Contribution of trans regulatory eQTL to cryptic genetic variation in C. elegans.

scientific article

Contribution of trans regulatory eQTL to cryptic genetic variation in C. elegans. is …
instance of (P31):
scholarly articleQ13442814

External links are
P6179Dimensions Publication ID1090298381
P356DOI10.1186/S12864-017-3899-8
P932PMC publication ID5492678
P698PubMed publication ID28662696

P50authorBasten SnoekQ42616823
Andrew R. CossinsQ50421298
Mark G. SterkenQ55188426
Jan E KammengaQ87718365
P2093author name stringRachel Brenchley
Rita J M Volkers
Joost A G Riksen
Arjen Van't Hof
Roel P J Bevers
P2860cites workThe genetics of Caenorhabditis elegansQ24533408
KEGG: Kyoto Encyclopedia of Genes and GenomesQ24548371
Role of pleiotropy in the evolution of a cryptic developmental variation in Caenorhabditis elegansQ27320539
Identification of a tissue-selective heat shock response regulatory networkQ27322992
Ubiquitin-mediated response to microsporidia and virus infection in C. elegansQ27324783
Normalization of cDNA microarray dataQ28181692
Integrative analysis of the Caenorhabditis elegans genome by the modENCODE projectQ28301622
Genetic and environmental factors affecting cryptic variations in gene regulatory networksQ28681527
The control of the false discovery rate in multiple testing under dependencyQ29032132
Genetic dissection of transcriptional regulation in budding yeastQ29618883
Pre-processing Agilent microarray dataQ31111050
Genetical Genomics Reveals Large Scale Genotype-By-Environment Interactions in Arabidopsis thalianaQ42626252
The effects of genetic variation on gene expression dynamics during developmentQ43480568
Regulatory network identification by genetical genomics: signaling downstream of the Arabidopsis receptor-like kinase ERECTA.Q44852095
Cryptic genetic variation in natural populations: a predictive frameworkQ46877223
Extensive oscillatory gene expression during C. elegans larval development.Q50695104
Genetical genomics: the added value from segregation.Q52133626
Trans-acting regulatory variation in Saccharomyces cerevisiae and the role of transcription factorsQ73747425
Environmental influence on the genetic correlations between life-history traits in Caenorhabditis elegansQ79487708
Microarray analysis of gene expression with age in individual nematodesQ80110225
Mapping phenotypic plasticity and genotype-environment interactions affecting life-history traits in Caenorhabditis elegansQ80217904
Genetic variation for stress-response hormesis in C. elegans lifespanQ84185490
Mapping determinants of gene expression plasticity by genetical genomics in C. elegansQ33267908
A Caenorhabditis elegans wild type defies the temperature-size rule owing to a single nucleotide polymorphism in tra-3.Q33276638
Sequence polymorphisms cause many false cis eQTLsQ33291114
Gene-environment interaction in yeast gene expressionQ33328631
Comparative developmental expression profiling of two C. elegans isolatesQ33396644
Recombinational landscape and population genomics of Caenorhabditis elegansQ33417666
Gene expression modifications by temperature-toxicants interactions in Caenorhabditis elegansQ34023900
Global genetic robustness of the alternative splicing machinery in Caenorhabditis elegansQ34131586
Patterns of cis regulatory variation in diverse human populationsQ34244935
Dampening of expression oscillations by synchronous regulation of a microRNA and its targetQ34371199
WormBase 2014: new views of curated biologyQ34382790
Allelic mapping bias in RNA-sequencing is not a major confounder in eQTL studiesQ34416687
Genome-wide gene expression regulation as a function of genotype and age in C. elegans.Q34619782
Diverse transcription factor binding features revealed by genome-wide ChIP-seq in C. elegansQ34625961
The million mutation project: a new approach to genetics in Caenorhabditis elegansQ34783904
Gene-environment and protein-degradation signatures characterize genomic and phenotypic diversity in wild Caenorhabditis elegans populationsQ34956179
Heat avoidance is regulated by transient receptor potential (TRP) channels and a neuropeptide signaling pathway in Caenorhabditis elegansQ35060018
A variant in the neuropeptide receptor npr-1 is a major determinant of Caenorhabditis elegans growth and physiologyQ35105735
Regulatory network construction in Arabidopsis by using genome-wide gene expression quantitative trait loci.Q35616354
Global eQTL mapping reveals the complex genetic architecture of transcript-level variation in ArabidopsisQ35730032
Remarkably Divergent Regions Punctuate the Genome Assembly of the Caenorhabditis elegans Hawaiian Strain CB4856.Q35882390
Contrasting invertebrate immune defense behaviors caused by a single gene, the Caenorhabditis elegans neuropeptide receptor gene npr-1Q35986214
The genome-wide role of HSF-1 in the regulation of gene expression in Caenorhabditis elegansQ36096537
More than the sum of its parts: a complex epistatic network underlies natural variation in thermal preference behavior in Caenorhabditis elegansQ36439857
Cryptic genetic variation: evolution's hidden substrateQ36534143
Multiple reference genomes and transcriptomes for Arabidopsis thalianaQ36868961
Mapping cis- and trans-regulatory effects across multiple tissues in twinsQ37200482
Generalizing genetical genomics: getting added value from environmental perturbationQ37261761
The genomic determinants of genotype × environment interactions in gene expressionQ38114624
Identification of a novel cis-regulatory element involved in the heat shock response in Caenorhabditis elegans using microarray gene expression and computational methodsQ38289471
The laboratory domestication of Caenorhabditis elegans.Q38389240
A rapid and massive gene expression shift marking adolescent transition in C. elegansQ38418687
Selection at Linked Sites Shapes Heritable Phenotypic Variation in C. elegansQ42257621
Correlating gene expression variation with cis-regulatory polymorphism in Saccharomyces cerevisiaeQ42410972
PQM-1 complements DAF-16 as a key transcriptional regulator of DAF-2-mediated development and longevityQ42585902
P4510describes a project that useslimmaQ112236343
P433issue1
P407language of work or nameEnglishQ1860
P921main subjectCaenorhabditis elegansQ91703
genetic variationQ349856
P304page(s)500
P577publication date2017-06-29
P1433published inBMC GenomicsQ15765854
P1476titleContribution of trans regulatory eQTL to cryptic genetic variation in C. elegans
P478volume18

Reverse relations

cites work (P2860)
Q92977363A Cell Fate Switch in the Caenorhabditis elegans Seam Cell Lineage Occurs Through Modulation of the Wnt Asymmetry Pathway in Response to Temperature Increase
Q64100922A multi-parent recombinant inbred line population of C. elegans allows identification of novel QTLs for complex life history traits
Q47135629Construction of a High-Density Genetic Map from RNA-Seq Data for an Arabidopsis Bay-0 × Shahdara RIL Population.
Q64068812Genetic background modifies phenotypic and transcriptional responses in a C. elegans model of α-synuclein toxicity
Q58776580Natural genetic variation in identified genomic loci controlling metabolite levels
Q41383342Ras/MAPK Modifier Loci Revealed by eQTL in Caenorhabditis elegans
Q47108673Temporal dynamics of gene expression in heat-stressed Caenorhabditis elegans.
Q89505497Tensor decomposition of stimulated monocyte and macrophage gene expression profiles identifies neurodegenerative disease-specific trans-eQTLs
Q88431355The Evolution of Gene Expression in cis and trans
Q90862478Tightly linked antagonistic-effect loci underlie polygenic phenotypic variation in C. elegans
Q91851115Transcriptome resilience predicts thermotolerance in Caenorhabditis elegans
Q92794696WormQTL2: an interactive platform for systems genetics in Caenorhabditis elegans

Search more.