scholarly article | Q13442814 |
P356 | DOI | 10.1128/MCB.21.2.380-389.2001 |
P8608 | Fatcat ID | release_zkix5wn7v5fztp2ge6eu66tosy |
P932 | PMC publication ID | 86576 |
P698 | PubMed publication ID | 11134327 |
P50 | author | Achim Schnaufer | Q60733674 |
P2093 | author name string | R Aebersold | |
S P Gygi | |||
R P Igo | |||
K D Stuart | |||
R Salavati | |||
A K Panigrahi | |||
S S Palazzo | |||
D S Weston | |||
N Carmean | |||
N L Ernst | |||
P2860 | cites work | Direct visualization of uridylate deletion in vitro suggests a mechanism for kinetoplastid RNA editing | Q71000760 |
Mining genomes: correlating tandem mass spectra of modified and unmodified peptides to sequences in nucleotide databases | Q71208651 | ||
RNA ligase and its involvement in guide RNA/mRNA chimera formation. Evidence for a cleavage-ligation mechanism of Trypanosoma brucei mRNA editing | Q71686585 | ||
Mass Spectrometric Sequencing of Proteins from Silver-Stained Polyacrylamide Gels | Q27860531 | ||
Identification of the proteins of the yeast U1 small nuclear ribonucleoprotein complex by mass spectrometry | Q27930452 | ||
Correlation between protein and mRNA abundance in yeast | Q28137554 | ||
RNA editing: getting U into RNA | Q28239897 | ||
A model for RNA editing in kinetoplastid mitochondria: "guide" RNA molecules transcribed from maxicircle DNA provide the edited information | Q28255689 | ||
Mitochondrial glutamate dehydrogenase from Leishmania tarentolae is a guide RNA-binding protein | Q28776780 | ||
Direct analysis of protein complexes using mass spectrometry | Q29617450 | ||
Association of guide RNA binding protein gBP21 with active RNA editing complexes in Trypanosoma brucei | Q33780973 | ||
Uridine insertion/deletion RNA editing in trypanosome mitochondria--a review | Q33783772 | ||
Kinetoplastid RNA-editing-associated protein 1 (REAP-1): a novel editing complex protein with repetitive domains. | Q33889874 | ||
Leishmania major Friedlin chromosome 1 has an unusual distribution of protein-coding genes | Q35062825 | ||
RNA editing in kinetoplastid protozoa | Q36574222 | ||
Assembly of mitochondrial ribonucleoprotein complexes involves specific guide RNA (gRNA)-binding proteins and gRNA domains but does not require preedited mRNA. | Q36650706 | ||
Uridylate addition and RNA ligation contribute to the specificity of kinetoplastid insertion RNA editing | Q39540061 | ||
The involvement of gRNA-binding protein gBP21 in RNA editing-an in vitro and in vivo analysis | Q39727472 | ||
Complexes from Trypanosoma brucei that exhibit deletion editing and other editing-associated properties | Q40018473 | ||
Disruption of a gene encoding a novel mitochondrial DEAD-box protein in Trypanosoma brucei affects edited mRNAs | Q40023139 | ||
Specific cleavage of pre-edited mRNAs in trypanosome mitochondrial extracts | Q40655025 | ||
Native mRNA editing complexes from Trypanosoma brucei mitochondria | Q41545292 | ||
Translation of the edited mRNA for cytochrome b in trypanosome mitochondria | Q41722608 | ||
Trypanosoma brucei RBP16 is a mitochondrial Y-box family protein with guide RNA binding activity | Q42599523 | ||
Purification of a functional enzymatic editing complex from Trypanosoma brucei mitochondria | Q42623988 | ||
Trypanosoma brucei gBP21. An arginine-rich mitochondrial protein that binds to guide RNA with high affinity | Q42648911 | ||
Addition of uridines to edited RNAs in trypanosome mitochondria occurs independently of transcription | Q45346139 | ||
The IsTaR 1 serodeme of Trypanosoma brucei: development of a new serodeme. | Q46697549 | ||
Trypanosoma brucei TBRGG1, a mitochondrial oligo(U)-binding protein that co-localizes with an in vitro RNA editing activity | Q47682066 | ||
Knockout of the glutamate dehydrogenase gene in bloodstream Trypanosoma brucei in culture has no effect on editing of mitochondrial mRNAs | Q47954472 | ||
RNA editing: a mechanism for gRNA-specified uridylate insertion into precursor mRNA. | Q54649086 | ||
P4510 | describes a project that uses | ImageQuant | Q112270642 |
P433 | issue | 2 | |
P407 | language of work or name | English | Q1860 |
P921 | main subject | Trypanosoma brucei | Q33244 |
KREL1 | Q62416978 | ||
KREL1 | Q62449553 | ||
mitochondrial RNA editing ligase 1 | Q61485321 | ||
KREL2 | Q61487223 | ||
RNA-editing ligase 1, mitochondrial | Q61548867 | ||
mitochondrial RNA editing ligase 1 | Q61921480 | ||
REL2 | Q62142456 | ||
mitochondrial RNA editing ligase 1 | Q62158963 | ||
REL2 | Q62169422 | ||
KREL1 | Q62223413 | ||
KREL1 | Q62224760 | ||
P304 | page(s) | 380-389 | |
P577 | publication date | 2001-01-01 | |
P1433 | published in | Molecular and Cellular Biology | Q3319478 |
P1476 | title | Association of two novel proteins, TbMP52 and TbMP48, with the Trypanosoma brucei RNA editing complex | |
P478 | volume | 21 |
Q41944052 | A 100-kD complex of two RNA-binding proteins from mitochondria of Leishmania tarentolae catalyzes RNA annealing and interacts with several RNA editing components |
Q33797941 | A Computational Methodology to Overcome the Challenges Associated With the Search for Specific Enzyme Targets to Develop Drugs Against Leishmania major. |
Q42694023 | A eukaryotic type serine/threonine kinase and phosphatase in Streptococcus agalactiae reversibly phosphorylate an inorganic pyrophosphatase and affect growth, cell segregation, and virulence |
Q34364399 | A hammerhead ribozyme substrate and reporter for in vitro kinetoplastid RNA editing |
Q33648319 | A protein-protein interaction map of trypanosome ~20S editosomes. |
Q46329522 | A putative novel nuclear-encoded subunit of the cytochrome c oxidase complex in trypanosomatids |
Q58855991 | After the genome—where next? |
Q33495474 | An electrochemiluminescent aptamer switch for a high-throughput assay of an RNA editing reaction |
Q34133273 | An essential RNase III insertion editing endonuclease in Trypanosoma brucei. |
Q42851304 | An essential role of KREPB4 in RNA editing and structural integrity of the editosome in Trypanosoma brucei. |
Q34642068 | Analysis of protein complexes using mass spectrometry |
Q34278417 | Assembly and function of the RNA editing complex in Trypanosoma brucei requires band III protein |
Q33940631 | Cloning and characterization of two guide RNA-binding proteins from mitochondria of Crithidia fasciculata: gBP27, a novel protein, and gBP29, the orthologue of Trypanosoma brucei gBP21 |
Q35212972 | Composition of the editing complex of Trypanosoma brucei |
Q42040628 | Compositionally and functionally distinct editosomes in Trypanosoma brucei |
Q27675299 | Crystal structure of a heterodimer of editosome interaction proteins in complex with two copies of a cross-reacting nanobody |
Q36139872 | Differential Editosome Protein Function between Life Cycle Stages of Trypanosoma brucei |
Q37168963 | Differential functions of two editosome exoUases in Trypanosoma brucei. |
Q74292694 | Direct visualisation of RNA editing within a Leishmania tarentolae mitochondrial extract |
Q52552449 | Disruption of the zinc finger motifs in the Leishmania tarentolae LC-4 (=TbMP63) L-complex editing protein affects the stability of the L-complex. |
Q39674967 | Distinct functions of two RNA ligases in active Trypanosoma brucei RNA editing complexes. |
Q39774520 | Dyskinetoplastic Trypanosoma brucei contains functional editing complexes |
Q34574307 | Editing machines: the complexities of trypanosome RNA editing |
Q36156151 | Editosome accessory factors KREPB9 and KREPB10 in Trypanosoma brucei |
Q35010902 | Endonuclease associations with three distinct editosomes in Trypanosoma brucei |
Q34012441 | Four related proteins of the Trypanosoma brucei RNA editing complex. |
Q33935232 | Functional complementation of Trypanosoma brucei RNA in vitro editing with recombinant RNA ligase |
Q36234306 | Identification by Random Mutagenesis of Functional Domains in KREPB5 That Differentially Affect RNA Editing between Life Cycle Stages of Trypanosoma brucei |
Q41827505 | Identification of novel components of Trypanosoma brucei editosomes |
Q41335243 | Identification of specific inhibitors for a trypanosomatid RNA editing reaction |
Q42124628 | In Trypanosoma brucei RNA editing, TbMP18 (band VII) is critical for editosome integrity and for both insertional and deletional cleavages. |
Q40446650 | In Trypanosoma brucei RNA editing, band II enables recognition specifically at each step of the U insertion cycle |
Q33635964 | In vivo cleavage specificity of Trypanosoma brucei editosome endonucleases. |
Q37390528 | Inhibitors of RNA editing as potential chemotherapeutics against trypanosomatid pathogens |
Q41876511 | Interactions of mRNAs and gRNAs involved in trypanosome mitochondrial RNA editing: structure probing of a gRNA bound to its cognate mRNA. |
Q34364107 | Interactions of mRNAs and gRNAs involved in trypanosome mitochondrial RNA editing: structure probing of an mRNA bound to its cognate gRNA. |
Q44441848 | Is the Trypanosoma brucei REL1 RNA ligase specific for U-deletion RNA editing, and is the REL2 RNA ligase specific for U-insertion editing? |
Q64462850 | Isolation and Compositional Analysis of Trypanosomatid Editosomes |
Q34582995 | Isolation of a U-insertion/deletion editing complex from Leishmania tarentolae mitochondria |
Q42250864 | KREPA4, an RNA binding protein essential for editosome integrity and survival of Trypanosoma brucei |
Q36400713 | KREPA6 is an RNA-binding protein essential for editosome integrity and survival of Trypanosoma brucei |
Q35691203 | KREPB6, KREPB7, and KREPB8 are important for editing endonuclease function in Trypanosoma brucei. |
Q34206225 | KREX2 is not essential for either procyclic or bloodstream form Trypanosoma brucei. |
Q39887972 | Kinetoplastid RNA editing involves a 3' nucleotidyl phosphatase activity |
Q44620432 | Kinetoplastid RNA editing ligases 1 and 2 exhibit different electrostatic properties |
Q73208318 | Kinetoplastid RNA editing ligases: complex association, characterization, and substrate requirements |
Q44499264 | Mass spectrometric analysis of the editosome and other multiprotein complexes in Trypanosoma brucei. |
Q40036643 | Mitochondrial complexes in Trypanosoma brucei: a novel complex and a unique oxidoreductase complex |
Q34365521 | Mitochondrial proteins and complexes in Leishmania and Trypanosoma involved in U-insertion/deletion RNA editing |
Q36246636 | Mutational analysis of Trypanosoma brucei editosome proteins KREPB4 and KREPB5 reveals domains critical for function. |
Q34800149 | Naphthalene-based RNA editing inhibitor blocks RNA editing activities and editosome assembly in Trypanosoma brucei |
Q42254260 | RBP16 is a multifunctional gene regulatory protein involved in editing and stabilization of specific mitochondrial mRNAs in Trypanosoma brucei |
Q34702837 | RNA editing complex interactions with a site for full-round U deletion in Trypanosoma brucei |
Q41866692 | RNA editing in Trypanosoma brucei requires three different editosomes |
Q73835319 | RNA editing-associated protein 1 is an RNA binding protein with specificity for preedited mRNA |
Q28610127 | RNA editing: complexity and complications |
Q38335032 | RNA interference analyses suggest a transcript-specific regulatory role for mitochondrial RNA-binding proteins MRP1 and MRP2 in RNA editing and other RNA processing in Trypanosoma brucei |
Q39677689 | RNA sequence and base pairing effects on insertion editing in Trypanosoma brucei |
Q49168726 | RNase III Domain of KREPB9 and KREPB10 Association with Editosomes in Trypanosoma brucei |
Q35012171 | Rewriting the information in DNA: RNA editing in kinetoplastids and myxomycetes |
Q39618738 | Role of uridylate-specific exoribonuclease activity in Trypanosoma brucei RNA editing |
Q28348370 | Roles for ligases in the RNA editing complex of Trypanosoma brucei: band IV is needed for U-deletion and RNA repair. |
Q44612182 | Separate insertion and deletion subcomplexes of the Trypanosoma brucei RNA editing complex. |
Q34365061 | Sequence and structural requirements for optimal guide RNA-directed insertional editing within Leishmania tarentolae |
Q43149089 | Snapshots of the RNA editing machine in trypanosomes captured at different assembly stages in vivo |
Q33285050 | Structural asymmetry and discrete nucleic acid subdomains in the Trypanosoma brucei kinetoplast |
Q43192506 | Structural basis for UTP specificity of RNA editing TUTases from Trypanosoma brucei |
Q27660537 | Structure of the T. brucei p22 protein, a cytochrome oxidase subunit II (COII) specific RNA editing accessory factor |
Q27665314 | Structures of a key interaction protein from the Trypanosoma brucei editosome in complex with single domain antibodies |
Q53583889 | Substrate determinants for RNA editing and editing complex interactions at a site for full-round U insertion. |
Q43226651 | T. brucei RNA editing: action of the U-insertional TUTase within a U-deletion cycle. |
Q37579589 | TbDSS-1, an essential Trypanosoma brucei exoribonuclease homolog that has pleiotropic effects on mitochondrial RNA metabolism |
Q38289525 | TbMP42 is a structure-sensitive ribonuclease that likely follows a metal ion catalysis mechanism |
Q35095914 | TbMP44 is essential for RNA editing and structural integrity of the editosome in Trypanosoma brucei |
Q44487520 | TbMP57 is a 3' terminal uridylyl transferase (TUTase) of the Trypanosoma brucei editosome |
Q39647029 | TbMP81 is required for RNA editing in Trypanosoma brucei |
Q36575689 | TbRGG1, an essential protein involved in kinetoplastid RNA metabolism that is associated with a novel multiprotein complex. |
Q34366165 | The 3'-untranslated region of cytochrome oxidase II mRNA functions in RNA editing of African trypanosomes exclusively as a cis guide RNA. |
Q37369418 | The Architecture of Trypanosoma brucei editosomes. |
Q41764960 | The MRB1 complex functions in kinetoplastid RNA processing. |
Q40096232 | The essential functions of KREPB4 are developmentally distinct and required for endonuclease association with editosomes |
Q28344644 | The specificity of nucleotide removal during RNA editing in Trypanosoma brucei |
Q27678926 | The structure of the C-terminal domain of the largest editosome interaction protein and its role in promoting RNA binding by RNA-editing ligase L2 |
Q39516191 | The trypanosome homolog of human p32 interacts with RBP16 and stimulates its gRNA binding activity |
Q37118434 | Toward understanding the conformational dynamics of RNA ligation |
Q39940448 | Trypanosoma brucei RNA editing complex: band II is structurally critical and maintains band V ligase, which is nonessential |
Q38569224 | Trypanosoma brucei RNA editing protein TbMP42 (band VI) is crucial for the endonucleolytic cleavages but not the subsequent steps of U-deletion and U-insertion. |
Q24610301 | Trypanosome REH1 is an RNA helicase involved with the 3'-5' polarity of multiple gRNA-guided uridine insertion/deletion RNA editing |
Q46840499 | Trypanosome mitochondrial 3' terminal uridylyl transferase (TUTase): the key enzyme in U-insertion/deletion RNA editing |
Q35976801 | Two distinct roles for terminal uridylyl transferases in RNA editing |
Q36535105 | U-Insertion/Deletion mRNA-Editing Holoenzyme: Definition in Sight |
Q36351318 | U-insertion/deletion RNA editing multiprotein complexes and mitochondrial ribosomes in Leishmania tarentolae are located in antipodal nodes adjacent to the kinetoplast DNA. |
Q36282126 | Unexplained complexity of the mitochondrial genome and transcriptome in kinetoplastid flagellates |
Q34397862 | Unique aspects of mitochondrial biogenesis in trypanosomatids |
Q37246104 | Uridine insertion/deletion RNA editing in trypanosomatid mitochondria: In search of the editosome |
Q35068202 | Uridine insertion/deletion RNA editing in trypanosome mitochondria: a complex business |
Q35158070 | Uridine insertion/deletion editing in trypanosomes: a playground for RNA-guided information transfer |
Q38569122 | gRNA/pre-mRNA annealing and RNA chaperone activities of RBP16. |
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