Validation of a set of reference genes to study response to herbicide stress in grasses

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Validation of a set of reference genes to study response to herbicide stress in grasses is …
instance of (P31):
scholarly articleQ13442814

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P6179Dimensions Publication ID1011586980
P356DOI10.1186/1756-0500-5-18
P932PMC publication ID3292489
P698PubMed publication ID22233533
P5875ResearchGate publication ID221736959

P2093author name stringChristophe Délye
Jean-Marie Heydel
Fanny Pernin
Cécile Petit
P2860cites workAccurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genesQ24534395
Validating internal controls for quantitative plant gene expression studiesQ24804305
Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT MethodQ25938999
Primer3 on the WWW for general users and for biologist programmersQ27861030
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Housekeeping genes as internal standards: use and limitsQ29302686
Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper – Excel-based tool using pair-wise correlationsQ29304271
Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data setsQ29615465
Exploring valid reference genes for gene expression studies in Brachypodium distachyon by real-time PCR.Q30851279
Selection of reference genes for quantitative real-time PCR expression studies in the apomictic and sexual grass Brachiaria brizanthaQ33477648
Validation of reference genes for quantitative RT-PCR studies of gene expression in perennial ryegrass (Lolium perenne L.)Q33525408
A composite transcriptional signature differentiates responses towards closely related herbicides in Arabidopsis thaliana and Brassica napusQ33629348
Validation of reference genes as internal control for studying viral infections in cereals by quantitative real-time RT-PCR.Q33632746
Evolution in action: plants resistant to herbicidesQ34101347
Quantification of mRNA using real-time reverse transcription PCR (RT-PCR): trends and problems.Q34146463
Control genes in quantitative molecular biological techniques: the variability of invariance.Q34377216
Validation of housekeeping genes as internal control for studying gene expression in rice by quantitative real-time PCR.Q34524574
A quantitative RT-PCR platform for high-throughput expression profiling of 2500 rice transcription factorsQ35880552
Real-time RT-PCR normalisation; strategies and considerations.Q36091282
Non-target-site herbicide resistance: a family business.Q36680032
Prevalence of cross- or multiple resistance to the acetyl-coenzyme A carboxylase inhibitors fenoxaprop, clodinafop and pinoxaden in black-grass (Alopecurus myosuroides Huds.) in FranceQ43270390
Safener responsiveness and multiple herbicide resistance in the weed black-grass (Alopecurus myosuroides).Q43276485
Cross-resistance patterns to ACCase-inhibiting herbicides conferred by mutant ACCase isoforms in Alopecurus myosuroides Huds. (black-grass), re-examined at the recommended herbicide field rateQ46553587
A combined strategy of "in silico" transcriptome analysis and web search engine optimization allows an agile identification of reference genes suitable for normalization in gene expression studies.Q51098259
The lack of a systematic validation of reference genes: a serious pitfall undervalued in reverse transcription-polymerase chain reaction (RT-PCR) analysis in plants.Q51887823
Genome-wide identification and evaluation of novel internal control genes for Q-PCR based transcript normalization in wheat.Q51903481
Stable internal reference genes for normalization of real-time RT-PCR in tobacco (Nicotiana tabacum) during development and abiotic stress.Q51916986
Geographical variation in resistance to acetyl-coenzyme A carboxylase-inhibiting herbicides across the range of the arable weed Alopecurus myosuroides (black-grass)Q60583604
P921main subjectherbicideQ178266
P304page(s)18
P577publication date2012-01-10
P1433published inBMC Research NotesQ15762797
P1476titleValidation of a set of reference genes to study response to herbicide stress in grasses
P478volume5

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cites work (P2860)
Q35743360ALOMYbase, a resource to investigate non-target-site-based resistance to herbicides inhibiting acetolactate-synthase (ALS) in the major grass weed Alopecurus myosuroides (black-grass).
Q28656289Assessing reference genes for accurate transcript normalization using quantitative real-time PCR in pearl millet [Pennisetum glaucum (L.) R. Br]
Q59115123Evaluation of six commonly used reference genes for gene expression studies in herbicide-resistantAvena fatuabiotypes
Q41337654Herbicide Safeners Decrease Sensitivity to Herbicides Inhibiting Acetolactate-Synthase and Likely Activate Non-Target-Site-Based Resistance Pathways in the Major Grass Weed Lolium sp. (Rye-Grass).
Q41505241RNA-Seq analysis of rye-grass transcriptomic response to an herbicide inhibiting acetolactate-synthase identifies transcripts linked to non-target-site-based resistance.
Q28488146Reference genes to study herbicide stress response in Lolium sp.: up-regulation of P450 genes in plants resistant to acetolactate-synthase inhibitors
Q33587303Selection of relatively exact reference genes for gene expression studies in goosegrass (Eleusine indica) under herbicide stress
Q40994358Transcription of putative tonoplast transporters in response to glyphosate and paraquat stress in Conyza bonariensis and Conyza canadensis and selection of reference genes for qRT-PCR.
Q38604825Transcriptome Profiling to Identify Genes Involved in Mesosulfuron-Methyl Resistance in Alopecurus aequalis