A dual role for substrate S-adenosyl-L-methionine in the methylation reaction with bacteriophage T4 Dam DNA-[N6-adenine]-methyltransferase

scientific article

A dual role for substrate S-adenosyl-L-methionine in the methylation reaction with bacteriophage T4 Dam DNA-[N6-adenine]-methyltransferase is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1093/NAR/29.11.2361
P932PMC publication ID55703
P698PubMed publication ID11376154
P5875ResearchGate publication ID275143079

P2093author name stringE G Malygin
N O Reich
S Hattman
S L Schlagman
W M Lindstrom
L G Ovechkina
A A Evdokimov
V V Zinoviev
P2860cites work2-Aminopurine as a fluorescent probe for DNA base flipping by methyltransferasesQ24546328
Three-dimensional structure of the adenine-specific DNA methyltransferase M.Taq I in complex with the cofactor S-adenosylmethionineQ24562671
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye bindingQ25938984
Structure of RsrI methyltransferase, a member of the N6-adenine beta class of DNA methyltransferasesQ27627400
Functional roles of the conserved threonine 250 in the target recognition domain of HhaI DNA methyltransferaseQ27628771
Structure of the N6-adenine DNA methyltransferase M.TaqI in complex with DNA and a cofactor analogQ27629529
The crystal structure of Haelll methyltransferase covalently complexed to DNA: An extrahelical cytosine and rearranged base pairingQ27729758
HhaI methyltransferase flips its target base out of the DNA helixQ27731553
Crystal structure of the HhaI DNA methyltransferase complexed with S-adenosyl-L-methionineQ27731970
A structural basis for the preferential binding of hemimethylated DNA by HhaI DNA methyltransferaseQ27733930
Structure of pvu II DNA-(cytosine N4) methyltransferase, an example of domain permutation and protein fold assignmentQ27739964
DNA containing 4'-thio-2'-deoxycytidine inhibits methylation by HhaI methyltransferaseQ27739981
Structures of HhaI methyltransferase complexed with substrates containing mismatches at the target baseQ27765722
Crystal structure of the DpnM DNA adenine methyltransferase from the DpnII restriction system of streptococcus pneumoniae bound to S-adenosylmethionineQ27766381
Mechanism of inhibition of DNA (cytosine C5)-methyltransferases by oligodeoxyribonucleotides containing 5,6-dihydro-5-azacytosineQ27766756
Calculation of protein extinction coefficients from amino acid sequence dataQ27861073
Pre-steady state kinetics of bacteriophage T4 dam DNA-[N(6)-adenine] methyltransferase: interaction with native (GATC) or modified sitesQ33826044
Interaction of the phage T4 Dam DNA-[N6-adenine] methyltransferase with oligonucleotides containing native or modified (defective) recognition sitesQ34641294
HhaI and HpaII DNA methyltransferases bind DNA mismatches, methylate uracil and block DNA repairQ34746885
Sequence-Specific Binding of DNA by the EcoRV Restriction and Modification Enzymes with Nucleic Acid and Cofactor AnalogsQ38292360
Reconciling structure and function in HhaI DNA cytosine-C-5 methyltransferaseQ38315517
Sequence-specific DNA binding by the MspI DNA methyltransferaseQ38328077
Effect of base analog substitutions in the specific GATC site on binding and methylation of oligonucleotide duplexes by the bacteriophage T4 Dam DNA-[N6-adenine] methyltransferaseQ38328777
Mutational analysis of target base flipping by the EcoRV adenine-N6 DNA methyltransferaseQ38329103
Direct real time observation of base flipping by the EcoRI DNA methyltransferaseQ38340696
Dam methyltransferase from Escherichia coli: kinetic studies using modified DNA oligomers: nonmethylated substratesQ38346263
Substrate binding in vitro and kinetics of RsrI [N6-adenine] DNA methyltransferaseQ39584589
Chemical display of thymine residues flipped out by DNA methyltransferasesQ39724595
Structure and Function of DNA MethyltransferasesQ40475987
The double role of methyl donor and allosteric effector of S-adenosyl-methionine for Dam methylase of E. coliQ40518903
The DNA binding domain of the rat liver nuclear protein C/EBP is bipartiteQ41260447
Targeted base stacking disruption by the EcoRI DNA methyltransferaseQ46567946
LAC9 DNA-binding domain coordinates two zinc atoms per monomer and contacts DNA as a dimer.Q54710134
Crystal structure of the HhaI DNA methyltransferaseQ56256602
Kinetic and catalytic mechanism of HhaI methyltransferaseQ68962623
Molecular cloning of a functional dam+ gene coding for phage T4 DNA adenine methylaseQ70153563
Phage T4 DNA [N6-adenine]methyltransferase. Overexpression, purification, and characterizationQ72315754
Functional roles of the conserved aromatic amino acid residues at position 108 (motif IV) and position 196 (motif VIII) in base flipping and catalysis by the N6-adenine DNA methyltransferase from Thermus aquaticusQ77945248
P433issue11
P407language of work or nameEnglishQ1860
P921main subjectbacteriophageQ165028
P304page(s)2361-2369
P577publication date2001-06-01
P1433published inNucleic Acids ResearchQ135122
P1476titleA dual role for substrate S-adenosyl-L-methionine in the methylation reaction with bacteriophage T4 Dam DNA-[N6-adenine]-methyltransferase
P478volume29

Reverse relations

cites work (P2860)
Q35805058Bacteriophage T2Dam and T4Dam DNA-[N6-adenine]-methyltransferases
Q44261818Bacteriophage T4 Dam DNA-(N6-adenine)-methyltransferase. Processivity and orientation to the methylation target
Q38295204Bacteriophage T4 Dam DNA-[N6-adenine]methyltransferase. Kinetic evidence for a catalytically essential conformational change in the ternary complex
Q44534317Bacteriophage T4Dam (DNA-(adenine-N6)-methyltransferase): evidence for two distinct stages of methylation under single turnover conditions
Q45064162Bacteriophage T4Dam DNA-(adenine-N(6))-methyltransferase. Comparison of pre-steady state and single turnover methylation of 40-mer duplexes containing two (un)modified target sites.
Q34587622Beyond Watson and Crick: DNA methylation and molecular enzymology of DNA methyltransferases
Q43151623Characterization of an N6 adenine methyltransferase from Helicobacter pylori strain 26695 which methylates adjacent adenines on the same strand.
Q44323352DNA (cytosine-N4-)- and -(adenine-N6-)-methyltransferases have different kinetic mechanisms but the same reaction route. A comparison of M.BamHI and T4 Dam.
Q36868466DNA base flipping by both members of the PspGI restriction-modification system
Q46920010Differential methylation kinetics of individual target site strands by T4Dam DNA methyltransferase
Q37488236Dimeric/oligomeric DNA methyltransferases: an unfinished story
Q25257375Dimerization of the bacterial RsrI N6-adenine DNA methyltransferase
Q37698622Diversity of DNA methyltransferases that recognize asymmetric target sequences
Q24669987Epigenetic gene regulation in the bacterial world
Q38300220Nucleotide flipping by restriction enzymes analyzed by 2-aminopurine steady-state fluorescence
Q41429898Organization of the BcgI restriction-modification protein for the transfer of one methyl group to DNA.
Q27641896Structure of the bacteriophage T4 DNA adenine methyltransferase
Q36598928Structure, function and mechanism of exocyclic DNA methyltransferases
Q33290797Study of bacteriophage T4-encoded Dam DNA (adenine-N6)-methyltransferase binding with substrates by rapid laser UV cross-linking.
Q37346268Symmetry elements in DNA structure important for recognition/methylation by DNA [amino]-methyltransferases
Q35001867Time-resolved fluorescence studies of nucleotide flipping by restriction enzymes.

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