| scholarly article | Q13442814 |
| P50 | author | Masatoshi Miyakoshi | Q58211926 |
| P2093 | author name string | Jörg Vogel | |
| Yasuhiro Sone | |||
| Gianluca Matera | |||
| Kanako Maki | |||
| P2860 | cites work | Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq | Q21145046 |
| Dual RNA-seq unveils noncoding RNA functions in host–pathogen interactions | Q24285722 | ||
| Global transcriptional start site mapping using differential RNA sequencing reveals novel antisense RNAs in Escherichia coli | Q24490458 | ||
| Global RNA recognition patterns of post-transcriptional regulators Hfq and CsrA revealed by UV crosslinking in vivo | Q24490554 | ||
| A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coli | Q24536169 | ||
| Comparative genomics boosts target prediction for bacterial small RNAs | Q24621557 | ||
| The base-pairing RNA spot 42 participates in a multioutput feedforward loop to help enact catabolite repression in Escherichia coli | Q24622607 | ||
| RNomics in Escherichia coli detects new sRNA species and indicates parallel transcriptional output in bacteria | Q24641843 | ||
| Caught at its own game: regulatory small RNA inactivated by an inducible transcript mimicking its target | Q24647466 | ||
| Spot 42 RNA mediates discoordinate expression of the E. coli galactose operon | Q24674172 | ||
| Aerobic regulation of the sucABCD genes of Escherichia coli, which encode alpha-ketoglutarate dehydrogenase and succinyl coenzyme A synthetase: roles of ArcA, Fnr, and the upstream sdhCDAB promoter | Q24678384 | ||
| Genetic mapping of katG, a locus that affects synthesis of the bifunctional catalase-peroxidase hydroperoxidase I in Escherichia coli | Q24682447 | ||
| Translational control and target recognition by Escherichia coli small RNAs in vivo | Q24684847 | ||
| Glucose repression of the Escherichia coli sdhCDAB operon, revisited: regulation by the CRP*cAMP complex. | Q24813790 | ||
| Structural basis for RNA 3'-end recognition by Hfq | Q27670724 | ||
| Structural, kinetic and proteomic characterization of acetyl phosphate-dependent bacterial protein acetylation | Q27683517 | ||
| One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products | Q27860842 | ||
| The Listeria transcriptional landscape from saprophytism to virulence. | Q28131414 | ||
| Global analysis of small RNA and mRNA targets of Hfq | Q28184898 | ||
| MicL, a new σE-dependent sRNA, combats envelope stress by repressing synthesis of Lpp, the major outer membrane lipoprotein | Q28244052 | ||
| Specific and pleiotropic patterns of mRNA regulation by ArcZ, a conserved, Hfq-dependent small RNA | Q28257497 | ||
| Noncanonical repression of translation initiation through small RNA recruitment of the RNA chaperone Hfq | Q28263595 | ||
| The primary transcriptome of the major human pathogen Helicobacter pylori | Q28273545 | ||
| In Vivo Cleavage Map Illuminates the Central Role of RNase E in Coding and Non-coding RNA Pathways | Q28583172 | ||
| The CpxQ sRNA Negatively Regulates Skp To Prevent Mistargeting of β-Barrel Outer Membrane Proteins into the Cytoplasmic Membrane | Q28601473 | ||
| Acetyl-phosphate is a critical determinant of lysine acetylation in E. coli. | Q50855757 | ||
| Bacterial RNA Biology on a Genome Scale. | Q52390766 | ||
| Global Maps of ProQ Binding In Vivo Reveal Target Recognition via RNA Structure and Stability Control at mRNA 3′ Ends | Q62762453 | ||
| Regulation of alpha-ketoglutarate dehydrogenase formation in Escherichia coli | Q71160718 | ||
| Regulation of fumarase (fumB) gene expression in Escherichia coli in response to oxygen, iron and heme availability: role of the arcA, fur, and hemA gene products | Q74001513 | ||
| Transcription and transcript processing in the sdhCDAB-sucABCD operon of Escherichia coli | Q77160221 | ||
| Regulation of acetate metabolism and coordination with the TCA cycle via a processed small RNA | Q90784898 | ||
| Mechanistic study of base-pairing small regulatory RNAs in bacteria. | Q38969993 | ||
| The ams-1 and rne-3071 temperature-sensitive mutations in the ams gene are in close proximity to each other and cause substitutions within a domain that resembles a product of the Escherichia coli mre locus | Q39929376 | ||
| Superfolder GFP reporters validate diverse new mRNA targets of the classic porin regulator, MicF RNA. | Q40028342 | ||
| A 3' UTR-Derived Small RNA Provides the Regulatory Noncoding Arm of the Inner Membrane Stress Response | Q40067332 | ||
| Molecular mechanism of mRNA repression in trans by a ProQ-dependent small RNA. | Q40280690 | ||
| Regulation of bacterial conjugation in microaerobiosis by host-encoded functions ArcAB and sdhABCD. | Q40413923 | ||
| Intestinal short-chain fatty acids alter Salmonella typhimurium invasion gene expression and virulence through BarA/SirA. | Q40687509 | ||
| A 3' external transcribed spacer in a tRNA transcript acts as a sponge for small RNAs to prevent transcriptional noise | Q41043929 | ||
| GRIL-seq provides a method for identifying direct targets of bacterial small regulatory RNA by in vivo proximity ligation | Q41494241 | ||
| Cross talk between ABC transporter mRNAs via a target mRNA-derived sponge of the GcvB small RNA | Q41516624 | ||
| Global Mapping of Small RNA-Target Interactions in Bacteria | Q41926065 | ||
| RNA Sequencing Identifies New RNase III Cleavage Sites in Escherichia coli and Reveals Increased Regulation of mRNA. | Q42094679 | ||
| Talk among yourselves: RNA sponges mediate cross talk between functionally related messenger RNAs | Q42416951 | ||
| The seed region of a small RNA drives the controlled destruction of the target mRNA by the endoribonuclease RNase E. | Q42428502 | ||
| Protein acetylation dynamics in response to carbon overflow in Escherichia coli | Q42684891 | ||
| An infection-relevant transcriptomic compendium for Salmonella enterica Serovar Typhimurium | Q42774408 | ||
| Pervasive post-transcriptional control of genes involved in amino acid metabolism by the Hfq-dependent GcvB small RNA. | Q43576806 | ||
| Regulation of succinate dehydrogenase (sdhCDAB) operon expression in Escherichia coli in response to carbon supply and anaerobiosis: role of ArcA and Fnr. | Q46102714 | ||
| Sensing of 5' monophosphate by Escherichia coli RNase G can significantly enhance association with RNA and stimulate the decay of functional mRNA transcripts in vivo | Q46851698 | ||
| New aspects of RNA-based regulation by Hfq and its partner sRNAs | Q47416504 | ||
| Involvement of formate dehydrogenases in stationary phase oxidative stress tolerance in Escherichia coli | Q47433693 | ||
| Tricarboxylic Acid Cycle and Glyoxylate Bypass | Q47700957 | ||
| DOOR: a prokaryotic operon database for genome analyses and functional inference | Q47884367 | ||
| Hfq and its constellation of RNA | Q29615791 | ||
| Culture medium for enterobacteria | Q29616466 | ||
| Topological analysis of the aerobic membrane-bound formate dehydrogenase of Escherichia coli. | Q33744185 | ||
| The acetate switch | Q33755202 | ||
| Rapid and highly efficient method for scarless mutagenesis within the Salmonella enterica chromosome | Q33802758 | ||
| TargetRNA2: identifying targets of small regulatory RNAs in bacteria | Q33860759 | ||
| Identification of bacteriophage-encoded anti-sRNAs in pathogenic Escherichia coli | Q33922213 | ||
| Epitope tagging of chromosomal genes in Salmonella | Q33953109 | ||
| Operon: a group of genes with the expression coordinated by an operator | Q33972353 | ||
| An atlas of Hfq-bound transcripts reveals 3' UTRs as a genomic reservoir of regulatory small RNAs | Q34033315 | ||
| Regulatory small RNAs from the 3' regions of bacterial mRNAs | Q34043154 | ||
| Revisiting the coding potential of the E. coli genome through Hfq co-immunoprecipitation | Q34122762 | ||
| Unprecedented high-resolution view of bacterial operon architecture revealed by RNA sequencing | Q34165431 | ||
| Long-range chromosome organization in E. coli: a site-specific system isolates the Ter macrodomain | Q34244961 | ||
| The transcriptional landscape and small RNAs of Salmonella enterica serovar Typhimurium. | Q34248983 | ||
| Robust Salmonella metabolism limits possibilities for new antimicrobials. | Q34502598 | ||
| Regulation of a polyamine transporter by the conserved 3' UTR-derived sRNA SorX confers resistance to singlet oxygen and organic hydroperoxides in Rhodobacter sphaeroides | Q34534236 | ||
| Competing endogenous RNAs: a target-centric view of small RNA regulation in bacteria | Q34540586 | ||
| IntaRNA 2.0: enhanced and customizable prediction of RNA-RNA interactions | Q34556231 | ||
| A trans-acting riboswitch controls expression of the virulence regulator PrfA in Listeria monocytogenes | Q35012926 | ||
| Repressor activity of the RpoS/σS-dependent RNA polymerase requires DNA binding | Q35088972 | ||
| Recognition of the small regulatory RNA RydC by the bacterial Hfq protein | Q35111238 | ||
| PolyU tail of rho-independent terminator of bacterial small RNAs is essential for Hfq action | Q35164771 | ||
| Cloning, characterization, and functional expression of acs, the gene which encodes acetyl coenzyme A synthetase in Escherichia coli | Q35586072 | ||
| How do base-pairing small RNAs evolve? | Q35620619 | ||
| The ancestral SgrS RNA discriminates horizontally acquired Salmonella mRNAs through a single G-U wobble pair | Q35882335 | ||
| Identification of bacterial sRNA regulatory targets using ribosome profiling. | Q36337696 | ||
| RegulonDB version 9.0: high-level integration of gene regulation, coexpression, motif clustering and beyond. | Q36434726 | ||
| Formate acts as a diffusible signal to induce Salmonella invasion | Q36747272 | ||
| Inverse regulation of Fe- and Ni-containing SOD genes by a Fur family regulator Nur through small RNA processed from 3'UTR of the sodF mRNA | Q37574204 | ||
| Small RNA interactome of pathogenic E. coli revealed through crosslinking of RNase E. | Q37618005 | ||
| Regulation of bacterial metabolism by small RNAs using diverse mechanisms | Q38135494 | ||
| Small RNA functions in carbon metabolism and virulence of enteric pathogens | Q38235406 | ||
| The Streptococcus mutans irvA gene encodes a trans-acting riboregulatory mRNA. | Q38301782 | ||
| Small RNAs in bacteria and archaea: who they are, what they do, and how they do it. | Q38571330 | ||
| P275 | copyright license | Creative Commons Attribution 4.0 International | Q20007257 |
| P6216 | copyright status | copyrighted | Q50423863 |
| P433 | issue | 4 | |
| P407 | language of work or name | English | Q1860 |
| P304 | page(s) | 2075-2088 | |
| P577 | publication date | 2019-02-01 | |
| P1433 | published in | Nucleic Acids Research | Q135122 |
| P1476 | title | Functional expansion of a TCA cycle operon mRNA by a 3' end-derived small RNA. | |
| P478 | volume | 47 |
| Q89522028 | Differential evolution in 3'UTRs leads to specific gene expression in Staphylococcus |
| Q92211815 | Feedback regulation of small RNA processing by the cleavage product |
| Q98192446 | Gene autoregulation by 3' UTR-derived bacterial small RNAs |
| Q90470293 | Switching fatty acid metabolism by an RNA-controlled feed forward loop |
| Q92167406 | The conserved 3' UTR-derived small RNA NarS mediates mRNA crossregulation during nitrate respiration |
| Q90657919 | Trans-Acting Small RNAs and Their Effects on Gene Expression in Escherichia coli and Salmonella enterica |
Search more.