| human | Q5 |
| P496 | ORCID iD | 0000-0001-7854-6220 |
| P1053 | ResearcherID | E-5137-2011 |
| P69 | educated at | University of California, San Diego | Q622664 |
| P734 | family name | Reed | Q2136484 |
| Reed | Q2136484 | ||
| Reed | Q2136484 | ||
| P735 | given name | Jennifer | Q4677161 |
| Jennifer | Q4677161 | ||
| P106 | occupation | researcher | Q1650915 |
| P21 | sex or gender | female | Q6581072 |
| Q91949735 | 2H and 13C metabolic flux analysis elucidates in vivo thermodynamics of the ED pathway in Zymomonas mobilis |
| Q34547091 | A community effort towards a knowledge-base and mathematical model of the human pathogen Salmonella Typhimurium LT2 |
| Q57162693 | A framework for the identification of promising bio-based chemicals |
| Q29615371 | A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and thermodynamic information |
| Q35316311 | Adaptive evolution of synthetic cooperating communities improves growth performance |
| Q47218334 | Advances in gap-filling genome-scale metabolic models and model-driven experiments lead to novel metabolic discoveries. |
| Q33742075 | An automated phenotype-driven approach (GeneForce) for refining metabolic and regulatory models |
| Q21194867 | An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR) |
| Q34180306 | Analysis of metabolic capabilities using singular value decomposition of extreme pathway matrices |
| Q35067465 | BioMog: a computational framework for the de novo generation or modification of essential biomass components |
| Q33557095 | Comparisons of Shewanella strains based on genome annotations, modeling, and experiments |
| Q35941062 | Complex physiology and compound stress responses during fermentation of alkali-pretreated corn stover hydrolysate by an Escherichia coli ethanologen. |
| Q42706984 | Computational approaches in metabolic engineering |
| Q45326821 | Computational evaluation of Synechococcus sp. PCC 7002 metabolism for chemical production |
| Q38313635 | Computational methods in metabolic engineering for strain design. |
| Q24649162 | Constraint-based analysis of metabolic capacity of Salmonella typhimurium during host-pathogen interaction |
| Q28474659 | Constraint-based model of Shewanella oneidensis MR-1 metabolism: a tool for data analysis and hypothesis generation |
| Q44227293 | Constraint-based strain design using continuous modifications (CosMos) of flux bounds finds new strategies for metabolic engineering. |
| Q42371287 | Correction: Directed Evolution Reveals Unexpected Epistatic Interactions That Alter Metabolic Regulation and Enable Anaerobic Xylose Use by Saccharomyces cerevisiae |
| Q36163710 | Directed Evolution Reveals Unexpected Epistatic Interactions That Alter Metabolic Regulation and Enable Anaerobic Xylose Use by Saccharomyces cerevisiae. |
| Q42608902 | Do genome-scale models need exact solvers or clearer standards? |
| Q106625620 | Escherichia coli as a model organism for systems metabolic engineering |
| Q41774826 | Expanding Metabolic Engineering Algorithms Using Feasible Space and Shadow Price Constraint Modules |
| Q41063583 | Experimental and computational assessment of conditionally essential genes in Escherichia coli |
| Q40666119 | FOCAL: an experimental design tool for systematizing metabolic discoveries and model development |
| Q47133517 | Flux Balance Analysis Indicates that Methane Is the Lowest Cost Feedstock for Microbial Cell Factories. |
| Q98204847 | Genome-Wide Analysis of RNA Decay in the Cyanobacterium Synechococcus sp. Strain PCC 7002 |
| Q39968205 | Genome-scale in silico models of E. coli have multiple equivalent phenotypic states: assessment of correlated reaction subsets that comprise network states. |
| Q28482400 | Genome-scale modeling of light-driven reductant partitioning and carbon fluxes in diazotrophic unicellular cyanobacterium Cyanothece sp. ATCC 51142 |
| Q29616789 | Genome-scale models of microbial cells: evaluating the consequences of constraints |
| Q34508966 | Genome-scale reconstruction of metabolic networks of Lactobacillus casei ATCC 334 and 12A. |
| Q35950686 | Hierarchical thinking in network biology: the unbiased modularization of biochemical networks. |
| Q28483888 | Identification of Functional Differences in Metabolic Networks Using Comparative Genomics and Constraint-Based Models |
| Q31150325 | Improving flux predictions by integrating data from multiple strains |
| Q34768454 | Inferring ancient metabolism using ancestral core metabolic models of enterobacteria |
| Q30928624 | Integrating high-throughput and computational data elucidates bacterial networks |
| Q89021998 | Integrating proteomic or transcriptomic data into metabolic models using linear bound flux balance analysis |
| Q34031273 | Large-Scale Bi-Level Strain Design Approaches and Mixed-Integer Programming Solution Techniques |
| Q88226573 | Light-optimized growth of cyanobacterial cultures: Growth phases and productivity of biomass and secreted molecules in light-limited batch growth |
| Q41859031 | MapMaker and PathTracer for tracking carbon in genome-scale metabolic models. |
| Q34566795 | Mechanistic analysis of multi-omics datasets to generate kinetic parameters for constraint-based metabolic models. |
| Q51533799 | Metabolic assessment of E. coli as a Biofactory for commercial products. |
| Q28469320 | Metabolic reconstruction and modeling of nitrogen fixation in Rhizobium etli |
| Q98508235 | Model-driven analysis of mutant fitness experiments improves genome-scale metabolic models of Zymomonas mobilis ZM4 |
| Q30030541 | Model-enabled gene search (MEGS) allows fast and direct discovery of enzymatic and transport gene functions in the marine bacterium Vibrio fischeri. |
| Q44106304 | Multi-platform 'Omics Analysis of Human Ebola Virus Disease Pathogenesis |
| Q28212164 | Network-based analysis of metabolic regulation in the human red blood cell |
| Q33567324 | OptORF: Optimal metabolic and regulatory perturbations for metabolic engineering of microbial strains |
| Q34144792 | Predicting outcomes of steady-state 13C isotope tracing experiments using Monte Carlo sampling |
| Q35599115 | Pyruvate and lactate metabolism by Shewanella oneidensis MR-1 under fermentation, oxygen limitation, and fumarate respiration conditions |
| Q37023365 | Quantitative Assessment of Thermodynamic Constraints on the Solution Space of Genome-Scale Metabolic Models |
| Q41967499 | RELATCH: relative optimality in metabolic networks explains robust metabolic and regulatory responses to perturbations |
| Q38196259 | Refining metabolic models and accounting for regulatory effects |
| Q28483028 | Shrinking the Metabolic Solution Space Using Experimental Datasets |
| Q38154674 | Software platforms to facilitate reconstructing genome-scale metabolic networks |
| Q54374625 | Synergy between (13)C-metabolic flux analysis and flux balance analysis for understanding metabolic adaptation to anaerobiosis in E. coli. |
| Q91818512 | Systems Metabolic Engineering of Escherichia coli Improves Coconversion of Lignocellulose-Derived Sugars |
| Q35768707 | Systems approach to refining genome annotation |
| Q35589090 | The evolution of metabolic networks of E. coli |
| Q34244913 | The global transcriptional regulatory network for metabolism in Escherichia coli exhibits few dominant functional states. |
| Q35683444 | Thermodynamics and H2 Transfer in a Methanogenic, Syntrophic Community |
| Q35109629 | Thirteen years of building constraint-based in silico models of Escherichia coli |
| Q37208297 | Towards environmental systems biology of Shewanella |
| Q36371202 | Towards multidimensional genome annotation |
| Q33617304 | Transcriptional characterization of Vibrio fischeri during colonization of juvenile Euprymna scolopes |
| Q33719783 | Transcriptional patterns in both host and bacterium underlie a daily rhythm of anatomical and metabolic change in a beneficial symbiosis |
| Q28741644 | iRsp1095: a genome-scale reconstruction of the Rhodobacter sphaeroides metabolic network |
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