmentation in Drosophila melanogaster
Q35675860Genetic Changes to a Transcriptional Silencer Element Confers Phenotypic Diversity within and between Drosophila Species
Q48157134Genetic Determinants of the Network of Primary Metabolism and Their Relationships to Plant Performance in a Maize Recombinant Inbred Line Population.
Q27308976Genetic Dissection of Dual Roles for the Transcription Factor six7 in Photoreceptor Development and Patterning in Zebrafish
Q57444461Genetic Dissection of a Supergene Implicates in Craniofacial Evolution of Threespine Sticklebacks
Q93380663Genetic accommodation and the role of ancestral plasticity in the evolution of insect eusociality
Q57138963Genetic and Molecular Basis of Feather Diversity in Birds
Q42690283Genetic and developmental basis for parallel evolution and its significance for hominoid evolution.
Q37615900Genetic and molecular insights into the development and evolution of sexual dimorphism
Q46561480Genetic and neural bases for species-specific behavior in Drosophila species
Q34376835Genetic basis of differential opsin gene expression in cichlid fishes
Q33361944Genetic control of morphometric diversity in the maize shoot apical meristem
Q36445279Genetic correlates of the evolving primate brain.
Q34549855Genetic variation and expression diversity between grain and sweet sorghum lines.
Q57972113Genetics of alternative splicing evolution during sunflower domestication
Q64275686Genetics of scapula and pelvis development: An evolutionary perspective
Q36291409Genetics on the Fly: A Primer on the Drosophila Model System
Q46791394Genoarchitecture of the rostral hindbrain of a shark: basis for understanding the emergence of the cerebellum at the agnathan-gnathostome transition
Q53283591Genome Sequencing in the Clinic: The Past, Present, and Future of Genomic Medicine.
Q21090181Genome sequence of the pea aphid Acyrthosiphon pisum
Q91824250Genome-Wide Genotype-Expression Relationships Reveal Both Copy Number and Single Nucleotide Differentiation Contribute to Differential Gene Expression between Stickleback Ecotypes
Q31118052Genome-scale transcriptional analyses of first-generation interspecific sunflower hybrids reveals broad regulatory compatibility
Q37504912Genome-wide analysis of promoters: clustering by alignment and analysis of regular patterns
Q35687349Genome-wide analysis of signatures of selection in populations of African honey bees (Apis mellifera) using new web-based tools
Q85084200Genome-wide polymorphisms show unexpected targets of natural selection
Q46616327Genome-wide recombination dynamics are associated with phenotypic variation in maize
Q35859806Genomic Patterns of Positive Selection at the Origin of Rust Fungi
Q22065894Genomic analysis of organismal complexity in the multicellular green alga Volvox carteri
Q37626198Genomic analysis reveals major determinants of cis-regulatory variation in Capsella grandiflora.
Q33994854Genomic evidence for adaptation by gene duplication.
Q38825825Genomic features of human limb specific enhancers
Q33530132Genomic hotspots for adaptation: the population genetics of Müllerian mimicry in Heliconius erato
Q34140433Genomic patterns of pleiotropy and the evolution of complexity
Q34493603Genomic variation and its impact on gene expression in Drosophila melanogaster
Q34297992Genomics: ENCODE explained
Q28749062Genotype-phenotype mapping and the end of the 'genes as blueprint' metaphor
Q35877335Global expression differences and tissue specific expression differences in rice evolution result in two contrasting types of differentially expressed genes
Q34764201Glycogen and glucose metabolism are essential for early embryonic development of the red flour beetle Tribolium castaneum
Q28595854Grasses use an alternatively wired bHLH transcription factor network to establish stomatal identity
Q51492663Gynandromorphs as indicators of modularity and evolvability in ants.
Q36208009Heads, Shoulders, Elbows, Knees, and Toes: Modular Gdf5 Enhancers Control Different Joints in the Vertebrate Skeleton
Q92963212Heterochronic shifts and conserved embryonic shape underlie crocodylian craniofacial disparity and convergence
Q37430025Heterogeneous tempo and mode of conserved noncoding sequence evolution among four mammalian orders
Q35651257Heterozygote advantage as a natural consequence of adaptation in diploids
Q51872521High conservation of transcription factor binding and evidence for combinatorial regulation across six Drosophila species.
Q37152703High nucleotide divergence in developmental regulatory genes contrasts with the structural elements of olfactory pathways in caenorhabditis
Q52729658High-dimensional variance partitioning reveals the modular genetic basis of adaptive divergence in gene expression during reproductive character displacement.
Q50080966Highly Expressed Genes Are Preferentially Co-Opted for C4 Photosynthesis.
Q33829536Homoplasy: from detecting pattern to determining process and mechanism of evolution.
Q37314294Honey bee aggression supports a link between gene regulation and behavioral evolution.
Q55052335Horizontal gene transfer in evolution: facts and challenges.
Q38982331How plasticity, genetic assimilation and cryptic genetic variation may contribute to adaptive radiations.
Q35057688How to make stripes: deciphering the transition from non-periodic to periodic patterns in Drosophila segmentation
Q37982757Hox gene evolution: multiple mechanisms contributing to evolutionary novelties
Q36927786Hox genes, evo-devo, and the case of the ftz gene
Q28512990Hox11 genes establish synovial joint organization and phylogenetic characteristics in developing mouse zeugopod skeletal elements
Q28728622Human developmental enhancers conserved between deuterostomes and protostomes
Q42284429Human evolution: the non-coding revolution
Q38104719Human genetic variation within neural crest enhancers: molecular and phenotypic implications
Q42073649Human-specific CpG "beacons" identify loci associated with human-specific traits and disease
Q24625593Human-specific loss of regulatory DNA and the evolution of human-specific traits
Q46044330Hundreds of Genes Experienced Convergent Shifts in Selective Pressure in Marine Mammals
Q42108477Hundreds of conserved non-coding genomic regions are independently lost in mammals
Q91768067Hybrid gene misregulation in multiple developing tissues within a recent adaptive radiation of Cyprinodon pupfishes
Q41841844Hybrid incompatibility despite pleiotropic constraint in a sequence-based bioenergetic model of transcription factor binding
Q40972113Identification of Lineage-Specific Cis-Regulatory Modules Associated with Variation in Transcription Factor Binding and Chromatin Activity Using Ornstein-Uhlenbeck Models
Q30441416Identification of biologically relevant enhancers in human erythroid cells
Q35669176Identification of cis-Regulatory Elements in the dmyc Gene of Drosophila Melanogaster
Q38342841Identification of conserved Drosophila-specific euchromatin-restricted non-coding sequence motifs
Q40991008Identification of p53-target genes in Danio rerio
Q60930390Important cardiac transcription factor genes are accompanied by bidirectional long non-coding RNAs
Q38508471In silico analysis of transcription factor repertoire and prediction of stress responsive transcription factors in soybean
Q46131762Inaugural meeting of the Pan-American Society for Evolutionary Developmental Biology report: the importance of diversity in a multidisciplinary field.
Q38714433Incorporating tree-thinking and evolutionary time scale into developmental biology
Q33521284Increased expression and protein divergence in duplicate genes is associated with morphological diversification
Q28654733Increased rate of hair keratin gene loss in the cetacean lineage
Q58709743Independent erosion of conserved transcription factor binding sites points to shared hindlimb, vision and external testes loss in different mammals
Q35621215Independent recruitments of a translational regulator in the evolution of self-fertile nematodes
Q88698225Induced expression of a vestigial sexual signal
Q48549985Inferring regulatory change from gene expression: the confounding effects of tissue scaling.
Q42180396Information Integration and Energy Expenditure in Gene Regulation
Q99555113Inside the supergene of the bird with four sexes
Q34064242Insights into Hox protein function from a large scale combinatorial analysis of protein domains
Q38111733Insights into biomedicine from animal adaptations
Q28658803Insights into the development and evolution of exaggerated traits using de novo transcriptomes of two species of horned scarab beetles
Q28655660Insights into the molecular mechanisms underlying diversified wing venation among insects
Q38610804Insights on the role of hox genes in the emergence of the pentadactyl ground state
Q37008724Integrated analysis of the Plasmodium species transcriptome.
Q33921190Integrated genome-scale prediction of detrimental mutations in transcription networks
Q26862026Integrating evo-devo with ecology for a better understanding of phenotypic evolution
Q34645531Integrative analysis of young genes, positively selected genes and lncRNAs in the development of Drosophila melanogaster
Q22065599Integrative annotation of variants from 1092 humans: application to cancer genomics
Q35662207Intercalation of a new tier of transcription regulation into an ancient circuit
Q38687739Interspecies Gene Transfer as a Method for Understanding the Genetic Basis for Evolutionary Change: Progress, Pitfalls, and Prospects
Q46357104Intra and Interspecific Variations of Gene Expression Levels in Yeast Are Largely Neutral: (Nei Lecture, SMBE 2016, Gold Coast).
Q36079673Intragenomic evolution of a transcriptional enhancer in the genome of Strongylocentrotus purpuratus
Q28607315Introduction to 'Origin and evolution of the nervous system'
Q56534801Introgression of regulatory alleles and a missense coding mutation drive plumage pattern diversity in the rock pigeon
Q35252467Is genetic evolution predictable?
Q39487444Isochores and the regulation of gene expression in the human genome
Q26858874Key questions in the genetics and genomics of eco-evolutionary dynamics
Q42637764Kinetochore inactivation by expression of a repressive mRNA.
Q91780636LCO Receptors Involved in Arbuscular Mycorrhiza Are Functional for Rhizobia Perception in Legumes
Q42775735Large-scale coding sequence change underlies the evolution of postdevelopmental novelty in honey bees.
Q35208575Latent homology and convergent regulatory evolution underlies the repeated emergence of yeasts.
Q38050727Lessons from flower colour evolution on targets of selection
Q39056011Limb patterning genes and heterochronic development of the emu wing bud.
Q58606926Lineage-Specific Expression Divergence in Grasses Is Associated with Male Reproduction, Host-Pathogen Defense, and Domestication.
Q34987289Lineage-specific transcription factors and the evolution of gene regulatory networks
Q37950307Linking genotypes, phenotypes, and fitness in wild primate populations
Q28131764Long non-coding RNAs: insights into functions
Q30420389Looking under the lamp post: neither fruitless nor doublesex has evolved to generate divergent male courtship in Drosophila
Q91124783MIPS: Functional dynamics in evolutionary pathways of plant kingdom
Q41109945Macroevolutionary shifts of WntA function potentiate butterfly wing-pattern diversity
Q28744388Major-effect alleles at relatively few loci underlie distinct vernalization and flowering variation in Arabidopsis accessions
Q35883356Making quantitative morphological variation from basic developmental processes: Where are we? The case of the Drosophila wing.
Q35935229Making sense of transcription networks
Q58752637Mandible exosomal ssc-mir-133b regulates tooth development in miniature swine via endogenous apoptosis
Q28661631Many human accelerated regions are developmental enhancers
Q35055335Mapping gene expression in two Xenopus species: evolutionary constraints and developmental flexibility.
Q28284117Mechanisms and dynamics of orphan gene emergence in insect genomes
Q34461874Mechanisms of bacterial morphogenesis: evolutionary cell biology approaches provide new insights.
Q97069914Megaevolutionary dynamics and the timing of evolutionary innovation in reptiles
Q33489634Melanism in peromyscus is caused by independent mutations in agouti
Q47760970Metapodial or phalanx? An evolutionary and developmental perspective on the homology of the first ray's proximal segment.
Q39028411MicroRNA sequence variation potentially contributes to within-species functional divergence in the nematode Caenorhabditis briggsae
Q37088122Microinjection for Transgenesis and Genome Editing in Threespine Sticklebacks
Q44500470Midline signaling and evolution of the forebrain in chordates: a focus on the lamprey Hedgehog case
Q46321004Model Clades Versus Model Species: Anolis Lizards as an Integrative Model of Anatomical Evolution
Q43767144Modeling phenotypic plasticity in growth trajectories: a statistical framework
Q24619105Modeling recent human evolution in mice by expression of a selected EDAR variant
Q41308513Modelling the evolution of transcription factor binding preferences in complex eukaryotes.
Q28657852Modular skeletal evolution in sticklebacks is controlled by additive and clustered quantitative trait Loci
Q37494809Modularity, comparative embryology and evo-devo: developmental dissection of evolving body plans
Q64970875Modulation and Evolution of Animal Development through microRNA Regulation of Gene Expression.
Q37765236Molecular Haeckel
Q103836777Molecular and evolutionary processes generating variation in gene expression
Q35531971Molecular conservation of metazoan gut formation: evidence from expression of endomesoderm genes in Capitella teleta (Annelida)
Q33548094Molecular evidence for increased regulatory conservation during metamorphosis, and against deleterious cascading effects of hybrid breakdown in Drosophila
Q92463016Molecular evolution across developmental time reveals rapid divergence in early embryogenesis
Q34775455Molecular hyperdiversity defines populations of the nematode Caenorhabditis brenneri
Q64212074Molecular to organismal chirality is induced by the conserved myosin 1D
Q35207592Morphological evolution caused by many subtle-effect substitutions in regulatory DNA.
Q28740621Morphological evolution in land plants: new designs with old genes
Q28742902Morphology and behaviour: functional links in development and evolution
Q46449928Morphomechanics and Developmental Constraints in the Evolution of Ammonites Shell Form
Q27348054Mosaic hoxb4a neuronal pleiotropism in zebrafish caudal hindbrain
Q55283971Motifome comparison between modern human, Neanderthal and Denisovan.
Q33935108Mouse and zebrafish Hoxa3 orthologues have nonequivalent in vivo protein function
Q33850562Multicilin drives centriole biogenesis via E2f proteins
Q90099994Multiple Changes Underlie Allelic Divergence of CUP2 Between Saccharomyces Species
Q89531563Multiple Loci Control Eyespot Number Variation on the Hindwings of Bicyclus anynana Butterflies
Q51066519Multiple genomic changes associated with reorganization of gene regulation and adaptation in yeast.
Q60044033Multiple trans QTL and one cis-regulatory deletion are associated with the differential expression of cone opsins in African cichlids
Q46244094Natural selection beyond genes: Identification and analyses of evolutionarily conserved elements in the genome of the collared flycatcher (Ficedula albicollis).
Q34529805Natural selection drives rapid evolution of mouse embryonic heart enhancers
Q33881377Natural selection on cis and trans regulation in yeasts
Q33553273Naturally occurring deletions of hunchback binding sites in the even-skipped stripe 3+7 enhancer
Q26851735Navigating the transcriptional roadmap regulating plant secondary cell wall deposition
Q39814659Nematode orphan genes are adopted by conserved regulatory networks and find a home in ecology
Q41821042Networks of bZIP protein-protein interactions diversified over a billion years of evolution
Q30862451Neurodevelopment genes in lampreys reveal trends for forebrain evolution in craniates
Q38045819New genes expressed in human brains: implications for annotating evolving genomes
Q39043813New genes from old: asymmetric divergence of gene duplicates and the evolution of development
Q92363377New insights into the development of the human cerebral cortex
Q41591005Non-base-contacting residues enable kaleidoscopic evolution of metazoan C2H2 zinc finger DNA binding
Q38109600Non-coding RNAs in homeostasis, disease and stress responses: an evolutionary perspective
Q48224361Non-specificity of transcription factor function in Drosophila melanogaster.
Q33981298Nonlinear fitness landscape of a molecular pathway
Q26315280Nothing in Evolution Makes Sense Except in the Light of Genomics: Read-Write Genome Evolution as an Active Biological Process
Q83225870Novel genetic loci affecting facial shape variation in humans
Q28752560On the independent origins of complex brains and neurons
Q46368482One gene, multiple alleles: insights into the microevolution of pigmentation polymorphisms.
Q46207988One-two punch mechanism of gene repression: a fresh perspective on gene regulation.
Q58763805Ontogenetic and phylogenetic simplification during white stripe evolution in clownfishes
Q45287416Ontogeny of the larynx and flight ability in Jamaican fruit bats (Phyllostomidae) with considerations for the evolution of echolocation
Q48607301Organization of the gymnotiform fish pallium in relation to learning and memory: IV. Expression of conserved transcription factors and implications for the evolution of dorsal telencephalon.
Q92955467Origins and evolutionary consequences of ancient endogenous retroviruses
Q34873546Origins of context-dependent gene repression by capicua
Q44593074Origins of multicellular complexity: Volvox and the volvocine algae
Q46325299Parallel embryonic transcriptional programs evolve under distinct constraints and may enable morphological conservation amidst adaptation
Q34302452Parallel molecular evolution in an herbivore community
Q28831431Parallelism and Epistasis in Skeletal Evolution Identified through Use of Phylogenomic Mapping Strategies
Q38877363Partner abundance controls mutualism stability and the pace of morphological change over geologic time
Q28659986Patterns of morphological variation in enamel-dentin junction and outer enamel surface of human molars
Q54328948Perturbation of the interaction between Gal4p and Gal80p of the Saccharomyces cerevisiae GAL switch results in altered responses to galactose and glucose.
Q35004344Pervasive transcription of the eukaryotic genome: functional indices and conceptual implications
Q35616518Phenotype accessibility and noise in random threshold gene regulatory networks
Q58568474Phenotype loss is associated with widespread divergence of the gene regulatory landscape in evolution
Q95360872Phenotypic Nonspecificity as the Result of Limited Specificity of Transcription Factor Function
Q28606853Phenotypic plasticity and modularity allow for the production of novel mosaic phenotypes in ants
Q90148952Photoreceptor Activity Contributes to Contrasting Responses to Shade in Cardamine and Arabidopsis Seedlings
Q39734178Phylogenetic and size constrains on cranial ontogenetic allometry of spiny rats (Echimyidae, Rodentia).
Q33586257Phylogeny disambiguates the evolution of heat-shock cis-regulatory elements in Drosophila
Q28652126Phylostratigraphic profiles in zebrafish uncover chordate origins of the vertebrate brain
Q28708481Phylostratigraphic profiles reveal a deep evolutionary history of the vertebrate head sensory systems
Q27311039Phylum-Level Conservation of Regulatory Information in Nematodes despite Extensive Non-coding Sequence Divergence
Q33730665Pigmentation pathway evolution after whole-genome duplication in fish
Q37552556Pleiotropic constraints, expression level, and the evolution of miRNA sequences
Q41613292Pleiotropy constrains the evolution of protein but not regulatory sequences in a transcription regulatory network influencing complex social behaviors.
Q47669345Pod shattering resistance associated with domestication is mediated by a NAC gene in soybean
Q30442055Polyandry and sex-specific gene expression
Q33739938Polygenic and directional regulatory evolution across pathways in Saccharomyces
Q51615517Population genetics, pleiotropy, and the preferential fixation of mutations during adaptive evolution.
Q94512665Population-Specific Genetic and Expression Differentiation in Europeans
Q40013436Positive Selection and Centrality in the Yeast and Fly Protein-Protein Interaction Networks
Q35381435Positive selection and functional divergence of R2R3-MYB paralogous genes expressed in inflorescence buds of Scutellaria species (Labiatae).
Q55513021Post-translational buffering leads to convergent protein expression levels between primates.
Q36175231Potential for evolution of complex defense strategies in a multi-scale model of virus-host coevolution
Q47359793Potential genetic bases of morphological evolution in the triassic fish Saurichthys
Q37931167Pou5f1/oct4 in pluripotency control: insights from zebrafish
Q64060988Precise staging of beetle horn formation in Trypoxylus dichotomus reveals the pleiotropic roles of doublesex depending on the spatiotemporal developmental contexts
Q30664296Predator strike shapes antipredator phenotype through new genetic interactions in water striders
Q64934473Predominance of cis-regulatory changes in parallel expression divergence of sticklebacks.
Q28743722Primer and interviews: molecular mechanisms of morphological evolution
Q28750457Processed pseudogenes: the 'fossilized footprints' of past gene expression
Q42334610Progressive Loss of Function in a Limb Enhancer during Snake Evolution
Q30354501Protein change in plant evolution: tracing one thread connecting molecular and phenotypic diversity
Q42845318Protein evolution in cell and tissue development: going beyond sequence and transcriptional analysis
Q37018484Proximate and ultimate causes of variable visual sensitivities: Insights from cichlid fish radiations.
Q28661921Punctuated emergences of genetic and phenotypic innovations in eumetazoan, bilaterian, euteleostome, and hominidae ancestors
Q54956886Q&A: How do gene regulatory networks control environmental responses in plants?
Q52745420Q(ST) < F(ST) As a signature of canalization.
Q50623912Quantifying the impact of development on phenotypic variation and evolution.
Q56979102Quantitative Modulation of Polycomb Silencing Underlies Natural Variation in Vernalization
Q95930780Quantitative analysis of Y-Chromosome gene expression across 36 human tissues
Q36015167Quantitative comparison of cis-regulatory element (CRE) activities in transgenic Drosophila melanogaster
Q34423553Quantitative genome-wide enhancer activity maps for five Drosophila species show functional enhancer conservation and turnover during cis-regulatory evolution
Q47725224Quantity, Not Quality: Rapid Adaptation in a Polygenic Trait Proceeded Exclusively through Expression Differentiation
Q91765624REforge Associates Transcription Factor Binding Site Divergence in Regulatory Elements with Phenotypic Differences between Species
Q34645191RNA sequencing reveals small RNAs differentially expressed between incipient Japanese threespine sticklebacks
Q38755649RNA-seq reveals conservation of function among the yolk sacs of human, mouse, and chicken
Q38819261Rapid and parallel adaptive evolution of the visual system of Neotropical Midas cichlid fishes.
Q35127076Rapid evolutionary rewiring of a structurally constrained eye enhancer
Q37398886Rapid sequence evolution of transcription factors controlling neuron differentiation in Caenorhabditis
Q38724850Rational design of an artificial genetic switch: Co-option of the H-NS-repressed proU operon by the VirB virulence master regulator
Q47583964Reconstructing gene histories in Ascomycota fungi
Q36915417Recruitment and remodeling of an ancient gene regulatory network during land plant evolution
Q34979408Recurrent modification of a conserved cis-regulatory element underlies fruit fly pigmentation diversity
Q92406331Red Light/Green Light, a Dual Fluorescent Protein Reporter System To Study Enhancer-Promoter Specificity in Drosophila
Q92176963Redundant and Cryptic Enhancer Activities of the Drosophila yellow Gene
Q42452060Regional expression of Pax7 in the brain of Xenopus laevis during embryonic and larval development
Q88617826Regulatory Divergence in Wound-Responsive Gene Expression between Domesticated and Wild Tomato
Q64079221Regulatory Diversification of INDEHISCENT in the Capsella Genus Directs Variation in Fruit Morphology
Q51580008Regulatory evolution through divergence of a phosphoswitch in the transcription factor CEBPB.
Q42634646Regulatory remodeling in the allo-tetraploid frog Xenopus laevis
Q41987123Regulatory revolution: evolving the "anti-LacI" repressor
Q37143360Reorganisation of Hoxd regulatory landscapes during the evolution of a snake-like body plan
Q88775148Repeated Cis-Regulatory Tuning of a Metabolic Bottleneck Gene during Evolution
Q28587652Reptilian heart development and the molecular basis of cardiac chamber evolution
Q36122766Reshaping of the maize transcriptome by domestication.
Q45888253Resources and strategies to integrate the study of ethical, legal, and social implications of genetics into the undergraduate curriculum
Q42679398Retinoic acid-dependent establishment of positional information in the hindbrain was conserved during vertebrate evolution.
Q35096190Retroviruses facilitate the rapid evolution of the mammalian placenta.
Q51375253Rewiring and dosing of systems modules as a design approach for synthetic mammalian signaling networks.
Q34302428Rocking the foundations of molecular genetics
Q45979499Role of tomato BRANCHED1-like genes in the control of shoot branching.
Q38367031Role of transcriptional regulation in the evolution of plant phenotype: A dynamic systems approach
Q48381349Russian comparative embryology takes form: a conceptual metamorphosis toward "evo-devo".
Q42374953SHH signaling directed by two oral epithelium-specific enhancers controls tooth and oral development.
Q36447170SP transcription factor paralogs and DNA-binding sites coevolve and adaptively converge in mammals and birds
Q95940290Sculpting new structures
Q37215247Segmental duplications contribute to gene expression differences between humans and chimpanzees
Q37418601Segmental folding of chromosomes: a basis for structural and regulatory chromosomal neighborhoods?
Q28658974Selection and constraint underlie irreversibility of tooth loss in cypriniform fishes.
Q46347717Selective sweep of a cis-regulatory sequence in a non-African population of Drosophila melanogaster
Q27325642Sequencing of Pax6 loci from the elephant shark reveals a family of Pax6 genes in vertebrate genomes, forged by ancient duplications and divergences
Q22122079Sequencing of the sea lamprey (Petromyzon marinus) genome provides insights into vertebrate evolution
Q34388337Sex linkage, sex-specific selection, and the role of recombination in the evolution of sexually dimorphic gene expression
Q28480390Sex pheromone evolution is associated with differential regulation of the same desaturase gene in two genera of leafroller moths
Q33618915Sex-specific and lineage-specific alternative splicing in primates
Q90601310Sex-specific evolution of relative leg size in Drosophila prolongata results from changes in the intersegmental coordination of tissue growth
Q46466273Sex-specific repression of dachshund is required for Drosophila sex comb development
Q47153869Shaping of inner ear sensory organs through antagonistic interactions between Notch signalling and Lmx1a
Q51418660Sheep genome functional annotation reveals proximal regulatory elements contributed to the evolution of modern breeds.
Q28608547Signals from the brain induce variation in avian facial shape
Q38852988Signals of selection in conditionally expressed genes in the diversification of three horned beetle species.
Q46610898Signatures of functional constraint at Fgfr1a Genes in schizothoracine fishes (Pisces: Cypriniformes): The dermal skeleton variation adapted to high-altitude environments
Q52341747Significance of whole-genome duplications on the emergence of evolutionary novelties.
Q34279159Single amino acid change alters the ability to specify male or female organ identity.
Q33855467Six1 is a key regulator of the developmental and evolutionary architecture of sensory neurons in craniates
Q38548836Size-dependent regulation of dorsal-ventral patterning in the early Drosophila embryo
Q39548272Spatiotemporal transcription of the P element and the 412 retrotransposon during embryogenesis of Drosophila melanogaster and D. willistoni
Q57462271Species and cell-type properties of classically defined human and rodent neurons and glia
Q22065859Species-specific transcription in mice carrying human chromosome 21
Q61813761Standing genetic variation as the predominant source for adaptation of a songbird
Q38873256Stepwise modification of a modular enhancer underlies adaptation in a Drosophila population
Q74441685Stickleback is the catch of the day
Q30497836Structural shifts of aldehyde dehydrogenase enzymes were instrumental for the early evolution of retinoid-dependent axial patterning in metazoans
Q38883822Structure of the Transcriptional Regulatory Network Correlates with Regulatory Divergence in Drosophila
Q34241617Surprising flexibility in a conserved Hox transcription factor over 550 million years of evolution
Q34038754Synaptic scaffold evolution generated components of vertebrate cognitive complexity.
Q58756781Synthetic circuits reveal how mechanisms of gene regulatory networks constrain evolution
Q51944946Systematic human/zebrafish comparative identification of cis-regulatory activity around vertebrate developmental transcription factor genes.
Q64985798TFforge utilizes large-scale binding site divergence to identify transcriptional regulators involved in phenotypic differences.
Q91236146TTG1 proteins regulate circadian activity as well as epidermal cell fate and pigmentation
Q36801372Taking note of Tinbergen, or: the promise of a biology of behaviour
Q46280018Taxon-restricted genes at the origin of a novel trait allowing access to a new environment
Q34535938Tempo and mode of genome evolution in a 50,000-generation experiment
Q33564527Tempo and mode of regulatory evolution in Drosophila
Q37029584The Aging Epigenome
Q58571319The Ciona Myogenic Regulatory Factor Functions as a Typical MRF but Possesses a Novel N-terminus that is Essential for Activity
Q28652467The Comet Cometh: Evolving Developmental Systems
Q34428766The DMD locus harbours multiple long non-coding RNAs which orchestrate and control transcription of muscle dystrophin mRNA isoforms.
Q33363889The Deep Origin and Recent Loss of Venom Toxin Genes in Rattlesnakes
Q28608104The Evolution of Bony Vertebrate Enhancers at Odds with Their Coding Sequence Landscape
Q42174826The Expression of Petunia Strigolactone Pathway Genes is Altered as Part of the Endogenous Developmental Program.
Q33962366The Feasibility of Folk Science
Q36213375The Gene Regulatory Network of Lens Induction Is Wired through Meis-Dependent Shadow Enhancers of Pax6.
Q36867845The Genetic Basis of Baculum Size and Shape Variation in Mice
Q37212375The Genetic Basis of Pigmentation Differences Within and Between Drosophila Species
Q36067676The QTN program and the alleles that matter for evolution: all that's gold does not glitter
Q46284233The Role of Alternative Splicing and Differential Gene Expression in Cichlid Adaptive Radiation
Q28601461The Role of microRNAs in the Repeated Parallel Diversification of Lineages of Midas Cichlid Fish from Nicaragua
Q49409620The STENOFOLIA gene from Medicago alters leaf width, flowering time and chlorophyll content in transgenic wheat.
Q116202018The Tiger Rattlesnake genome reveals a complex genotype underlying a simple venom phenotype
Q46215237The analysis of Gene Regulatory Networks in plant evo-devo.
Q41006354The ancestral levels of transcription and the evolution of sexual phenotypes in filamentous fungi
Q30385188The appeasement of Doug: a synthetic approach to enhancer biology.
Q46939095The appositional articular morphology of the talo-crural joint: the influence of substrate use on joint shape
Q37477461The causes of repeated genetic evolution
Q37873983The central role of RNA in human development and cognition
Q41436579The developmental brain gene NPAS3 contains the largest number of accelerated regulatory sequences in the human genome
Q51887898The developmental role of Agouti in color pattern evolution.
Q47130566The emerging landscape of in vitro and in vivo epigenetic allelic effects.
Q34397460The evolution of cichlid fish egg-spots is linked with a cis-regulatory change
Q38661582The evolution of duplicate gene expression in mammalian organs
Q84414718The evolution of epitype
Q36043417The evolution of gene expression and the transcriptome-phenotype relationship.
Q42730189The evolution of gene regulation, the RNA universe, and the vexed questions of artefact and noise
Q33399421The evolution of hierarchical gene regulatory networks
Q57212298The evolution of molluscs
Q41998585The evolution of novel host use is unlikely to be constrained by trade-offs or a lack of genetic variation
Q38025117The evolution of novelty in conserved gene families
Q28727265The evolution of root hairs and rhizoids
Q28740902The evolution of syntax: an exaptationist perspective
Q33987571The evolutionary origin of epithelial cell-cell adhesion mechanisms
Q22122002The evolutionary origin of orphan genes
Q35250939The evolutionary origination and diversification of a dimorphic gene regulatory network through parallel innovations in cis and trans.
Q28654728The evolutionary origins and consequences of self-fertility in nematodes
Q21198722The extent of functionality in the human genome
Q33520200The eyes have it: regulatory and structural changes both underlie cichlid visual pigment diversity
Q28235419The first steps of adaptation of Escherichia coli to the gut are dominated by soft sweeps
Q38203851The fruit, the whole fruit, and everything about the fruit.
Q28542978The genetic and mechanistic basis for variation in gene regulation
Q39043827The genetic and molecular architecture of phenotypic diversity in sticklebacks.
Q34109030The genetic basis of evolutionary change in gene expression levels
Q38150710The genetic causes of convergent evolution
Q21092463The genetic signatures of noncoding RNAs
Q28650352The genetics of colony form and function in Caribbean Acropora corals
Q22122158The genomic basis of adaptive evolution in threespine sticklebacks
Q34342479The hourglass and the early conservation models--co-existing patterns of developmental constraints in vertebrates
Q44485583The inheritance of process: a dynamical systems approach
Q31112261The life aquatic: advances in marine vertebrate genomics
Q34310887The many faces of pleiotropy
Q37628813The nature and extent of mutational pleiotropy in gene expression of male Drosophila serrata.
Q46892523The ontogeny of talo-crural appositional articular morphology among catarrhine taxa: adult shape reflects substrate use.
Q50459532The origins of developmental gene regulation.
Q37612743The predictability of molecular evolution during functional innovation.
Q58044024The proteomics of feather development in pied flycatchers (Ficedula hypoleuca) with different plumage coloration
Q33489514The random nature of genome architecture: predicting open reading frame distributions
Q37002213The regulation and evolution of a genetic switch controlling sexually dimorphic traits in Drosophila
Q46056018The rewiring of transcription circuits in evolution.
Q22121998The rise of regulatory RNA
Q35400045The role of cis regulatory evolution in maize domestication.
Q46905151The role of self-organization in developmental evolution
Q27022344The role of transposable elements in health and diseases of the central nervous system
Q37837472The sociobiology of molecular systems.
Q37136931The spatiotemporal order of signaling events unveils the logic of development signaling
Q53007409The topology of evolutionary novelty and innovation in macroevolution.
Q36576404The transcriptomic basis of tissue- and nutrition-dependent sexual dimorphism in the beetle Onthophagus taurus
Q34539751The underlying molecular and network level mechanisms in the evolution of robustness in gene regulatory networks
Q36837290Theria-specific homeodomain and cis-regulatory element evolution of the Dlx3-4 bigene cluster in 12 different mammalian species
Q41852131Things change: how comparative transcriptomics suggest the pallium has evolved at multiple levels of organization.
Q39157796Topologically associated domains: a successful scaffold for the evolution of gene regulation in animals.
Q37986637Toward new Drosophila paradigms.
Q38570600Toward understanding the evolution of vertebrate gene regulatory networks: comparative genomics and epigenomic approaches
Q33939811Towards an evolutionary model of transcription networks
Q57784024Towards reconstructing the ancestral brain gene-network regulating caste differentiation in ants
Q28603691Tracking the origins of Yakutian horses and the genetic basis for their fast adaptation to subarctic environments
Q37112455Transcription factor function and promoter architecture govern the evolution of bacterial regulons
Q41901525Transcriptional enhancers in development and disease
Q38194866Transcriptional enhancers: from properties to genome-wide predictions
Q28728682Transcriptional network structure has little effect on the rate of regulatory evolution in yeast
Q34322301Transcriptome analysis reveals novel patterning and pigmentation genes underlying Heliconius butterfly wing pattern variation.
Q37054369Transcriptome comparison reveals a genetic network regulating the lower temperature limit in fish
Q46253915Transcriptome sequencing reveals high isoform diversity in the ant Formica exsecta
Q92133086Transcriptome-Wide Association Supplements Genome-Wide Association in Zea mays
Q36125592Transcriptomic analyses of regenerating adult feathers in chicken
Q48296286Transforming a transcription factor
Q34748732Transposable elements modulate human RNA abundance and splicing via specific RNA-protein interactions
Q28661923Transposable elements: powerful contributors to angiosperm evolution and diversity
Q34456484Transpositional shuffling and quality control in male germ cells to enhance evolution of complex organisms
Q42772867Transposon-mediated rewiring of gene regulatory networks contributed to the evolution of pregnancy in mammals.
Q92146696Turing-like mechanism in a stochastic reaction-diffusion model recreates three dimensional vascular patterning of plant stems
Q47674677Two Drosophilids exhibit distinct EGF pathway patterns in oogenesis.
Q34652035Two developmental modules establish 3D beak-shape variation in Darwin's finches
Q48314118Two genetic changes in cis-regulatory elements caused evolution of petal spot position in Clarkia.
Q37663820Two genomic regions together cause dark abdominal pigmentation in Drosophila tenebrosa
Q98196815Two sets of candidate crustacean wing homologues and their implication for the origin of insect wings
Q58568457UV-Protection Timer Controls Linkage between Stress and Pigmentation Skin Protection Systems
Q93019818Uncovering a mitochondrial unfolded protein response in corals and its role in adapting to a changing world
Q38527306Using transgenic reporter assays to functionally characterize enhancers in animals
Q36598154Variation and constraint in Hox gene evolution
Q28267001Was the evolutionary road towards adaptive immunity paved with endothelium?
Q49009715What history tells us XVIII. When functional biologists propose mechanisms of evolution.
Q27022909What history tells us XXXV. Enhancers: their existence and characteristics have raised puzzling issues since their discovery
Q50554164What is "homology thinking" and what is it for?
Q28608344When Ontogeny Matters: A New Japanese Species of Brittle Star Illustrates the Importance of Considering both Adult and Juvenile Characters in Taxonomic Practice
Q37155988When to rely on maternal effects and when on phenotypic plasticity?
Q26739674Whither life? Conjectures on the future evolution of biochemistry
Q55514944Why does the magnitude of genotype‐by‐environment interaction vary?
Q30993138Widespread and Adaptive Alterations in Genome-Wide Gene Expression Associated with Ecological Divergence of Two Oryza Species
Q41962988ZBED6: The birth of a new transcription factor in the common ancestor of placental mammals
Q50093181[Pangenesis, genes, epigenesis].
Q52783995[The genetic walk of evolution].
Q41229813cis-Regulatory remodeling of the SCL locus during vertebrate evolution.
Q36967806cis-regulatory change associated with snake body plan evolution
Q37960397ftz evolution: findings, hypotheses and speculations (response to DOI 10.1002/bies.201100019).
Q33362755miR2118-triggered phased siRNAs are differentially expressed during the panicle development of wild and domesticated African rice species

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