A Whole Genome Screen for Minisatellite Stability Genes in Stationary-Phase Yeast Cells

scientific article published on 11 March 2013

A Whole Genome Screen for Minisatellite Stability Genes in Stationary-Phase Yeast Cells is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1534/G3.112.005397
P8608Fatcat IDrelease_ah2yspoweza35lteoka2x3jxaq
P932PMC publication ID3618361
P698PubMed publication ID23550123
P5875ResearchGate publication ID236101135

P2093author name stringDavid T Kirkpatrick
Peter A Jauert
Chad L Myers
Bonnie Alver
Benjamin VanderSluis
Laura Brosnan
Melissa O'Hehir
P2860cites workCOT1, a gene involved in cobalt accumulation in Saccharomyces cerevisiaeQ24601781
Characterisation of a novel minisatellite that provides multiple splice donor sites in an interferon-induced transcriptQ24628850
Mrc1 and DNA polymerase epsilon function together in linking DNA replication and the S phase checkpointQ24642626
Comparative genomics and molecular dynamics of DNA repeats in eukaryotesQ24650948
The Saccharomyces cerevisiae Msh2 and Msh6 proteins form a complex that specifically binds to duplex oligonucleotides containing mismatched DNA base pairsQ27930815
Zinc transporters that regulate vacuolar zinc storage in Saccharomyces cerevisiaeQ27930956
Yeast Mon1p/Aut12p functions in vacuolar fusion of autophagosomes and cvt-vesicles.Q27931117
Interactions among mutations affecting spontaneous mutation, mitotic recombination, and DNA repair in yeastQ27932502
Zap1p, a metalloregulatory protein involved in zinc-responsive transcriptional regulation in Saccharomyces cerevisiaeQ27933621
Mitotic spindle positioning in Saccharomyces cerevisiae is accomplished by antagonistically acting microtubule motor proteinsQ27933784
Characterization of the Five Replication Factor C Genes of Saccharomyces cerevisiaeQ27933916
The Ccz1-Mon1 protein complex is required for the late step of multiple vacuole delivery pathwaysQ27934175
Double-strand break repair in yeast requires both leading and lagging strand DNA polymerasesQ27934176
Binding of insertion/deletion DNA mismatches by the heterodimer of yeast mismatch repair proteins MSH2 and MSH3.Q27934985
Analysis of Sec22p in endoplasmic reticulum/Golgi transport reveals cellular redundancy in SNARE protein functionQ27935411
The RFC2 gene encoding a subunit of replication factor C of Saccharomyces cerevisiaeQ27935519
Sli15 associates with the ipl1 protein kinase to promote proper chromosome segregation in Saccharomyces cerevisiaeQ27935777
The list of cytoplasmic ribosomal proteins of Saccharomyces cerevisiaeQ27936301
DNA repair synthesis during base excision repair in vitro is catalyzed by DNA polymerase epsilon and is influenced by DNA polymerases alpha and delta in Saccharomyces cerevisiaeQ27937651
Cloning DPB3, the gene encoding the third subunit of DNA polymerase II of Saccharomyces cerevisiaeQ27938074
Transcription of the constitutively expressed yeast enolase gene ENO1 is mediated by positive and negative cis-acting regulatory sequencesQ27939033
Processing and joining of DNA ends coordinated by interactions among Dnl4/Lif1, Pol4, and FEN-1.Q27939628
Identification in Saccharomyces cerevisiae of two isoforms of a novel mitochondrial transporter for 2-oxoadipate and 2-oxoglutarateQ27940002
The yeast ZRT1 gene encodes the zinc transporter protein of a high-affinity uptake system induced by zinc limitationQ27940126
Systematic genetic analysis with ordered arrays of yeast deletion mutantsQ28131618
Genetic polymorphism of MUC7: allele frequencies and association with asthmaQ28191158
DNA mismatch repair and mutation avoidance pathwaysQ28211143
Human chromosome fragilityQ28261002
Flap endonuclease 1: a central component of DNA metabolismQ28266199
Human chromosomal fragile site FRA16B is an amplified AT-rich minisatellite repeatQ28304011
Unstable insertion in the 5' flanking region of the cystatin B gene is the most common mutation in progressive myoclonus epilepsy type 1, EPM1Q28304987
Unstable minisatellite expansion causing recessively inherited myoclonus epilepsy, EPM1Q28307006
Redundancy of Saccharomyces cerevisiae MSH3 and MSH6 in MSH2-dependent mismatch repairQ29615027
GO::TermFinder--open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genesQ29616254
Destabilization of tracts of simple repetitive DNA in yeast by mutations affecting DNA mismatch repairQ29618879
Identification of bronchioalveolar stem cells in normal lung and lung cancerQ29619267
Chromosomal passengers: conducting cell divisionQ29620468
The eukaryotic leading and lagging strand DNA polymerases are loaded onto primer-ends via separate mechanisms but have comparable processivity in the presence of PCNA.Q33300908
Asymmetry in chromosome pairing: a major factor in de novo mutation and the production of genetic disease in manQ33593235
Replication and recombination factors contributing to recombination-dependent bypass of DNA lesions by template switchQ33750098
The proteomics of quiescent and nonquiescent cell differentiation in yeast stationary-phase cultures.Q33810828
Mutations in the MSH3 gene preferentially lead to deletions within tracts of simple repetitive DNA in Saccharomyces cerevisiaeQ33842093
Minisatellites: mutability and genome architecture.Q33909915
Increased spontaneous mitotic segregation in MMS-sensitive mutants of Saccharomyces cerevisiaeQ33992383
Meta-analysis of the association between the 7-repeat allele of the dopamine D(4) receptor gene and attention deficit hyperactivity disorderQ34082530
"Sleeping beauty": quiescence in Saccharomyces cerevisiaeQ34348944
A meta-analysis of association studies between the 10-repeat allele of a VNTR polymorphism in the 3'-UTR of dopamine transporter gene and attention deficit hyperactivity disorderQ34620108
A role for FEN-1 in nonhomologous DNA end joining: the order of strand annealing and nucleolytic processing eventsQ34988376
Predicting human minisatellite polymorphismQ35020831
Minisatellite alterations in ZRT1 mutants occur via RAD52-dependent and RAD52-independent mechanisms in quiescent stationary phase yeast cellsQ35028138
DNA polymerase delta is required for base excision repair of DNA methylation damage in Saccharomyces cerevisiaeQ35760750
Hematopoietic stem cells and their niche.Q36175339
Ninety-six haploid yeast strains with individual disruptions of open reading frames between YOR097C and YOR192C, constructed for the Saccharomyces genome deletion project, have an additional mutation in the mismatch repair gene MSH3Q36287766
Multiple pathways regulate minisatellite stability during stationary phase in yeastQ36297149
Zinc regulates the stability of repetitive minisatellite DNA tracts during stationary phaseQ36416305
Characterization of differentiated quiescent and nonquiescent cells in yeast stationary-phase cultures.Q36488975
A Bir1-Sli15 complex connects centromeres to microtubules and is required to sense kinetochore tensionQ36491412
Novel checkpoint pathway organization promotes genome stability in stationary-phase yeast cellsQ36559708
Dual requirement in yeast DNA mismatch repair for MLH1 and PMS1, two homologs of the bacterial mutL geneQ36643609
Nucleotide excision repair DNA synthesis by DNA polymerase epsilon in the presence of PCNA, RFC, and RPA.Q36699598
Synthesis and function of membrane phosphoinositides in budding yeast, Saccharomyces cerevisiaeQ36768641
Stationary phase in the yeast Saccharomyces cerevisiaeQ37059288
Mirk regulates the exit of colon cancer cells from quiescenceQ37371684
Saccharomyces cerevisiae flap endonuclease 1 uses flap equilibration to maintain triplet repeat stabilityQ37424442
Members of therel/NF-χB family of transcriptional regulatory proteins bind theHRAS1minisatellite DNA sequenceQ38328636
Instability of the human minisatellite CEB1 in rad27Delta and dna2-1 replication-deficient yeast cells.Q39644924
RAD1 controls the meiotic expansion of the human HRAS1 minisatellite in Saccharomyces cerevisiaeQ39673758
The second subunit of DNA polymerase III (delta) is encoded by the HYS2 gene in Saccharomyces cerevisiaeQ39722600
Microsatellite instability in yeast: dependence on repeat unit size and DNA mismatch repair genesQ40022200
HYS2, an essential gene required for DNA replication in Saccharomyces cerevisiaeQ40395685
Population genetics of the HRAS1 minisatellite locus.Q40543646
Mammalian meiotic recombination: a reexaminationQ40648901
Sequence-based estimation of minisatellite and microsatellite repeat variabilityQ40815198
Systematic exploration of essential yeast gene function with temperature-sensitive mutantsQ41541576
Differences and similarities between various tandem repeat sequences: minisatellites and microsatellitesQ41702537
The HRAS1 minisatellite locus and risk of ovarian cancer.Q41718669
Involvement of the yeast DNA polymerase delta in DNA repair in vivoQ41810177
Length and sequence heterozygosity differentially affect HRAS1 minisatellite stability during meiosis in yeastQ42030100
MLH1, PMS1, and MSH2 interactions during the initiation of DNA mismatch repair in yeastQ42427955
Genome-wide analysis of DNA turnover and gene expression in stationary-phase Saccharomyces cerevisiaeQ43157348
Replication factor C clamp loader subunit arrangement within the circular pentamer and its attachment points to proliferating cell nuclear antigen.Q44608896
The minisatellite in the diabetes susceptibility locus IDDM2 regulates insulin transcription.Q46033146
A candidate protein kinase C gene, PKC1, is required for the S. cerevisiae cell cycleQ46147797
Synthetic genetic array analysis in Saccharomyces cerevisiae.Q46885794
Distinct mutation patterns of breast cancer-associated alleles of the HRAS1 minisatellite locusQ47606298
Complete nucleotide sequences of the T24 human bladder carcinoma oncogene and its normal homologueQ48399601
Rare HRAS1 alleles are a risk factor for the development of brain tumors.Q55473875
Transcriptional enhancer activity in the variable tandem repeat DNA sequence downstream of the human Ha-ras 1 geneQ68161476
Requirement of the yeast MSH3 and MSH6 genes for MSH2-dependent genomic stabilityQ71081409
The isolation of new DNA synthesis mutants in the yeast Saccharomyces cerevisiaeQ71440958
Minisatellites and human diseaseQ71768158
[Function of DNA polymerases in budding yeast]Q72170107
Red pigment of adenine-deficient yeast Saccharomyces cerevisiaeQ72244045
Requirement of yeast DNA polymerase delta in post-replicational repair of UV-damaged DNAQ73770350
H-RAS 1 minisatellite rare alleles: a genetic susceptibility and prognostic factor for non-Hodgkin's lymphomaQ74794567
Genetic susceptibility associated with rare HRAS1 variable number of tandem repeats alleles in Spanish non-small cell lung cancer patientsQ78074846
P433issue4
P921main subjectwhole genome sequencingQ2068526
P1104number of pages16
P304page(s)741-756
P577publication date2013-03-11
P1433published inG3Q5512701
P1476titleA Whole Genome Screen for Minisatellite Stability Genes in Stationary-Phase Yeast Cells
P478volume3

Reverse relations

cites work (P2860)
Q35590051Leveraging DNA damage response signaling to identify yeast genes controlling genome stability
Q60930603Piecing Together How Peroxiredoxins Maintain Genomic Stability

Search more.