A genome-wide association study of COPD identifies a susceptibility locus on chromosome 19q13.

scientific article published on 11 November 2011

A genome-wide association study of COPD identifies a susceptibility locus on chromosome 19q13. is …
instance of (P31):
scholarly articleQ13442814
meta-analysisQ815382

External links are
P356DOI10.1093/HMG/DDR524
P932PMC publication ID3298111
P698PubMed publication ID22080838
P5875ResearchGate publication ID51789523

P50authorMateusz SiedlinskiQ58331270
Xiangyang KongQ64481933
Ruth Tal-SingerQ75469591
John E HokansonQ89513456
Emiel F M WoutersQ89553449
Blanca E HimesQ89725385
Barbara J KlandermanQ114440518
William MacNeeQ38326286
Jørgen VestboQ41838693
Augusto A LitonjuaQ42572197
P2093author name stringDavid Sparrow
David A Lomas
Stephen Rennard
Christoph Lange
Wayne H Anderson
Barry J Make
Bartolome Celli
Craig P Hersh
Edwin K Silverman
Elizabeth A Regan
Emily S Wan
James D Crapo
Michael H Cho
Peter J Castaldi
Terri H Beaty
Amund Gulsvik
COPDGene Investigators
ECLIPSE Investigators
Per Bakke
Harvey O Coxson
Peter M A Calverley
Jody S Sylvia
John P Ziniti
Sreekumar G Pillai
Jacqueline B Hetmanski
Courtney Crim
Alvar Agusti
Dawn L Demeo
Tanda Murray
Julie C Yates
Lisa D Edwards
ICGN Investigators
P2860cites workPopulation structure and eigenanalysisQ21145248
Global Strategy for the Diagnosis, Management, and Prevention of Chronic Obstructive Pulmonary DiseaseQ22299313
Genome-wide meta-analyses identify multiple loci associated with smoking behaviorQ24597886
Twelve type 2 diabetes susceptibility loci identified through large-scale association analysisQ24609915
A map of human genome variation from population-scale sequencingQ24617794
Genome-wide association study identifies five loci associated with lung functionQ24629653
Meta-analyses of genome-wide association studies identify multiple loci associated with pulmonary functionQ24633262
MaCH: using sequence and genotype data to estimate haplotypes and unobserved genotypesQ24635938
A second generation human haplotype map of over 3.1 million SNPsQ24651939
Disruption of the gene encoding the latent transforming growth factor-beta binding protein 4 (LTBP-4) causes abnormal lung development, cardiomyopathy, and colorectal cancerQ24671034
PLINK: a tool set for whole-genome association and population-based linkage analysesQ24677407
Principal components analysis corrects for stratification in genome-wide association studiesQ27860975
A randomized trial comparing lung-volume-reduction surgery with medical therapy for severe emphysemaQ28205534
Common polygenic variation contributes to risk of schizophrenia and bipolar disorderQ28250609
Multiple independent loci at chromosome 15q25.1 affect smoking quantity: a meta-analysis and comparison with lung cancer and COPD.Q28290169
Global and gene-specific translational regulation in rat lung developmentQ28579194
Individual and cumulative effects of GWAS susceptibility loci in lung cancer: associations after sub-phenotyping for COPDQ28743099
Practical aspects of imputation-driven meta-analysis of genome-wide association studiesQ28749837
Large-scale association analysis identifies 13 new susceptibility loci for coronary artery diseaseQ29417023
Genome-wide association study of smoking behaviours in patients with COPDQ29417072
Genomic control for association studiesQ29547213
The future of genetic studies of complex human diseasesQ29547215
METAL: fast and efficient meta-analysis of genomewide association scansQ29547217
GenABEL: an R library for genome-wide association analysisQ29614587
LocusZoom: regional visualization of genome-wide association scan resultsQ29614868
SNAP: a web-based tool for identification and annotation of proxy SNPs using HapMapQ29614907
International variation in the prevalence of COPD (the BOLD Study): a population-based prevalence studyQ29614971
Misexpression of MIA disrupts lung morphogenesis and causes neonatal death.Q30481818
Deaths: preliminary data for 2008.Q30839405
Duplications and defects in the CYP2A6 gene: identification, genotyping, and in vivo effects on smokingQ31440486
Family-based versus unrelated case-control designs for genetic associationsQ33253242
A genome-wide association study in chronic obstructive pulmonary disease (COPD): identification of two major susceptibility loci.Q33419815
A genome-wide association study of pulmonary function measures in the Framingham Heart StudyQ33419839
The COPD genetic association compendium: a comprehensive online database of COPD genetic associationsQ33559787
Genome-wide linkage analysis of severe, early-onset chronic obstructive pulmonary disease: airflow obstruction and chronic bronchitis phenotypes.Q51722853
Case-control studies on risk factors for chronic obstructive pulmonary disease: how does the sampling of the cases and controls affect the results?Q51816387
Exhaustive allelic transmission disequilibrium tests as a new approach to genome-wide association studies.Q51985806
Hypoxia-inducible factors in the first trimester human lung.Q51998492
Genetic epidemiology of severe, early-onset chronic obstructive pulmonary disease. Risk to relatives for airflow obstruction and chronic bronchitis.Q52241091
Airway wall thickening and emphysema show independent familial aggregation in chronic obstructive pulmonary disease.Q53409072
The SERPINE2 gene is associated with chronic obstructive pulmonary disease in two large populations.Q53572756
Evaluating the heritability explained by known susceptibility variants: a survey of ten complex diseasesQ57233959
Genome-wide linkage analysis of bronchodilator responsiveness and post-bronchodilator spirometric phenotypes in chronic obstructive pulmonary diseaseQ57253805
Evaluation of COPD Longitudinally to Identify Predictive Surrogate End-points (ECLIPSE)Q57955885
Characterization of CYP2A6 involved in 3'-hydroxylation of cotinine in human liver microsomesQ71072314
The Familial Occurrence of Chronic Obstructive Pulmonary DiseaseQ72594592
Siblings of patients with severe chronic obstructive pulmonary disease have a significant risk of airflow obstructionQ77158107
Effects of randomized assignment to a smoking cessation intervention and changes in smoking habits on respiratory symptoms in smokers with early chronic obstructive pulmonary disease: the Lung Health StudyQ77391582
Does genetic testing result in behavioral health change? Changes in smoking behavior following testing for alpha-1 antitrypsin deficiencyQ79753562
Chromosome 4q31 locus in COPD is also associated with lung cancerQ82674649
Variants in FAM13A are associated with chronic obstructive pulmonary diseaseQ33687879
The role of IREB2 and transforming growth factor beta-1 genetic variants in COPD: a replication case-control studyQ33820228
A novel CYP2A6 allele (CYP2A6*35) resulting in an amino-acid substitution (Asn438Tyr) is associated with lower CYP2A6 activity in vivoQ34068238
Genetic epidemiology of COPD (COPDGene) study designQ34074731
Sequence variants at CHRNB3-CHRNA6 and CYP2A6 affect smoking behaviorQ34112069
Effects of smoking intervention and the use of an inhaled anticholinergic bronchodilator on the rate of decline of FEV1. The Lung Health StudyQ34326181
The effects of a smoking cessation intervention on 14.5-year mortality: a randomized clinical trialQ34394365
Metabolism and disposition kinetics of nicotineQ34398241
Developing COPD: a 25 year follow up study of the general populationQ34577485
Quantitative relationships between cigarette smoking and ventilatory functionQ34730271
Mediating effects of smoking and chronic obstructive pulmonary disease on the relation between the CHRNA5-A3 genetic locus and lung cancer riskQ34778144
Opportunities and challenges in the genetics of COPD 2010: an International COPD Genetics Conference reportQ34854354
The contribution of common CYP2A6 alleles to variation in nicotine metabolism among European-AmericansQ35048184
Random-effects model aimed at discovering associations in meta-analysis of genome-wide association studiesQ35136958
Smokers with the CHRNA lung cancer-associated variants are exposed to higher levels of nicotine equivalents and a carcinogenic tobacco-specific nitrosamineQ36983085
Genetic association analysis of functional impairment in chronic obstructive pulmonary diseaseQ37144319
Attempted replication of reported chronic obstructive pulmonary disease candidate gene associationsQ37273821
A functional mutation in the terminal exon of elastin in severe, early-onset chronic obstructive pulmonary diseaseQ37273940
Integration of genomic and genetic approaches implicates IREB2 as a COPD susceptibility geneQ37373901
Mutations in LTBP4 cause a syndrome of impaired pulmonary, gastrointestinal, genitourinary, musculoskeletal, and dermal developmentQ37417872
Hedgehog-interacting protein is a COPD susceptibility gene: the Rotterdam StudyQ38377093
Is calculating pack-years retrospectively a valid method to estimate life-time tobacco smoking? A comparison between prospectively calculated pack-years and retrospectively calculated pack-yearsQ40667097
PBAT: tools for family-based association studiesQ42930203
The 15q24/25 susceptibility variant for lung cancer and chronic obstructive pulmonary disease is associated with emphysemaQ43223136
Novel and established CYP2A6 alleles impair in vivo nicotine metabolism in a population of Black African descent.Q43597583
Smoking, serum lipids, blood pressure, and sex differences in myocardial infarction. A 12-year follow-up of the Finnmark StudyQ44171249
Genetic variation of CYP2A6, smoking, and risk of cancer.Q44222316
The natural history of chronic airflow obstruction revisited: an analysis of the Framingham offspring cohortQ44934998
Lung cancer gene associated with COPD: triple whammy or possible confounding effect?Q46269161
Genetic polymorphisms in 15q25 and 19q13 loci, cotinine levels, and risk of lung cancer in EPIC.Q47125986
Genetic susceptibility testing in smoking-cessation treatment: one-year outcomes of a randomized trial.Q48732906
P4510describes a project that usesgenome-wide association studyQ1098876
P433issue4
P921main subjectgenome-wide association studyQ1098876
susceptibility locusQ62091149
P304page(s)947-957
P577publication date2011-11-11
P1433published inHuman Molecular GeneticsQ2720965
P1476titleA genome-wide association study of COPD identifies a susceptibility locus on chromosome 19q13.
P478volume21

Reverse relations

cites work (P2860)
Q94561716A Between Ethnicities Comparison of Chronic Obstructive Pulmonary Disease Genetic Risk
Q36128611A Genome-Wide Association Study of Emphysema and Airway Quantitative Imaging Phenotypes
Q36844920A genome-wide analysis of the response to inhaled β2-agonists in chronic obstructive pulmonary disease
Q35860362A genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry
Q36089387A multiancestry study identifies novel genetic associations with CHRNA5 methylation in human brain and risk of nicotine dependence
Q47564198A novel method to test associations between a weighted combination of phenotypes and genetic variants.
Q34987218Airway basal cells. The "smoking gun" of chronic obstructive pulmonary disease
Q47319993Airway morphology and inspiratory flow features in the early stages of Chronic Obstructive Pulmonary Disease.
Q57909754Alpha-1 Antitrypsin PiMZ Genotype Is Associated with Chronic Obstructive Pulmonary Disease in Two Racial Groups
Q38066244An omics strategy for discovering pulmonary biomarkers potentially relevant to the evaluation of tobacco products
Q91582055Analysis of genetically driven alternative splicing identifies FBXO38 as a novel COPD susceptibility gene
Q48187452Association between Genetic Variations of MERTK and Chronic Obstructive Pulmonary Disease in Koreans.
Q52599632Association of Time to First Morning Cigarette and Chronic Obstructive Pulmonary Disease Measured by Spirometry in Current Smokers.
Q51580410Association of multiple genetic variants with chronic obstructive pulmonary disease susceptibility in Hainan region.
Q37581425Association of nsv823469 copy number loss with decreased risk of chronic obstructive pulmonary disease and pulmonary function in Chinese
Q40114829Beyond GWAS in COPD: probing the landscape between gene-set associations, genome-wide associations and protein-protein interaction networks
Q34840130Bridging the clinical gaps: genetic, epigenetic and transcriptomic biomarkers for the early detection of lung cancer in the post-National Lung Screening Trial era
Q47676097COPD GWAS variant at 19q13.2 in relation with DNA methylation and gene expression
Q58778491COPD is accompanied by co-ordinated transcriptional perturbation in the quadriceps affecting the mitochondria and extracellular matrix
Q26777324Candidate genes for COPD: current evidence and research
Q38636068Chronic Obstructive Pulmonary Disease Genetics: A Review of the Past and a Look Into the Future
Q53186860Chronic Obstructive Pulmonary Disease Meta Genome-Wide Association Studies. New Insights into the Genetics of Chronic Obstructive Pulmonary Disease.
Q27027955Chronic obstructive pulmonary disease
Q37731708Cluster analysis in the COPDGene study identifies subtypes of smokers with distinct patterns of airway disease and emphysema
Q34471260Common genetic variants associated with resting oxygenation in chronic obstructive pulmonary disease
Q26864326Complex genetics of pulmonary diseases: lessons from genome-wide association studies and next-generation sequencing
Q33799715DNA methylation is globally disrupted and associated with expression changes in chronic obstructive pulmonary disease small airways
Q41665058DNA methylation profiling in human lung tissue identifies genes associated with COPD.
Q57757087DNAH5 is associated with total lung capacity in chronic obstructive pulmonary disease
Q92029835DSP variants may be associated with longitudinal change in quantitative emphysema
Q37396382Differential DNA methylation marks and gene comethylation of COPD in African-Americans with COPD exacerbations
Q34418291Disease risk factors identified through shared genetic architecture and electronic medical records
Q36691602Dissecting direct and indirect genetic effects on chronic obstructive pulmonary disease (COPD) susceptibility.
Q30361777Dissecting the genetics of chronic mucus hypersecretion in smokers with and without COPD.
Q26865324Early events in the pathogenesis of chronic obstructive pulmonary disease. Smoking-induced reprogramming of airway epithelial basal progenitor cells
Q34989644Elevated serum iron is a potent biomarker for spirometric resistance to cigarette smoke among Japanese males: the Takahata study
Q36389310Emerging genetics of COPD.
Q50044127Ensemble genomic analysis in human lung tissue identifies novel genes for chronic obstructive pulmonary disease.
Q40157543Epigenome-wide association study of chronic obstructive pulmonary disease and lung function in Koreans
Q98772259Epithelial cell-specific loss of function of Miz1 causes a spontaneous COPD-like phenotype and up-regulates Ace2 expression in mice
Q37125510Exome Array Analysis Identifies a Common Variant in IL27 Associated with Chronic Obstructive Pulmonary Disease
Q37013121Exome Sequencing Analysis in Severe, Early-Onset Chronic Obstructive Pulmonary Disease
Q50420061Extracellular matrix in lung development, homeostasis and disease.
Q51075726Extracellular matrix remodeling genes polymorphisms and risk of chronic bronchitis and recurrent pneumonia in children.
Q38757264Extreme Trait Whole-Genome Sequencing Identifies PTPRO as a Novel Candidate Gene in Emphysema with Severe Airflow Obstruction.
Q37695214Functional interactors of three genome-wide association study genes are differentially expressed in severe chronic obstructive pulmonary disease lung tissue
Q36862051Gene expression analysis uncovers novel hedgehog interacting protein (HHIP) effects in human bronchial epithelial cells
Q38974166Genetic Association and Risk Scores in a Chronic Obstructive Pulmonary Disease Meta-analysis of 16,707 Subjects.
Q47171958Genetic Pleiotropy between Nicotine Dependence and Respiratory Outcomes
Q37166853Genetic association between human chitinases and lung function in COPD
Q36724956Genetic control of gene expression at novel and established chronic obstructive pulmonary disease loci
Q30274832Genetic loci associated with chronic obstructive pulmonary disease overlap with loci for lung function and pulmonary fibrosis
Q36229721Genetic polymorphism of heme oxygenase 1 promoter in the occurrence and severity of chronic obstructive pulmonary disease: a meta-analysis
Q34342451Genetic polymorphisms and associated susceptibility to asthma
Q51700279Genetic regulation of gene expression in the lung identifies CST3 and CD22 as potential causal genes for airflow obstruction.
Q100526128Genetic regulation of gene expression of MIF family members in lung tissue
Q45074419Genetic studies as a tool for identifying novel potential targets for treatment of COPD.
Q34309196Genetic susceptibility for chronic bronchitis in chronic obstructive pulmonary disease
Q24606717Genetic susceptibility to lung cancer and co-morbidities
Q90211681Genetic underpinnings of lung function and COPD
Q34847876Genetic variation in HTR4 and lung function: GWAS follow-up in mouse
Q89454591Genome-wide MicroRNA Expression Profiles in COPD: Early Predictors for Cancer Development
Q29416995Genome-wide association analysis of blood biomarkers in chronic obstructive pulmonary disease
Q34425983Genome-wide association identifies regulatory Loci associated with distinct local histogram emphysema patterns
Q30420166Genome-wide association studies identify CHRNA5/3 and HTR4 in the development of airflow obstruction
Q30408059Genome-wide study of percent emphysema on computed tomography in the general population. The Multi-Ethnic Study of Atherosclerosis Lung/SNP Health Association Resource Study
Q88324448Genotype imputation performance of three reference panels using African ancestry individuals
Q36155424Hemizygous Deletion on Chromosome 3p26.1 Is Associated with Heavy Smoking among African American Subjects in the COPDGene Study
Q37304387Heritability of chronic obstructive pulmonary disease and related phenotypes in smokers
Q35207735IREB2 and GALC are associated with pulmonary artery enlargement in chronic obstructive pulmonary disease
Q86573040Identification of FAM13A gene associated with the ratio of FEV1 to FVC in Korean population by genome-wide association studies including gene-environment interactions
Q36372888Identifying a Deletion Affecting Total Lung Capacity Among Subjects in the COPDGene Study Cohort
Q59129180Integration of Molecular Interactome and Targeted Interaction Analysis to Identify a COPD Disease Network Module
Q48273700Integrative Genomics of Emphysema-Associated Genes: Are We Closer to Identifying the Genetic Determinants of Lung Function?
Q30883307Integrative analysis of DNA methylation and gene expression data identifies EPAS1 as a key regulator of COPD.
Q52642397Integrative genomics identifies new genes associated with severe COPD and emphysema.
Q34232677Integrative genomics of chronic obstructive pulmonary disease.
Q37334535Integrative omics approach identifies interleukin-16 as a biomarker of emphysema
Q38169066Lessons from ECLIPSE: a review of COPD biomarkers
Q52651993Leveraging lung tissue transcriptome to uncover candidate causal genes in COPD genetic associations.
Q64119446Limited overlap in significant hits between genome-wide association studies on two airflow obstruction definitions in the same population
Q90383985Low miR-150-5p and miR-320b Expression Predicts Reduced Survival of COPD Patients
Q50184676Matrix metalloproteinases in emphysema.
Q36547252Mitochondrial iron chelation ameliorates cigarette smoke-induced bronchitis and emphysema in mice
Q38243943Moving beyond genetics: is FAM13A a major biological contributor in lung physiology and chronic lung diseases?
Q91908132New genetic signals for lung function highlight pathways and chronic obstructive pulmonary disease associations across multiple ancestries
Q41060193Nicotine dependence is associated with functional variation in FMO3, an enzyme that metabolizes nicotine in the brain
Q64109060Nicotine oxidation by genetic variants of CYP2B6 and in human brain microsomes
Q37482173On the simultaneous association analysis of large genomic regions: a massive multi-locus association test
Q37654985One thousand genomes imputation in the National Cancer Institute Breast and Prostate Cancer Cohort Consortium aggressive prostate cancer genome-wide association study
Q74441560Perspective: How can genetics help?
Q38169240Phenotypes and disease characterization in chronic obstructive pulmonary disease. Toward the extinction of phenotypes?
Q34619853Phenotypic and genetic heterogeneity among subjects with mild airflow obstruction in COPDGene
Q39226768Phenotyping Before Starting Treatment in COPD?
Q38063326Phenotyping the heterogeneity of chronic obstructive pulmonary disease
Q30826972Post-GWAS Prioritization Through Data Integration Provides Novel Insights on Chronic Obstructive Pulmonary Disease.
Q34400233Protection genes in nucleus accumbens shell affect vulnerability to nicotine self-administration across isogenic strains of adolescent rat
Q64086915RNA-sequencing across three matched tissues reveals shared and tissue-specific gene expression and pathway signatures of COPD
Q34922245Refining susceptibility loci of chronic obstructive pulmonary disease with lung eqtls
Q37176968Relationship between plasma fibrinogen levels and pulmonary function in the japanese population: the Takahata study
Q37629306Reprogramming of COPD lung fibroblasts through formation of induced pluripotent stem cells
Q54257597Research Highlights: Highlights from the latest articles in chronic obstructive pulmonary disease genetics.
Q29416987Risk loci for chronic obstructive pulmonary disease: a genome-wide association study and meta-analysis
Q23910387Role of genetic factors in pulmonary disease susceptibility
Q28387428SERPINA1 PiZ and PiS heterozygotes and lung function decline in the SAPALDIA cohort
Q36310868Screening for interaction effects in gene expression data
Q40472286Sex-Based Genetic Association Study Identifies CELSR1 as a Possible Chronic Obstructive Pulmonary Disease Risk Locus among Women.
Q36392496Sixteen new lung function signals identified through 1000 Genomes Project reference panel imputation
Q37549358Smoking dysregulates the human airway basal cell transcriptome at COPD risk locus 19q13.2.
Q33833861Smoking status and gene susceptibility play important roles in the development of chronic obstructive pulmonary disease and lung function decline: A population-based prospective study
Q35143045Susceptibility to chronic mucus hypersecretion, a genome wide association study
Q41679073The Functional Copy Number Variation-67048 in WWOX Contributes to Increased Risk of COPD in Southern and Eastern Chinese
Q38239649The IRP/IRE system in vivo: insights from mouse models
Q50050250The PHD1 oxygen sensor in health and disease.
Q37573962The contribution of common UGT2B10 and CYP2A6 alleles to variation in nicotine glucuronidation among European Americans
Q34834259The effects of Gamijinhae-tang on elastase/lipopolysaccharide-induced lung inflammation in an animal model of acute lung injury
Q36605892The role of WWOX polymorphisms on COPD susceptibility and pulmonary function traits in Chinese: a case-control study and family-based analysis
Q51559655Time to First Cigarette, a Proxy of Nicotine Dependence, Increases the Risk of Pulmonary Impairment, Independently of Current and Lifetime Smoking Behavior.
Q104257661Transferability Of Ancestry-Specific And Cross-Ancestry CYP2A6 Activity Genetic Risk Scores In African And European Populations
Q26824935Updates on the COPD gene list
Q38215807Using pulmonary imaging to move chronic obstructive pulmonary disease beyond FEV1.
Q35914781Variants in multiple genes polymorphism association analysis of COPD in the Chinese Li population
Q37406432Variants in two adjacent genes, EGLN2 and CYP2A6, influence smoking behavior related to disease risk via different mechanisms
Q37690237Vascular transcriptome profiling identifies Sphingosine kinase 1 as a modulator of angiotensin II-induced vascular dysfunction.
Q47801457What do polymorphisms tell us about the mechanisms of COPD?
Q56355677Whole Genome Sequencing in Severe Chronic Obstructive Pulmonary Disease
Q36443195Whole exome sequencing identifies novel candidate genes that modify chronic obstructive pulmonary disease susceptibility
Q100558998Whole genome sequence analysis of pulmonary function and COPD in 19,996 multi-ethnic participants

Search more.