The transcriptional landscape and small RNAs of Salmonella enterica serovar Typhimurium.

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The transcriptional landscape and small RNAs of Salmonella enterica serovar Typhimurium. is …
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scholarly articleQ13442814

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P819ADS bibcode2012PNAS..109E1277K
P356DOI10.1073/PNAS.1201061109
P932PMC publication ID3356629
P698PubMed publication ID22538806
P5875ResearchGate publication ID235606505

P50authorJörg VogelQ1107809
Amanda J LohanQ56562786
Yanjie ChaoQ57433083
Andrew Ds CameronQ59193147
Pimlapas LeekitcharoenphonQ60545296
Gemma C LangridgeQ30349071
Jay C. D. HintonQ37022602
David W. UsseryQ37380694
Carsten KrögerQ39066955
Kai PapenfortQ41716560
Charles J. DormanQ42123977
Nicholas ThomsonQ42305770
Kristian HändlerQ43120783
Karsten HokampQ47451213
Brendan LoftusQ56395471
P2093author name stringShane C Dillon
Sacha Lucchini
Alexandra Sittka
Magali Hébrard
Sathesh K Sivasankaran
Aoife Colgan
P2860cites workSalmonella bongori provides insights into the evolution of the SalmonellaeQ21131414
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Complete genome sequence of Salmonella enterica serovar Typhimurium LT2Q22122369
Identification of novel small RNAs using comparative genomics and microarraysQ24601229
CRISPR RNA maturation by trans-encoded small RNA and host factor RNase IIIQ24628207
RNomics in Escherichia coli detects new sRNA species and indicates parallel transcriptional output in bacteriaQ24641843
Small RNAs encoded within genetic islands of Salmonella typhimurium show host-induced expression and role in virulenceQ24641915
Repression of small toxic protein synthesis by the Sib and OhsC small RNAsQ24648490
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SigmaE-dependent small RNAs of Salmonella respond to membrane stress by accelerating global omp mRNA decayQ24669800
A dual function for a bacterial small RNA: SgrS performs base pairing-dependent regulation and encodes a functional polypeptideQ24683800
The KdpF subunit is part of the K(+)-translocating Kdp complex of Escherichia coli and is responsible for stabilization of the complex in vitroQ73297569
Prokaryotic transcriptomics: a new view on regulation, physiology and pathogenicityQ84947079
A survey of small RNA-encoding genes in Escherichia coliQ24684021
The transcriptional landscape of Chlamydia pneumoniaeQ27825840
Global analysis of small RNA and mRNA targets of HfqQ28184898
Specific and pleiotropic patterns of mRNA regulation by ArcZ, a conserved, Hfq-dependent small RNAQ28257497
The primary transcriptome of the major human pathogen Helicobacter pyloriQ28273545
Regulatory RNA in bacterial pathogensQ28288142
The global burden of typhoid feverQ29619215
RNA sequencing: advances, challenges and opportunitiesQ29619605
Characterization of nucleotide pools as a function of physiological state in Escherichia coliQ33304153
FRT-seq: amplification-free, strand-specific transcriptome sequencingQ33524786
Deep sequencing analysis of the Methanosarcina mazei Gö1 transcriptome in response to nitrogen availability.Q33564641
sRNAscanner: a computational tool for intergenic small RNA detection in bacterial genomesQ33654291
Immobilization of Escherichia coli RNA polymerase and location of binding sites by use of chromatin immunoprecipitation and microarraysQ33937839
A fundamental regulatory mechanism operating through OmpR and DNA topology controls expression of Salmonella pathogenicity islands SPI-1 and SPI-2Q34211607
Robust Salmonella metabolism limits possibilities for new antimicrobials.Q34502598
An experimentally anchored map of transcriptional start sites in the model cyanobacterium Synechocystis sp. PCC6803.Q34549972
Insights into transcriptional regulation and sigma competition from an equilibrium model of RNA polymerase binding to DNAQ34600135
A small non-coding RNA of the invasion gene island (SPI-1) represses outer membrane protein synthesis from the Salmonella core genomeQ34707860
Deep sequencing of Salmonella RNA associated with heterologous Hfq proteins in vivo reveals small RNAs as a major target class and identifies RNA processing phenotypesQ34971662
Technologies and approaches to elucidate and model the virulence program of salmonellaQ35025547
An altered rpoS allele contributes to the avirulence of Salmonella typhimurium LT2.Q35533809
Genome-wide antisense transcription drives mRNA processing in bacteriaQ35647819
Anatomy of Escherichia coli sigma70 promoters.Q35658237
Chronic and acute infection of the gall bladder by Salmonella Typhi: understanding the carrier stateQ35663955
Gut inflammation can boost horizontal gene transfer between pathogenic and commensal EnterobacteriaceaeQ35709285
Peptide-assisted degradation of the Salmonella MgtC virulence factorQ36456611
Global analysis of Escherichia coli RNA degradosome function using DNA microarraysQ36852086
Ribosomes bind leaderless mRNA in Escherichia coli through recognition of their 5'-terminal AUGQ36909661
Salmonellae interplay with host cellsQ37008201
Small membrane proteins found by comparative genomics and ribosome binding site models.Q37039330
Population structure, origins and evolution of major Salmonella enterica clonesQ37459714
Epidemic multiple drug resistant Salmonella Typhimurium causing invasive disease in sub-Saharan Africa have a distinct genotypeQ37471898
Invasive salmonellosis in MalawiQ37595236
A 17-year review of foodborne outbreaks: describing the continuing decline in England and Wales (1992-2008).Q37778868
Studying bacterial transcriptomes using RNA-seqQ37796158
How to become a top model: impact of animal experimentation on human Salmonella disease research.Q37845999
cis-antisense RNA, another level of gene regulation in bacteria.Q37850790
The challenge of relating gene expression to the virulence of Salmonella enterica serovar Typhimurium.Q37851209
Intestinal and chronic infections: Salmonella lifestyles in hostile environmentsQ38114021
BioProspector: discovering conserved DNA motifs in upstream regulatory regions of co-expressed genes.Q38303029
Aromatic-dependent Salmonella typhimurium are non-virulent and effective as live vaccinesQ39513114
During infection of epithelial cells Salmonella enterica serovar Typhimurium undergoes a time-dependent transcriptional adaptation that results in simultaneous expression of three type 3 secretion systemsQ40046693
Vital signs: incidence and trends of infection with pathogens transmitted commonly through food--foodborne diseases active surveillance network, 10 U.S. sites, 1996-2010.Q41428597
'Intergenic' blr gene in Escherichia coli encodes a 41-residue membrane protein affecting intrinsic susceptibility to certain inhibitors of peptidoglycan synthesisQ42631237
Genome sequences of Salmonella enterica serovar typhimurium, Choleraesuis, Dublin, and Gallinarum strains of well- defined virulence in food-producing animalsQ42793275
Control of rRNA expression by small molecules is dynamic and nonredundantQ44530417
The global burden of nontyphoidal Salmonella gastroenteritisQ50050617
Regulation of Salmonella pathogenicity island 2 genes by independent environmental signalsQ50077992
The estimation of doses of Salmonella typhimurium suitable for the experimental production of disease in calvesQ50253763
Transcription regulation by initiating NTP concentration: rRNA synthesis in bacteria.Q53959823
A global view of Escherichia coli Rsd protein and its interactions.Q54398528
The transition between transcriptional initiation and elongation in E. coli is highly variable and often rate limiting.Q54450677
P433issue20
P407language of work or nameEnglishQ1860
P921main subjectSalmonella entericaQ2264864
P304page(s)E1277-86
P577publication date2012-04-25
P1433published inProceedings of the National Academy of Sciences of the United States of AmericaQ1146531
P1476titleThe transcriptional landscape and small RNAs of Salmonella enterica serovar Typhimurium
P478volume109

Reverse relations

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