| scholarly article | Q13442814 |
| P50 | author | Jingping Yang | Q84432678 |
| P2093 | author name string | Victor G Corces | |
| Edward Ramos | |||
| Kevin Van Bortle | |||
| Naomi Takenaka | |||
| Jessica E Wahi | |||
| P2860 | cites work | An exceptionally conserved transcriptional repressor, CTCF, employs different combinations of zinc fingers to bind diverged promoter sequences of avian and mammalian c-myc oncogenes | Q24316326 |
| CTCF: master weaver of the genome | Q24621388 | ||
| Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome | Q24648552 | ||
| Global analysis of the insulator binding protein CTCF in chromatin barrier regions reveals demarcation of active and repressive domains | Q24655087 | ||
| Systematic discovery of regulatory motifs in conserved regions of the human genome, including thousands of CTCF insulator sites | Q24682593 | ||
| A protein interaction map of Drosophila melanogaster | Q28131783 | ||
| Comprehensive mapping of long-range interactions reveals folding principles of the human genome | Q28131819 | ||
| CTCF, a candidate trans-acting factor for X-inactivation choice | Q28211023 | ||
| CTCF is a uniquely versatile transcription regulator linked to epigenetics and disease | Q28214592 | ||
| A view of nuclear Polycomb bodies | Q28255631 | ||
| Insulators: exploiting transcriptional and epigenetic mechanisms | Q28257767 | ||
| Topological domains in mammalian genomes identified by analysis of chromatin interactions | Q28264221 | ||
| Galaxy: a web-based genome analysis tool for experimentalists | Q28270252 | ||
| Isolation, structure, and expression of even-skipped: a second pair-rule gene of Drosophila containing a homeo box | Q28282649 | ||
| Interactions between the Su(Hw) and Mod(mdg4) proteins required for gypsy insulator function | Q28364967 | ||
| Java Treeview--extensible visualization of microarray data | Q29547226 | ||
| Galaxy: a platform for interactive large-scale genome analysis | Q29547494 | ||
| Open source clustering software | Q29547702 | ||
| Genome-wide mapping of Polycomb target genes unravels their roles in cell fate transitions | Q29614512 | ||
| Spatial partitioning of the regulatory landscape of the X-inactivation centre | Q29614999 | ||
| CTCF genomic binding sites in Drosophila and the organisation of the bithorax complex | Q33290220 | ||
| Stability and dynamics of polycomb target sites in Drosophila development. | Q33367118 | ||
| A comprehensive map of insulator elements for the Drosophila genome | Q33525010 | ||
| Extensive Exon Reshuffling Over Evolutionary Time Coupled to Trans-Splicing in Drosophila | Q33678762 | ||
| Unlocking the secrets of the genome | Q33745487 | ||
| The CCCTC-binding factor (CTCF) of Drosophila contributes to the regulation of the ribosomal DNA and nucleolar stability | Q33809144 | ||
| Active promoters and insulators are marked by the centrosomal protein 190. | Q34016223 | ||
| Enhancer decommissioning by LSD1 during embryonic stem cell differentiation | Q34088491 | ||
| The modifier of mdg4 locus in Drosophila: functional complexity is resolved by trans splicing | Q34193883 | ||
| The proteomes of transcription factories containing RNA polymerases I, II or III. | Q34219352 | ||
| Three-dimensional folding and functional organization principles of the Drosophila genome | Q34248756 | ||
| The chromosomal association/dissociation of the chromatin insulator protein Cp190 of Drosophila melanogaster is mediated by the BTB/POZ domain and two acidic regions | Q34499292 | ||
| Insulators, not Polycomb response elements, are required for long-range interactions between Polycomb targets in Drosophila melanogaster | Q34528423 | ||
| A chromatin insulator driving three-dimensional Polycomb response element (PRE) contacts and Polycomb association with the chromatin fiber | Q34573068 | ||
| Genomic organization of gypsy chromatin insulators in Drosophila melanogaster | Q34588388 | ||
| Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences | Q21092859 | ||
| Model-based analysis of ChIP-Seq (MACS) | Q21183902 | ||
| Aligning short sequencing reads with Bowtie | Q34625771 | ||
| MEME-ChIP: motif analysis of large DNA datasets | Q35019674 | ||
| A cis-regulatory map of the Drosophila genome. | Q35229726 | ||
| Regulation of chromatin organization and inducible gene expression by a Drosophila insulator | Q35302779 | ||
| A protein complex network of Drosophila melanogaster | Q35869080 | ||
| Phosphorylation of histone H3 at Ser10 facilitates RNA polymerase II release from promoter-proximal pausing in Drosophila | Q36098251 | ||
| CTCF-mediated functional chromatin interactome in pluripotent cells | Q36218315 | ||
| CTCF, a conserved nuclear factor required for optimal transcriptional activity of the chicken c-myc gene, is an 11-Zn-finger protein differentially expressed in multiple forms | Q36827796 | ||
| Coordinated control of dCTCF and gypsy chromatin insulators in Drosophila | Q36965375 | ||
| Three subclasses of a Drosophila insulator show distinct and cell type-specific genomic distributions | Q37240563 | ||
| Chromatin insulators: regulatory mechanisms and epigenetic inheritance | Q37292727 | ||
| Chromatin insulators: lessons from the fly. | Q37343925 | ||
| CTCF and its protein partners: divide and rule? | Q37455629 | ||
| The pleiohomeotic functions as a negative regulator of Drosophila even-skipped gene during embryogenesis | Q37461317 | ||
| CTCF function is modulated by neighboring DNA binding factors | Q37927111 | ||
| The tumour suppressor L(3)mbt inhibits neuroepithelial proliferation and acts on insulator elements | Q38444916 | ||
| High-throughput RNA interference screens in Drosophila tissue culture cells. | Q40472933 | ||
| Identification of the Drosophila interband-specific protein Z4 as a DNA-binding zinc-finger protein determining chromosomal structure | Q40528822 | ||
| Weeder Web: discovery of transcription factor binding sites in a set of sequences from co-regulated genes | Q41011138 | ||
| The Drosophila insulator proteins CTCF and CP190 link enhancer blocking to body patterning | Q41944178 | ||
| H3K27me3 forms BLOCs over silent genes and intergenic regions and specifies a histone banding pattern on a mouse autosomal chromosome | Q42076431 | ||
| CTCF-binding elements mediate control of V(D)J recombination | Q42145363 | ||
| CTCF binding site classes exhibit distinct evolutionary, genomic, epigenomic and transcriptomic features. | Q42709520 | ||
| The phylogenetic distribution of non-CTCF insulator proteins is limited to insects and reveals that BEAF-32 is Drosophila lineage specific | Q44721718 | ||
| Drosophila BTB/POZ domains of "ttk group" can form multimers and selectively interact with each other | Q46483407 | ||
| The centrosomal protein CP190 is a component of the gypsy chromatin insulator | Q47072055 | ||
| A drosophila protein that imparts directionality on a chromatin insulator is an enhancer of position-effect variegation | Q47072182 | ||
| Probabilistic modeling of Hi-C contact maps eliminates systematic biases to characterize global chromosomal architecture. | Q51518031 | ||
| The Chriz-Z4 complex recruits JIL-1 to polytene chromosomes, a requirement for interband-specific phosphorylation of H3S10. | Q52725262 | ||
| P433 | issue | 11 | |
| P921 | main subject | Drosophila | Q312154 |
| P304 | page(s) | 2176-2187 | |
| P577 | publication date | 2012-06-21 | |
| P1433 | published in | Genome Research | Q5533485 |
| P1476 | title | Drosophila CTCF tandemly aligns with other insulator proteins at the borders of H3K27me3 domains | |
| P478 | volume | 22 |
| Q58572322 | : Linking Metabolism and Epigenetics |
| Q35270768 | A functional insulator screen identifies NURF and dREAM components to be required for enhancer-blocking |
| Q90391263 | A multi-layered structure of the interphase chromocenter revealed by proximity-based biotinylation |
| Q28484449 | A polycomb group protein is retained at specific sites on chromatin in mitosis |
| Q36613972 | A subset of Drosophila Myc sites remain associated with mitotic chromosomes colocalized with insulator proteins |
| Q34438433 | Architectural proteins: regulators of 3D genome organization in cell fate |
| Q37676975 | Are we there yet? Initial targeting of the Male-Specific Lethal and Polycomb group chromatin complexes in Drosophila |
| Q38856088 | CRISPR/Cas9 genome editing throws descriptive 3-D genome folding studies for a loop |
| Q38949804 | CTCF induces histone variant incorporation, erases the H3K27me3 histone mark and opens chromatin |
| Q36185754 | CTCF-dependent co-localization of canonical Smad signaling factors at architectural protein binding sites in D. melanogaster |
| Q26823453 | CTCF: an architectural protein bridging genome topology and function |
| Q27028081 | CTCF: the protein, the binding partners, the binding sites and their chromatin loops |
| Q90678570 | Characterization of Button Loci that Promote Homologous Chromosome Pairing and Cell-Type-Specific Interchromosomal Gene Regulation |
| Q38853109 | Chromatin Domains: The Unit of Chromosome Organization |
| Q27640577 | Chromatin Insulator Factors Involved in Long-Range DNA Interactions and Their Role in the Folding of the Drosophila Genome |
| Q40428840 | Chromatin binding of Gcn5 in Drosophila is largely mediated by CP190. |
| Q28071827 | Chromatin boundary elements organize genomic architecture and developmental gene regulation in Drosophila Hox clusters |
| Q34344792 | Chromatin immunoprecipitation indirect peaks highlight long-range interactions of insulator proteins and Pol II pausing. |
| Q36895023 | Chromatin insulators: linking genome organization to cellular function |
| Q36023839 | Computational Identification of Genomic Features That Influence 3D Chromatin Domain Formation |
| Q28249527 | Control of cell identity genes occurs in insulated neighborhoods in mammalian chromosomes |
| Q33557596 | Different enhancer classes in Drosophila bind distinct architectural proteins and mediate unique chromatin interactions and 3D architecture |
| Q36677303 | Distinct Roles of Chromatin Insulator Proteins in Control of the Drosophila Bithorax Complex |
| Q37271176 | Distinct isoforms of the Drosophila Brd4 homologue are present at enhancers, promoters and insulator sites |
| Q36923350 | Dynamic changes in the genomic localization of DNA replication-related element binding factor during the cell cycle |
| Q34407547 | Epigenetic dysregulation by nickel through repressive chromatin domain disruption |
| Q26753019 | Epigenetic silencing of tumor suppressor genes: Paradigms, puzzles, and potential |
| Q35191969 | Escape from X inactivation varies in mouse tissues |
| Q47926146 | Evolutionarily Conserved Principles Predict 3D Chromatin Organization |
| Q38228246 | Expanding the roles of chromatin insulators in nuclear architecture, chromatin organization and genome function |
| Q92262811 | Exploring the changing landscape of cell-to-cell variation after CTCF knockdown via single cell RNA-seq |
| Q38086775 | Functional implications of genome topology. |
| Q36392848 | Gene density, transcription, and insulators contribute to the partition of the Drosophila genome into physical domains |
| Q28551182 | Genome-Wide Mapping Targets of the Metazoan Chromatin Remodeling Factor NURF Reveals Nucleosome Remodeling at Enhancers, Core Promoters and Gene Insulators |
| Q48240056 | High-resolution TADs reveal DNA sequences underlying genome organization in flies. |
| Q34133622 | Histone methyltransferase MMSET/NSD2 alters EZH2 binding and reprograms the myeloma epigenome through global and focal changes in H3K36 and H3K27 methylation |
| Q38309105 | Ibf1 and Ibf2 are novel CP190-interacting proteins required for insulator function. |
| Q34048842 | Insights into the epigenomic landscape of the human malaria vector Anopheles gambiae |
| Q34485099 | Insulator function and topological domain border strength scale with architectural protein occupancy |
| Q98195575 | Insulator-based loops mediate the spreading of H3K27me3 over distant micro-domains repressing euchromatin genes |
| Q26775263 | Insulators and domains of gene expression |
| Q37029720 | Nuclear organization and genome function |
| Q37275183 | Poly(ADP-ribosyl)ation regulates insulator function and intrachromosomal interactions in Drosophila |
| Q34598874 | Polycomb domain formation depends on short and long distance regulatory cues |
| Q48002487 | Polycomb-mediated chromatin loops revealed by a subkilobase-resolution chromatin interaction map. |
| Q36304411 | Regions of very low H3K27me3 partition the Drosophila genome into topological domains |
| Q37655069 | Regulation of gene expression in the genomic context |
| Q38668767 | Regulation of gene transcription by Polycomb proteins |
| Q27013947 | Roles of chromatin insulators in the formation of long-range contacts |
| Q57477096 | Selective interactions between diverse STEs organize the ANT-C Hox cluster |
| Q38884770 | Sex combs reduced (Scr) regulatory region of Drosophila revisited |
| Q64065129 | Spatial Genome Organization: From Development to Disease |
| Q34986658 | Specificity, propagation, and memory of pericentric heterochromatin |
| Q39788246 | Spectral identification of topological domains |
| Q49221551 | Sub-kb Hi-C in D. melanogaster reveals conserved characteristics of TADs between insect and mammalian cells |
| Q42960313 | Successive gain of insulator proteins in arthropod evolution |
| Q37633478 | Surviving an identity crisis: a revised view of chromatin insulators in the genomics era. |
| Q52613283 | Tethering of CHROMATOR and dCTCF proteins results in decompaction of condensed bands in the Drosophila melanogaster polytene chromosomes but does not affect their transcription and replication timing. |
| Q90239343 | The Dm-Myb Oncoprotein Contributes to Insulator Function and Stabilizes Repressive H3K27me3 PcG Domains |
| Q35034322 | The Drosophila eve insulator Homie promotes eve expression and protects the adjacent gene from repression by polycomb spreading |
| Q30410709 | The RNA-binding protein Rumpelstiltskin antagonizes gypsy chromatin insulator function in a tissue-specific manner |
| Q90381925 | The Role of Insulation in Patterning Gene Expression |
| Q55492193 | The Ubx Polycomb response element bypasses an unpaired Fab-8 insulator via cis transvection in Drosophila. |
| Q97544672 | The genetic factors of bilaterian evolution |
| Q37168265 | The insulator protein Suppressor of Hairy wing is required for proper ring canal development during oogenesis in Drosophila |
| Q27010832 | The role of chromatin insulators in nuclear architecture and genome function |
| Q64105263 | The same domain of Su(Hw) is required for enhancer blocking and direct promoter repression |
| Q37576480 | Three-Dimensional Genome Organization and Function in Drosophila |
| Q34499471 | Tissue-specific regulation of chromatin insulator function |
| Q43131993 | Two new insulator proteins, Pita and ZIPIC, target CP190 to chromatin |
| Q36380044 | Uncovering direct and indirect molecular determinants of chromatin loops using a computational integrative approach |
| Q35470559 | Widespread rearrangement of 3D chromatin organization underlies polycomb-mediated stress-induced silencing |
| Q34044346 | dREAM co-operates with insulator-binding proteins and regulates expression at divergently paired genes |
| Q36777890 | tDNA insulators and the emerging role of TFIIIC in genome organization |
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