| scholarly article | Q13442814 |
| P50 | author | Leonardo da Costa Sousa | Q46573485 |
| Mingjie Jin | Q59679055 | ||
| Jennifer L. Reed | Q61446134 | ||
| James J Ellinger | Q82214851 | ||
| Patricia J Kiley | Q92205828 | ||
| P2093 | author name string | Alan Higbee | |
| Yaoping Zhang | |||
| Venkatesh Balan | |||
| Wesley D Marner | |||
| Michael S Schwalbach | |||
| Jeffrey A Grass | |||
| Robert Landick | |||
| Bruce Dale | |||
| David H Keating | |||
| Mary Tremaine | |||
| William Bothfeld | |||
| Cameron Cotten | |||
| P2860 | cites work | An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR) | Q21194867 |
| Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection | Q22122301 | ||
| The CyberCell Database (CCDB): a comprehensive, self-updating, relational database to coordinate and facilitate in silico modeling of Escherichia coli | Q24599491 | ||
| EcoCyc: a comprehensive database of Escherichia coli biology | Q24612081 | ||
| The respiratory chains of Escherichia coli | Q24634578 | ||
| The zntA gene of Escherichia coli encodes a Zn(II)-translocating P-type ATPase | Q24648949 | ||
| The ars operon of Escherichia coli confers arsenical and antimonial resistance | Q24674895 | ||
| The complete genome sequence of Escherichia coli K-12 | Q27860542 | ||
| A comparison of normalization methods for high density oligonucleotide array data based on variance and bias | Q27860710 | ||
| NMRPipe: a multidimensional spectral processing system based on UNIX pipes | Q27860859 | ||
| Exploration, normalization, and summaries of high density oligonucleotide array probe level data | Q27861098 | ||
| Deletion of methylglyoxal synthase gene (mgsA) increased sugar co-metabolism in ethanol-producing Escherichia coli | Q28245732 | ||
| Cellulosic hydrolysate toxicity and tolerance mechanisms in Escherichia coli | Q28750332 | ||
| An efficient recombination system for chromosome engineering in Escherichia coli | Q29615038 | ||
| Absolute metabolite concentrations and implied enzyme active site occupancy in Escherichia coli | Q29615316 | ||
| Culture medium for enterobacteria | Q29616466 | ||
| Analysis of a complete library of putative drug transporter genes in Escherichia coli | Q30724303 | ||
| Lack of protective osmolytes limits final cell density and volumetric productivity of ethanologenic Escherichia coli KO11 during xylose fermentation | Q30928551 | ||
| TorT, a member of a new periplasmic binding protein family, triggers induction of the Tor respiratory system upon trimethylamine N-oxide electron-acceptor binding in Escherichia coli | Q31066812 | ||
| Enhanced trehalose production improves growth of Escherichia coli under osmotic stress | Q33218346 | ||
| Genes restoring redox balance in fermentation-deficient E. coli NZN111. | Q33486246 | ||
| Acetate and formate stress: opposite responses in the proteome of Escherichia coli | Q33555165 | ||
| rNMR: open source software for identifying and quantifying metabolites in NMR spectra | Q33557237 | ||
| A broad-specificity multidrug efflux pump requiring a pair of homologous SMR-type proteins | Q33789495 | ||
| Metabolic engineering for production of biorenewable fuels and chemicals: contributions of synthetic biology | Q33803311 | ||
| The ion coupling and organic substrate specificities of osmoregulatory transporter ProP in Escherichia coli. | Q33870915 | ||
| Using DNA microarrays to assay part function | Q33907606 | ||
| Paradigm for industrial strain improvement identifies sodium acetate tolerance loci in Zymomonas mobilis and Saccharomyces cerevisiae | Q33934882 | ||
| Comparing the fermentation performance of Escherichia coli KO11, Saccharomyces cerevisiae 424A(LNH-ST) and Zymomonas mobilis AX101 for cellulosic ethanol production | Q33968679 | ||
| Global analysis of Escherichia coli gene expression during the acetate-induced acid tolerance response | Q33995875 | ||
| Metabolic efficiency and amino acid composition in the proteomes of Escherichia coli and Bacillus subtilis | Q34019786 | ||
| Requirement of the type II secretion system for utilization of cellulosic substrates by Cellvibrio japonicus | Q34045849 | ||
| Biofuel production in Escherichia coli: the role of metabolic engineering and synthetic biology | Q34097728 | ||
| EmrR is a negative regulator of the Escherichia coli multidrug resistance pump EmrAB. | Q35584121 | ||
| The evolution of metabolic networks of E. coli | Q35589090 | ||
| Genetic improvement of Escherichia coli for ethanol production: chromosomal integration of Zymomonas mobilis genes encoding pyruvate decarboxylase and alcohol dehydrogenase II. | Q35688539 | ||
| Genetic engineering of ethanol production in Escherichia coli | Q36090762 | ||
| Genetic analysis of the proBA genes of Salmonella typhimurium: physical and genetic analyses of the cloned proB+ A+ genes of Escherichia coli and of a mutant allele that confers proline overproduction and enhanced osmotolerance. | Q36333584 | ||
| Ammonia acquisition in enteric bacteria: physiological role of the ammonium/methylammonium transport B (AmtB) protein | Q36506751 | ||
| An Escherichia coli chromosomal ars operon homolog is functional in arsenic detoxification and is conserved in gram-negative bacteria | Q36700722 | ||
| The MarR repressor of the multiple antibiotic resistance (mar) operon in Escherichia coli: prototypic member of a family of bacterial regulatory proteins involved in sensing phenolic compounds | Q36786208 | ||
| Development of ethanologenic bacteria | Q36897089 | ||
| Cellulosic ethanol production from AFEX-treated corn stover using Saccharomyces cerevisiae 424A(LNH-ST). | Q37083607 | ||
| Anaerobic respiration in engineered Escherichia coli with an internal electron acceptor to produce fuel ethanol | Q37124167 | ||
| An integrated network approach identifies the isobutanol response network of Escherichia coli | Q37262268 | ||
| Global discovery of adaptive mutations | Q37388928 | ||
| Lignocellulosic biomass pretreatment using AFEX. | Q37600732 | ||
| Expression of a Butyrivibrio fibrisolvens E14 gene (cinB) encoding an enzyme with cinnamoyl ester hydrolase activity is negatively regulated by the product of an adjacent gene (cinR). | Q38347134 | ||
| Metabolome remodeling during the acidogenic-solventogenic transition in Clostridium acetobutylicum | Q38954946 | ||
| Characterization of the Escherichia coli AaeAB efflux pump: a metabolic relief valve? | Q39374955 | ||
| Regulation of arabinose and xylose metabolism in Escherichia coli | Q39410152 | ||
| Protons, osmolytes, and fitness of internal milieu for protein function | Q39503878 | ||
| Alteration of the repressor activity of MarR, the negative regulator of the Escherichia coli marRAB locus, by multiple chemicals in vitro. | Q39547481 | ||
| Perturbation of anion balance during inhibition of growth of Escherichia coli by weak acids | Q39564551 | ||
| The putative response regulator BaeR stimulates multidrug resistance of Escherichia coli via a novel multidrug exporter system, MdtABC | Q39679800 | ||
| Molecular analysis of the copper-transporting efflux system CusCFBA of Escherichia coli | Q39775113 | ||
| Stoichiometric flux balance models quantitatively predict growth and metabolic by-product secretion in wild-type Escherichia coli W3110. | Q39916365 | ||
| Biochemical and genetic characterization of osmoregulatory trehalose synthesis in Escherichia coli | Q39953520 | ||
| Selection, mapping, and characterization of osmoregulatory mutants of Escherichia coli blocked in the choline-glycine betaine pathway | Q39965020 | ||
| Effects of alcohols on micro-organisms | Q40203151 | ||
| Pyruvate formate lyase and acetate kinase are essential for anaerobic growth of Escherichia coli on xylose | Q40271310 | ||
| Newly identified genetic variations in common Escherichia coli MG1655 stock cultures | Q40346767 | ||
| Adaptation of Escherichia coli to high osmolarity environments: osmoregulation of the high-affinity glycine betaine transport system proU. | Q40661223 | ||
| Escherichia coli physiology in Luria-Bertani broth | Q41880538 | ||
| Furfural inhibits growth by limiting sulfur assimilation in ethanologenic Escherichia coli strain LY180. | Q41951429 | ||
| Regulatory and metabolic rewiring during laboratory evolution of ethanol tolerance in E. coli. | Q42619151 | ||
| Multifaceted characterization of cell wall decomposition products formed during ammonia fiber expansion (AFEX) and dilute acid based pretreatments. | Q42991401 | ||
| Genome-derived minimal metabolic models for Escherichia coli MG1655 with estimated in vivo respiratory ATP stoichiometry | Q43053148 | ||
| The comparison of aluminium effects and its uptake by Escherichia coli in different media. | Q44049607 | ||
| Gene array-based identification of changes that contribute to ethanol tolerance in ethanologenic Escherichia coli: comparison of KO11 (parent) to LY01 (resistant mutant). | Q44390369 | ||
| Ammonia fiber explosion treatment of corn stover | Q44822268 | ||
| Effect of binary combinations of selected toxic compounds on growth and fermentation of Kluyveromyces marxianus | Q44920623 | ||
| Butanol tolerance in a selection of microorganisms | Q46194322 | ||
| Re-engineering Escherichia coli for ethanol production | Q46388009 | ||
| Nomenclature for the description of human sequence variations | Q48738393 | ||
| Ethanolic fermentation of hydrolysates from ammonia fiber expansion (AFEX) treated corn stover and distillers grain without detoxification and external nutrient supplementation. | Q50932670 | ||
| Combined effect of betaine and trehalose on osmotic tolerance of Escherichia coli in mineral salts medium. | Q51096736 | ||
| Optimization of the ammonia fiber explosion (AFEX) treatment parameters for enzymatic hydrolysis of corn stover. | Q51369069 | ||
| Simplified process for ethanol production from sugarcane bagasse using hydrolysate-resistant Escherichia coli strain MM160 | Q54375044 | ||
| Effect of primary degradation-reaction products from Ammonia Fiber Expansion (AFEX)-treated corn stover on the growth and fermentation of Escherichia coli KO11. | Q54382663 | ||
| Physiological role of the GlnK signal transduction protein of Escherichia coli: survival of nitrogen starvation. | Q54537148 | ||
| Improved strains of recombinant Escherichia coli for ethanol production from sugar mixtures. | Q54614490 | ||
| Differential Molecular Responses of Rice and Wheat Coleoptiles to Anoxia Reveal Novel Metabolic Adaptations in Amino Acid Metabolism for Tissue Tolerance | Q58064235 | ||
| Purification and characterization of a glycine betaine binding protein from Escherichia coli | Q68182111 | ||
| Alanine protects rabbit proximal tubules against anoxic injury in vitro | Q68765211 | ||
| Effect of alcohol compounds found in hemicellulose hydrolysate on the growth and fermentation of ethanologenic Escherichia coli | Q73746836 | ||
| Isolation and characterization of ethanol-tolerant mutants of Escherichia coli KO11 for fuel ethanol production | Q74610680 | ||
| Effect of selected aldehydes on the growth and fermentation of ethanologenic Escherichia coli | Q78107524 | ||
| Genetic analysis of the proBA genes of Salmonella typhimurium: physical and genetic analyses of the cloned proB+ A+ genes of Escherichia coli and of a mutant allele that confers proline overproduction and enhanced osmotolerance. | Q105137767 | ||
| P433 | issue | 9 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | Escherichia coli | Q25419 |
| P304 | page(s) | 3442-3457 | |
| P577 | publication date | 2012-03-02 | |
| P1433 | published in | Applied and Environmental Microbiology | Q4781593 |
| P1476 | title | Complex physiology and compound stress responses during fermentation of alkali-pretreated corn stover hydrolysate by an Escherichia coli ethanologen | |
| P478 | volume | 78 |
| Q92595507 | Adaptive Responses of Shewanella decolorationis to Toxic Organic Extracellular Electron Acceptor Azo Dyes in Anaerobic Respiration |
| Q34042958 | Aromatic inhibitors derived from ammonia-pretreated lignocellulose hinder bacterial ethanologenesis by activating regulatory circuits controlling inhibitor efflux and detoxification. |
| Q36292927 | Controlling microbial contamination during hydrolysis of AFEX-pretreated corn stover and switchgrass: effects on hydrolysate composition, microbial response and fermentation |
| Q33835213 | Correcting direct effects of ethanol on translation and transcription machinery confers ethanol tolerance in bacteria |
| Q28657751 | Death by a thousand cuts: the challenges and diverse landscape of lignocellulosic hydrolysate inhibitors |
| Q36163710 | Directed Evolution Reveals Unexpected Epistatic Interactions That Alter Metabolic Regulation and Enable Anaerobic Xylose Use by Saccharomyces cerevisiae. |
| Q34775204 | Dissecting a complex chemical stress: chemogenomic profiling of plant hydrolysates |
| Q38948246 | Effects of copper on CHO cells: cellular requirements and product quality considerations |
| Q28542984 | Engineering and two-stage evolution of a lignocellulosic hydrolysate-tolerant Saccharomyces cerevisiae strain for anaerobic fermentation of xylose from AFEX pretreated corn stover |
| Q50488955 | Global transcriptome analysis of Escherichia coli exposed to immobilized anthraquinone-2-sulfonate and azo dye under anaerobic conditions. |
| Q36329110 | Hybridization and adaptive evolution of diverse Saccharomyces species for cellulosic biofuel production |
| Q55099848 | In silico exploration of Red Sea Bacillus genomes for natural product biosynthetic gene clusters. |
| Q57788170 | In silico model-guided identification of transcriptional regulator targets for efficient strain design |
| Q48196638 | Lactobacillus casei as a biocatalyst for biofuel production. |
| Q37287103 | Leveraging Genetic-Background Effects in Saccharomyces cerevisiae To Improve Lignocellulosic Hydrolysate Tolerance |
| Q37284929 | Manipulation of culture conditions alters lipid content and fatty acid profiles of a wide variety of known and new oleaginous yeast species. |
| Q41634337 | Manipulation of the anoxic metabolism in Escherichia coli by ArcB deletion variants in the ArcBA two-component system |
| Q28595441 | Metabolism of Multiple Aromatic Compounds in Corn Stover Hydrolysate by Rhodopseudomonas palustris |
| Q91583937 | Multiomic Fermentation Using Chemically Defined Synthetic Hydrolyzates Revealed Multiple Effects of Lignocellulose-Derived Inhibitors on Cell Physiology and Xylose Utilization in Zymomonas mobilis |
| Q33721334 | Mutations That Alter the Bacterial Cell Envelope Increase Lipid Production. |
| Q90806783 | OptSSeq explores enzyme expression and function landscapes to maximize isobutanol production rate |
| Q36000552 | Phenolic Amides Are Potent Inhibitors of De Novo Nucleotide Biosynthesis |
| Q28602751 | Production of Palmitoleic and Linoleic Acid in Oleaginous and Nonoleaginous Yeast Biomass |
| Q37545723 | Revealing the genetic basis of natural bacterial phenotypic divergence. |
| Q64109188 | Rewired cellular signaling coordinates sugar and hypoxic responses for anaerobic xylose fermentation in yeast |
| Q35069337 | Stress responses of the industrial workhorse Bacillus licheniformis to osmotic challenges |
| Q52654217 | Systems biology defines the biological significance of redox-active proteins during cellulose degradation in an aerobic bacterium. |
| Q57028611 | The DOE Bioenergy Research Centers: History, Operations, and Scientific Output |
| Q35022310 | The bacterial response regulator ArcA uses a diverse binding site architecture to regulate carbon oxidation globally |
| Q52653987 | Water-soluble phenolic compounds produced from extractive ammonia pretreatment exerted binary inhibitory effects on yeast fermentation using synthetic hydrolysate. |
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