Selection and validation of reference genes for gene expression analysis in switchgrass (Panicum virgatum) using quantitative real-time RT-PCR.

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Selection and validation of reference genes for gene expression analysis in switchgrass (Panicum virgatum) using quantitative real-time RT-PCR. is …
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scholarly articleQ13442814

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P819ADS bibcode2014PLoSO...991474G
P356DOI10.1371/JOURNAL.PONE.0091474
P932PMC publication ID3951385
P698PubMed publication ID24621568
P5875ResearchGate publication ID260757691

P50authorEduardo BlumwaldQ59197131
P2093author name stringAllen Van Deynze
Jacinta Gimeno
Nicholas Eattock
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Identification and evaluation of new reference genes in Gossypium hirsutum for accurate normalization of real-time quantitative RT-PCR dataQ30000967
Experimental validation of novel and conventional approaches to quantitative real-time PCR data analysisQ30811004
Exploring valid reference genes for gene expression studies in Brachypodium distachyon by real-time PCR.Q30851279
Patterns of MADS-box gene expression mark flower-type development in Gerbera hybrida (Asteraceae).Q33246187
An optimized grapevine RNA isolation procedure and statistical determination of reference genes for real-time RT-PCR during berry developmentQ33263600
Identification and validation of reference genes for quantitative RT-PCR normalization in wheatQ33411039
Selection of reference genes for quantitative real-time PCR expression studies in the apomictic and sexual grass Brachiaria brizanthaQ33477648
Selection of reliable reference genes for gene expression studies in peach using real-time PCRQ33484407
Validation of reference genes for quantitative RT-PCR studies of gene expression in perennial ryegrass (Lolium perenne L.)Q33525408
Defining reference genes in Oryza sativa using organ, development, biotic and abiotic transcriptome datasetsQ33547734
Selection of reference genes for quantitative gene expression normalization in flax (Linum usitatissimum L.).Q33559169
Development of 1,030 genomic SSR markers in switchgrassQ33729454
Complete switchgrass genetic maps reveal subgenome collinearity, preferential pairing and multilocus interactionsQ34007887
Quantification of mRNA using real-time reverse transcription PCR (RT-PCR): trends and problems.Q34146463
Validation of housekeeping genes as internal control for studying gene expression in rice by quantitative real-time PCR.Q34524574
Development of an integrated transcript sequence database and a gene expression atlas for gene discovery and analysis in switchgrass (Panicum virgatum L.).Q34536821
Overexpression of AtLOV1 in Switchgrass alters plant architecture, lignin content, and flowering timeQ34539963
Genetic manipulation of lignin reduces recalcitrance and improves ethanol production from switchgrassQ34621503
Switchgrass (Panicum virgatum) possesses a divergent family of cinnamoyl CoA reductases with distinct biochemical properties.Q35003646
Real-time RT-PCR normalisation; strategies and considerations.Q36091282
Identification of microRNAs and their targets in switchgrass, a model biofuel plant speciesQ39226716
A comparative analysis of the plant cellulose synthase (CesA) gene familyQ40752981
CELLULOSE BIOSYNTHESIS: Exciting Times for A Difficult Field of StudyQ44229690
Production of polyhydroxybutyrate in switchgrass, a value-added co-product in an important lignocellulosic biomass cropQ44778103
Complexes with mixed primary and secondary cellulose synthases are functional in Arabidopsis plants.Q45972529
Six new cellulose synthase genes from Eucalyptus are associated with primary and secondary cell wall biosynthesisQ48101802
Differential expression patterns of two cellulose synthase genes are associated with primary and secondary cell wall development in aspen trees.Q50746941
The lack of a systematic validation of reference genes: a serious pitfall undervalued in reverse transcription-polymerase chain reaction (RT-PCR) analysis in plants.Q51887823
The cellulose synthase superfamily.Q55034296
Switchgrass Contains Two Cinnamyl Alcohol Dehydrogenases Involved in Lignin FormationQ55113310
Three distinct rice cellulose synthase catalytic subunit genes required for cellulose synthesis in the secondary wallQ73933804
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue3
P407language of work or nameEnglishQ1860
P921main subjectPanicum virgatumQ1466543
P304page(s)e91474
P577publication date2014-03-12
P1433published inPLOS OneQ564954
P1476titleSelection and validation of reference genes for gene expression analysis in switchgrass (Panicum virgatum) using quantitative real-time RT-PCR.
P478volume9

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