| scholarly article | Q13442814 |
| P2093 | author name string | Larry Simpson | |
| Arnold M Falick | |||
| Inna Aphasizheva | |||
| Ruslan Aphasizhev | |||
| Sandro Sbicego | |||
| Guanghan Gao | |||
| Xuedong Kang | |||
| Robert E Nelson | |||
| Agda M Simpson | |||
| P2860 | cites work | A generic protein purification method for protein complex characterization and proteome exploration | Q27861087 |
| The tandem affinity purification (TAP) method: a general procedure of protein complex purification | Q28131621 | ||
| A model for RNA editing in kinetoplastid mitochondria: "guide" RNA molecules transcribed from maxicircle DNA provide the edited information | Q28255689 | ||
| Roles for ligases in the RNA editing complex of Trypanosoma brucei: band IV is needed for U-deletion and RNA repair. | Q28348370 | ||
| Annealing of RNA editing substrates facilitated by guide RNA-binding protein gBP21 | Q28360230 | ||
| Association of guide RNA binding protein gBP21 with active RNA editing complexes in Trypanosoma brucei | Q33780973 | ||
| Uridine insertion/deletion RNA editing in trypanosome mitochondria--a review | Q33783772 | ||
| Development of a stable Leishmania expression vector and application to the study of parasite surface antigen genes | Q33925389 | ||
| Association of two novel proteins, TbMP52 and TbMP48, with the Trypanosoma brucei RNA editing complex | Q33966791 | ||
| Four related proteins of the Trypanosoma brucei RNA editing complex. | Q34012441 | ||
| Assembly and function of the RNA editing complex in Trypanosoma brucei requires band III protein | Q34278417 | ||
| Modification of Trypanosoma brucei mitochondrial rRNA by posttranscriptional 3' polyuridine tail formation | Q36742522 | ||
| Trypanosome U-deletional RNA editing involves guide RNA-directed endonuclease cleavage, terminal U exonuclease, and RNA ligase activities | Q37376878 | ||
| The two RNA ligases of the Trypanosoma brucei RNA editing complex: cloning the essential band IV gene and identifying the band V gene | Q39526694 | ||
| Uridylate addition and RNA ligation contribute to the specificity of kinetoplastid insertion RNA editing | Q39540061 | ||
| TbMP81 is required for RNA editing in Trypanosoma brucei | Q39647029 | ||
| Distinct functions of two RNA ligases in active Trypanosoma brucei RNA editing complexes. | Q39674967 | ||
| The involvement of gRNA-binding protein gBP21 in RNA editing-an in vitro and in vivo analysis | Q39727472 | ||
| Guide RNA-directed uridine insertion RNA editing in vitro | Q41078882 | ||
| Guide RNAs in kinetoplastid mitochondria have a nonencoded 3′ oligo(U) tail involved in recognition of the preedited region | Q41941621 | ||
| A 100-kD complex of two RNA-binding proteins from mitochondria of Leishmania tarentolae catalyzes RNA annealing and interacts with several RNA editing components | Q41944052 | ||
| Purification of a functional enzymatic editing complex from Trypanosoma brucei mitochondria | Q42623988 | ||
| Isolation and characterization of a U-specific 3'-5'-exonuclease from mitochondria of Leishmania tarentolae | Q43560416 | ||
| Native gel analysis of ribonucleoprotein complexes from a Leishmania tarentolae mitochondrial extract | Q46709089 | ||
| Trypanosome mitochondrial 3' terminal uridylyl transferase (TUTase): the key enzyme in U-insertion/deletion RNA editing | Q46840499 | ||
| An RNA ligase essential for RNA editing and survival of the bloodstream form of Trypanosoma brucei | Q46859677 | ||
| T. brucei RNA editing: adenosine nucleotides inversely affect U-deletion and U-insertion reactions at mRNA cleavage | Q47858606 | ||
| Knockout of the glutamate dehydrogenase gene in bloodstream Trypanosoma brucei in culture has no effect on editing of mitochondrial mRNAs | Q47954472 | ||
| Sequence of a cDNA for the ND1 gene from Leishmania major: potential uridine addition in the polyadenosine tail | Q48288023 | ||
| Isolation of kinetoplast-mitochondrial complexes from Leishmania tarentolae. | Q53816030 | ||
| RNA editing: a mechanism for gRNA-specified uridylate insertion into precursor mRNA. | Q54649086 | ||
| Reviving the message | Q59031324 | ||
| Direct visualization of uridylate deletion in vitro suggests a mechanism for kinetoplastid RNA editing | Q71000760 | ||
| RNA ligase and its involvement in guide RNA/mRNA chimera formation. Evidence for a cleavage-ligation mechanism of Trypanosoma brucei mRNA editing | Q71686585 | ||
| P433 | issue | 4 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | mitochondrion | Q39572 |
| P304 | page(s) | 913-924 | |
| P577 | publication date | 2003-02-01 | |
| P1433 | published in | The EMBO Journal | Q1278554 |
| P1476 | title | Isolation of a U-insertion/deletion editing complex from Leishmania tarentolae mitochondria | |
| P478 | volume | 22 |
| Q35447618 | A novel 4E-interacting protein in Leishmania is involved in stage-specific translation pathways. |
| Q33648319 | A protein-protein interaction map of trypanosome ~20S editosomes. |
| Q35977107 | A tale of two TUTases |
| Q33495474 | An electrochemiluminescent aptamer switch for a high-throughput assay of an RNA editing reaction |
| Q42851304 | An essential role of KREPB4 in RNA editing and structural integrity of the editosome in Trypanosoma brucei. |
| Q34107359 | Analysis of spliceosomal proteins in Trypanosomatids reveals novel functions in mRNA processing |
| Q36552454 | Antisense Transcripts Delimit Exonucleolytic Activity of the Mitochondrial 3' Processome to Generate Guide RNAs |
| Q36620843 | Basal splicing factors regulate the stability of mature mRNAs in trypanosomes. |
| Q24807316 | Catalytic mechanism of Escherichia coli ribonuclease III: kinetic and inhibitor evidence for the involvement of two magnesium ions in RNA phosphodiester hydrolysis |
| Q37371527 | Comparative analysis of editosome proteins in trypanosomatids |
| Q34034508 | Complete set of mitochondrial pan-edited mRNAs in Leishmania mexicana amazonensis LV78. |
| Q42040628 | Compositionally and functionally distinct editosomes in Trypanosoma brucei |
| Q38974952 | Constructive edge of uridylation-induced RNA degradation |
| Q27675299 | Crystal structure of a heterodimer of editosome interaction proteins in complex with two copies of a cross-reacting nanobody |
| Q41149338 | Determinants for association and guide RNA-directed endonuclease cleavage by purified RNA editing complexes from Trypanosoma brucei. |
| Q37168963 | Differential functions of two editosome exoUases in Trypanosoma brucei. |
| Q52552449 | Disruption of the zinc finger motifs in the Leishmania tarentolae LC-4 (=TbMP63) L-complex editing protein affects the stability of the L-complex. |
| Q37215358 | Evolutionary changes in the Leishmania eIF4F complex involve variations in the eIF4E-eIF4G interactions |
| Q33935232 | Functional complementation of Trypanosoma brucei RNA in vitro editing with recombinant RNA ligase |
| Q35630360 | Genome-wide analysis of small nucleolar RNAs of Leishmania major reveals a rich repertoire of RNAs involved in modification and processing of rRNA. |
| Q37104541 | Guide RNA-binding complex from mitochondria of trypanosomatids |
| Q42920811 | Guide to the nomenclature of kinetoplastid RNA editing: a proposal |
| Q36812711 | High-throughput sequencing of partially edited trypanosome mRNAs reveals barriers to editing progression and evidence for alternative editing |
| Q34144027 | Highly efficient tandem affinity purification of trypanosome protein complexes based on a novel epitope combination |
| Q89830480 | Identification of a novel base J binding protein complex involved in RNA polymerase II transcription termination in trypanosomes |
| Q33980092 | Identification of genes required for embryo development in Arabidopsis |
| Q41335243 | Identification of specific inhibitors for a trypanosomatid RNA editing reaction |
| Q24294457 | Identification, cloning, and functional analysis of the human U6 snRNA-specific terminal uridylyl transferase |
| Q40446650 | In Trypanosoma brucei RNA editing, band II enables recognition specifically at each step of the U insertion cycle |
| Q37390528 | Inhibitors of RNA editing as potential chemotherapeutics against trypanosomatid pathogens |
| Q41876511 | Interactions of mRNAs and gRNAs involved in trypanosome mitochondrial RNA editing: structure probing of a gRNA bound to its cognate mRNA. |
| Q44441848 | Is the Trypanosoma brucei REL1 RNA ligase specific for U-deletion RNA editing, and is the REL2 RNA ligase specific for U-insertion editing? |
| Q64462850 | Isolation and Compositional Analysis of Trypanosomatid Editosomes |
| Q42250864 | KREPA4, an RNA binding protein essential for editosome integrity and survival of Trypanosoma brucei |
| Q37534381 | Kinetoplast DNA-encoded ribosomal protein S12: a possible functional link between mitochondrial RNA editing and translation in Trypanosoma brucei |
| Q90459807 | Lexis and Grammar of Mitochondrial RNA Processing in Trypanosomes |
| Q41062582 | Mechanism of U insertion RNA editing in trypanosome mitochondria: the bimodal TUTase activity of the core complex |
| Q27027472 | Mitochondrial RNA editing in trypanosomes: small RNAs in control |
| Q35141535 | Mitochondrial RNA processing in trypanosomes |
| Q40036643 | Mitochondrial complexes in Trypanosoma brucei: a novel complex and a unique oxidoreductase complex |
| Q34365521 | Mitochondrial proteins and complexes in Leishmania and Trypanosoma involved in U-insertion/deletion RNA editing |
| Q42633279 | Multiple terminal uridylyltransferases of trypanosomes |
| Q34800149 | Naphthalene-based RNA editing inhibitor blocks RNA editing activities and editosome assembly in Trypanosoma brucei |
| Q33451626 | Novel TUTase associates with an editosome-like complex in mitochondria of Trypanosoma brucei |
| Q43814314 | Nutritional stress affects an atypical cap-binding protein in Leishmania |
| Q26827664 | Organellar RNA editing |
| Q60912013 | Pentatricopeptide repeat poly(A) binding protein KPAF4 stabilizes mitochondrial mRNAs in Trypanosoma brucei |
| Q34774754 | Pentatricopeptide repeat proteins stimulate mRNA adenylation/uridylation to activate mitochondrial translation in trypanosomes |
| Q34702943 | RBP16 stimulates trypanosome RNA editing in vitro at an early step in the editing reaction. |
| Q33569675 | REH2 RNA helicase in kinetoplastid mitochondria: ribonucleoprotein complexes and essential motifs for unwinding and guide RNA (gRNA) binding |
| Q33705033 | RET1-catalyzed uridylylation shapes the mitochondrial transcriptome in Trypanosoma brucei |
| Q34592918 | RNA binding and core complexes constitute the U-insertion/deletion editosome |
| Q34702837 | RNA editing complex interactions with a site for full-round U deletion in Trypanosoma brucei |
| Q46610701 | RNA editing uridylyltransferases of trypanosomatids |
| Q38335032 | RNA interference analyses suggest a transcript-specific regulatory role for mitochondrial RNA-binding proteins MRP1 and MRP2 in RNA editing and other RNA processing in Trypanosoma brucei |
| Q38342916 | RNA-editing terminal uridylyl transferase 1: identification of functional domains by mutational analysis |
| Q80700168 | RNA-protein interactions in assembled editing complexes in trypanosomes |
| Q35080361 | Reconstitution of full-round uridine-deletion RNA editing with three recombinant proteins |
| Q33762846 | Reconstitution of uridine-deletion precleaved RNA editing with two recombinant enzymes. |
| Q44612182 | Separate insertion and deletion subcomplexes of the Trypanosoma brucei RNA editing complex. |
| Q43149089 | Snapshots of the RNA editing machine in trypanosomes captured at different assembly stages in vivo |
| Q43192506 | Structural basis for UTP specificity of RNA editing TUTases from Trypanosoma brucei |
| Q36803161 | Structure and function of the native and recombinant mitochondrial MRP1/MRP2 complex from Trypanosoma brucei |
| Q28085634 | Structure and intrinsic disorder of the proteins of the Trypanosoma brucei editosome |
| Q27660632 | Structure of the Mitochondrial Editosome-Like Complex Associated TUTase 1 Reveals Divergent Mechanisms of UTP Selection and Domain Organization |
| Q33480457 | Structure of the core editing complex (L-complex) involved in uridine insertion/deletion RNA editing in trypanosomatid mitochondria |
| Q27665314 | Structures of a key interaction protein from the Trypanosoma brucei editosome in complex with single domain antibodies |
| Q53583889 | Substrate determinants for RNA editing and editing complex interactions at a site for full-round U insertion. |
| Q43226651 | T. brucei RNA editing: action of the U-insertional TUTase within a U-deletion cycle. |
| Q33247054 | Taking U out, with two nucleases? |
| Q37579589 | TbDSS-1, an essential Trypanosoma brucei exoribonuclease homolog that has pleiotropic effects on mitochondrial RNA metabolism |
| Q38289525 | TbMP42 is a structure-sensitive ribonuclease that likely follows a metal ion catalysis mechanism |
| Q44487520 | TbMP57 is a 3' terminal uridylyl transferase (TUTase) of the Trypanosoma brucei editosome |
| Q36575689 | TbRGG1, an essential protein involved in kinetoplastid RNA metabolism that is associated with a novel multiprotein complex. |
| Q37055752 | Terminal RNA uridylyltransferases of trypanosomes |
| Q35968493 | The double-stranded-RNA-binding motif: interference and much more |
| Q44697376 | The effect of RNA interference Down-regulation of RNA editing 3'-terminal uridylyl transferase (TUTase) 1 on mitochondrial de novo protein synthesis and stability of respiratory complexes in Trypanosoma brucei |
| Q37940423 | The structural landscape of native editosomes in African trypanosomes |
| Q33527428 | The zinc-fingers of KREPA3 are essential for the complete editing of mitochondrial mRNAs in Trypanosoma brucei |
| Q39940448 | Trypanosoma brucei RNA editing complex: band II is structurally critical and maintains band V ligase, which is nonessential |
| Q38569224 | Trypanosoma brucei RNA editing protein TbMP42 (band VI) is crucial for the endonucleolytic cleavages but not the subsequent steps of U-deletion and U-insertion. |
| Q24610301 | Trypanosome REH1 is an RNA helicase involved with the 3'-5' polarity of multiple gRNA-guided uridine insertion/deletion RNA editing |
| Q26777576 | Trypanosome RNA editing: the complexity of getting U in and taking U out |
| Q35976801 | Two distinct roles for terminal uridylyl transferases in RNA editing |
| Q34143005 | Two splicing factors carrying serine-arginine motifs, TSR1 and TSR1IP, regulate splicing, mRNA stability, and rRNA processing in Trypanosoma brucei. |
| Q36535105 | U-Insertion/Deletion mRNA-Editing Holoenzyme: Definition in Sight |
| Q27640954 | UTP-bound and Apo Structures of a Minimal RNA Uridylyltransferase |
| Q36282126 | Unexplained complexity of the mitochondrial genome and transcriptome in kinetoplastid flagellates |
| Q40358260 | Uridine insertion/deletion RNA editing in Trypanosomatids: specific stimulation in vitro of Leishmania tarentolae REL1 RNA ligase activity by the MP63 zinc finger protein |
| Q37246104 | Uridine insertion/deletion RNA editing in trypanosomatid mitochondria: In search of the editosome |
| Q35158070 | Uridine insertion/deletion editing in trypanosomes: a playground for RNA-guided information transfer |
| Q44577937 | Uridylate-specific 3' 5'-exoribonucleases involved in uridylate-deletion RNA editing in trypanosomatid mitochondria. |
| Q37799569 | When you can’t trust the DNA: RNA editing changes transcript sequences |
| Q38569122 | gRNA/pre-mRNA annealing and RNA chaperone activities of RBP16. |
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