Screening for Suitable Reference Genes for Quantitative Real-Time PCR in Heterosigma akashiwo (Raphidophyceae).

scientific article published on 2 July 2015

Screening for Suitable Reference Genes for Quantitative Real-Time PCR in Heterosigma akashiwo (Raphidophyceae). is …
instance of (P31):
scholarly articleQ13442814

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P819ADS bibcode2015PLoSO..1032183J
P356DOI10.1371/JOURNAL.PONE.0132183
P932PMC publication ID4489630
P698PubMed publication ID26133173
P5875ResearchGate publication ID281214245

P50authorSenjie LinQ36678842
P2093author name stringLing Li
Lingxiao Lin
Nanjing Ji
P2860cites workAccurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genesQ24534395
The validity of a reference gene is highly dependent on the experimental conditions in green alga Ulva linza.Q50505358
Reference gene selection for real-time RT-PCR in eight kinds of rat regenerating hepatic cells.Q51711031
Neurotoxins in a toxic red tide of Heterosigma akashiwo (Raphidophyceae) in Kagoshima Bay, JapanQ57255296
Coupled Effects of Light and Nitrogen Source on the Urea Cycle and Nitrogen Metabolism over a Diel Cycle in the Marine Diatom Thalassiosira pseudonanaQ58085956
Selection and validation of reference genes for qPCR analysis in the pennate diatoms Pseudo-nitzschia multistriata and P. arenysensisQ59306390
Molecular toolbox for studying diatom biology in Phaeodactylum tricornutumQ63952187
Diel Patterns of Regulation of rbcL Transcription in a Cyanobacterium and a PrymnesiophyteQ73606808
A new mathematical model for relative quantification in real-time RT-PCRQ27860781
Predator-induced fleeing behaviors in phytoplankton: a new mechanism for harmful algal bloom formation?Q28484120
Approaches to monitoring, control and management of harmful algal blooms (HABs)Q28748977
Toxic effects ofHeterosigma akashiwo do not appear to be mediated by hydrogen peroxideQ29542421
Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data setsQ29615465
The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencingQ30833097
Tandem repeats, high copy number and remarkable diel expression rhythm of form II RuBisCO in Prorocentrum donghaiense (Dinophyceae)Q31127060
Gene expression induced by copper stress in the diatom Thalassiosira pseudonanaQ33249854
Broad Salinity Tolerance as a Refuge from Predation in the Harmful Raphidophyte Alga Heterosigma akashiwo (Raphidophyceae).Q33362839
Validation of reference genes for quantitative RT-PCR studies of gene expression in perennial ryegrass (Lolium perenne L.)Q33525408
Control selection for RNA quantitationQ34007791
Reference gene selection for quantitative real-time PCR normalization in Reaumuria soongoricaQ34035487
Quantification of mRNA using real-time reverse transcription PCR (RT-PCR): trends and problems.Q34146463
Genome-based approaches to understanding phosphorus deprivation responses and PSR1 control in Chlamydomonas reinhardtiiQ34333947
Quantitative real-time RT-PCR--a perspective.Q34426536
Validation of reference genes for gene expression studies in virus-infected Nicotiana benthamiana using quantitative real-time PCR.Q34431266
Real-time PCR for mRNA quantitationQ34439106
Reference gene selection for quantitative real-time PCR normalization in Caragana intermedia under different abiotic stress conditionsQ34542374
Behavioral and physiological changes during benthic-pelagic transition in the harmful alga, Heterosigma akashiwo: potential for rapid bloom formationQ35017052
Selection and validation of reference genes for gene expression analysis in switchgrass (Panicum virgatum) using quantitative real-time RT-PCR.Q35118607
Selection of reference genes for expression analysis using quantitative real-time PCR in the pea aphid, Acyrthosiphon pisum (Harris) (Hemiptera, Aphidiae).Q35449020
Real-time RT-PCR normalisation; strategies and considerations.Q36091282
Nitric oxide as a signaling factor to upregulate the death-specific protein in a marine diatom, Skeletonema costatum, during blockage of electron flow in photosynthesisQ36958111
Coastal strains of marine Synechococcus species exhibit increased tolerance to copper shock and a distinctive transcriptional response relative to those of open-ocean strainsQ37301767
Reference genes for measuring mRNA expression.Q38010394
Validation of housekeeping genes for gene expression studies in Symbiodinium exposed to thermal and light stressQ39852461
Genome-wide identification and testing of superior reference genes for transcript normalization in ArabidopsisQ40388663
Validation of housekeeping genes for gene expression studies in an ice alga Chlamydomonas during freezing acclimationQ43015135
Evaluation and validation of internal control genes for studying gene expression in the dinoflagellate Prorocentrum minimum using real-time PCR.Q43972956
Reference gene selection for quantitative real-time PCR in Chrysanthemum subjected to biotic and abiotic stressQ44831716
Validation of reference genes for quantitative gene expression studies in Volvox carteri using real-time RT-PCR.Q45414978
Circadian synthesis of a nuclear-encoded chloroplast glyceraldehyde-3-phosphate dehydrogenase in the dinoflagellate Gonyaulax polyedra is translationally controlled.Q47951960
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue7
P407language of work or nameEnglishQ1860
P921main subjectRaphidophyteQ134928
Heterosigma akashiwoQ5747757
P304page(s)e0132183
P577publication date2015-07-02
P1433published inPLOS OneQ564954
P1476titleScreening for Suitable Reference Genes for Quantitative Real-Time PCR in Heterosigma akashiwo (Raphidophyceae).
P478volume10

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cites work (P2860)
Q92661027Genome Improvement and Core Gene Set Refinement of Fugacium kawagutii
Q36055148Phosphorus Deficiency Inhibits Cell Division But Not Growth in the Dinoflagellate Amphidinium carterae
Q36101411Selection of Suitable Reference Genes for RT-qPCR Normalization under Abiotic Stresses and Hormone Stimulation in Persimmon (Diospyros kaki Thunb).
Q38712408Type III metacaspases: calcium-dependent activity proposes new function for the p10 domain
Q50732224Verification of suitable and reliable reference genes for quantitative real-time PCR during adipogenic differentiation in porcine intramuscular stromal-vascular cells.

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