DNA polymerases in adaptive immunity

scientific article published on 14 March 2008

DNA polymerases in adaptive immunity is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

External links are
P356DOI10.1038/NRI2281
P698PubMed publication ID18340343
P5875ResearchGate publication ID5512684

P50authorClaude-Agnès ReynaudQ21257492
P2093author name stringJean-Claude Weill
P2860cites workhRAD30 mutations in the variant form of xeroderma pigmentosumQ22010237
Eukaryotic DNA PolymerasesQ22065416
Two novel human and mouse DNA polymerases of the polX familyQ24290234
Activation-induced cytidine deaminase (AID) deficiency causes the autosomal recessive form of the Hyper-IgM syndrome (HIGM2)Q24290325
Hairpin opening and overhang processing by an Artemis/DNA-dependent protein kinase complex in nonhomologous end joining and V(D)J recombinationQ24294409
SOS-induced DNA polymerases enhance long-term survival and evolutionary fitnessQ24530758
The translesion DNA polymerase theta plays a dominant role in immunoglobulin gene somatic hypermutationQ24537096
Association of DNA polymerase mu (pol mu) with Ku and ligase IV: role for pol mu in end-joining double-strand break repairQ24540101
High-efficiency bypass of DNA damage by human DNA polymerase QQ24561381
Mouse Rev1 protein interacts with multiple DNA polymerases involved in translesion DNA synthesisQ24594244
The BRCT domain of mammalian Rev1 is involved in regulating DNA translesion synthesisQ24794355
Activation-induced cytidine deaminase initiates immunoglobulin gene conversion and hypermutation by a common intermediateQ24802780
Implication of DNA polymerase lambda in alignment-based gap filling for nonhomologous DNA end joining in human nuclear extracts.Q27919645
A gradient of template dependence defines distinct biological roles for family X polymerases in nonhomologous end joiningQ27919680
Deoxycytidyl transferase activity of yeast REV1 proteinQ27931173
Evidence that the long murine terminal deoxynucleotidyltransferase isoform plays no role in the control of V(D)J junctional diversity.Q42828788
Lesion bypass activities of human DNA polymerase mu.Q44135115
Immunoglobulin isotype switching is inhibited and somatic hypermutation perturbed in UNG-deficient miceQ44194766
Fidelity and processivity of DNA synthesis by DNA polymerase kappa, the product of the human DINB1 geneQ45345090
Somatic mutation of immunoglobulin light-chain variable-region genesQ48409137
Disruption of the developmentally regulated Rev3l gene causes embryonic lethality.Q52163744
Disruption of mouse polymerase zeta (Rev3) leads to embryonic lethality and impairs blastocyst development in vitro.Q52541352
Disruption of the Rev3l-encoded catalytic subunit of polymerase zeta in mice results in early embryonic lethality.Q52541355
Variability in the Lambda Light Chain Sequences of Mouse AntibodyQ52832029
IgG antibodies to phosphorylcholine exhibit more diversity than their IgM counterpartsQ54526958
Role of mutator alleles in adaptive evolution.Q54564129
The absence of DNA polymerase kappa does not affect somatic hypermutation of the mouse immunoglobulin heavy chain gene.Q54777328
Somatic mutation and the maturation of immune response to 2-phenyl oxazoloneQ58019387
Decreased Frequency of Somatic Hypermutation and Impaired Affinity Maturation but Intact Germinal Center Formation in Mice Expressing Antisense RNA to DNA PolymeraseQ58424602
Origin of Antibody VariationQ59057486
8-oxo-guanine bypass by human DNA polymerases in the presence of auxiliary proteinsQ59075328
DNA polymerases eta and theta function in the same genetic pathway to generate mutations at A/T during somatic hypermutation of Ig genesQ80194521
Strand-biased spreading of mutations during somatic hypermutationQ80970581
Uracil DNA glycosylase disruption blocks Ig gene conversion and induces transition mutationsQ40338305
Dual roles for DNA polymerase eta in homologous DNA recombination and translesion DNA synthesisQ40342097
Human DNA polymerase eta promotes DNA synthesis from strand invasion intermediates of homologous recombinationQ40342102
DNA polymerase mu (Pol mu), homologous to TdT, could act as a DNA mutator in eukaryotic cellsQ40410915
Mutational analysis of terminal deoxynucleotidyltransferase-mediated N-nucleotide addition in V(D)J recombinationQ40564340
AID-dependent somatic hypermutation occurs as a DNA single-strand event in the BL2 cell lineQ40714843
AID is essential for immunoglobulin V gene conversion in a cultured B cell lineQ40746479
Requirement of the activation-induced deaminase (AID) gene for immunoglobulin gene conversionQ40750743
The structural repertoire of the human V kappa domainQ40789466
TdT-accessible breaks are scattered over the immunoglobulin V domain in a constitutively hypermutating B cell lineQ40982321
Clonal selection and learning in the antibody systemQ41002744
Rearrangement/hypermutation/gene conversion: when, where and why?Q41113095
Strand-biased defect in C/G transversions in hypermutating immunoglobulin genes in Rev1-deficient miceQ41807812
Efficient processing of DNA ends during yeast nonhomologous end joining. Evidence for a DNA polymerase beta (Pol4)-dependent pathwayQ27938668
The XPV (xeroderma pigmentosum variant) gene encodes human DNA polymerase etaQ28115711
Genes and antibodiesQ28185156
DNA polymerase eta is an A-T mutator in somatic hypermutation of immunoglobulin variable genesQ28190856
Marginal-zone B cellsQ28201000
Immunoglobulin kappa light chain gene rearrangement is impaired in mice deficient for DNA polymerase muQ28202970
Error rate and specificity of human and murine DNA polymerase etaQ28216092
Nonoverlapping functions of DNA polymerases mu, lambda, and terminal deoxynucleotidyltransferase during immunoglobulin V(D)J recombination in vivoQ28253487
DNA joint dependence of pol X family polymerase action in nonhomologous end joiningQ28257407
PCNA binding through a conserved motifQ28274063
PCNA, the maestro of the replication forkQ28303101
Somatic hypermutation and class switch recombination in Msh6(-/-)Ung(-/-) double-knockout miceQ28505784
DNA polymerase theta contributes to the generation of C/G mutations during somatic hypermutation of Ig genesQ28506592
Specific expression of activation-induced cytidine deaminase (AID), a novel member of the RNA-editing deaminase family in germinal center B cellsQ28509339
Somatic hypermutation in MutS homologue (MSH)3-, MSH6-, and MSH3/MSH6-deficient mice reveals a role for the MSH2-MSH6 heterodimer in modulating the base substitution patternQ28510640
Altered somatic hypermutation and reduced class-switch recombination in exonuclease 1-mutant miceQ28513971
Mismatch recognition and uracil excision provide complementary paths to both Ig switching and the A/T-focused phase of somatic mutationQ28586304
DNA polymerase lambda (Pol lambda), a novel eukaryotic DNA polymerase with a potential role in meiosisQ28586606
129-derived strains of mice are deficient in DNA polymerase iota and have normal immunoglobulin hypermutationQ28587504
Distinct and opposite diversifying activities of terminal transferase splice variantsQ28587746
Mice reconstituted with DNA polymerase beta-deficient fetal liver cells are able to mount a T cell-dependent immune response and mutate their Ig genes normallyQ28592782
Absence of DNA polymerase theta results in decreased somatic hypermutation frequency and altered mutation patterns in Ig genesQ28594477
Error-free and error-prone lesion bypass by human DNA polymerase kappa in vitroQ28646677
Response of human REV1 to different DNA damage: preferential dCMP insertion opposite the lesionQ28646698
Interaction of human DNA polymerase eta with monoubiquitinated PCNA: a possible mechanism for the polymerase switch in response to DNA damageQ28646728
Class switch recombination and hypermutation require activation-induced cytidine deaminase (AID), a potential RNA editing enzymeQ29547201
Somatic generation of antibody diversityQ29616439
Eukaryotic translesion synthesis DNA polymerases: specificity of structure and functionQ29617871
Ubiquitin-binding domains in Y-family polymerases regulate translesion synthesisQ29619757
Eukaryotic polymerases iota and zeta act sequentially to bypass DNA lesionsQ29619958
The fidelity of DNA synthesis by yeast DNA polymerase zeta alone and with accessory proteins.Q33257520
A role for PCNA ubiquitination in immunoglobulin hypermutationQ33263578
Mismatch repair and immunoglobulin gene hypermutation: did we learn something?Q33756019
Different mutation signatures in DNA polymerase eta- and MSH6-deficient mice suggest separate roles in antibody diversificationQ33853914
Light chain gene conversion continues at high rate in an ALV-induced cell line.Q33918728
Artemis, a novel DNA double-strand break repair/V(D)J recombination protein, is mutated in human severe combined immune deficiency.Q33945446
Quantitative measurement of translesion replication in human cells: evidence for bypass of abasic sites by a replicative DNA polymeraseQ34020161
Eukaryotic DNA polymerases: proposal for a revised nomenclature.Q34093113
Correlation of somatic hypermutation specificity and A-T base pair substitution errors by DNA polymerase eta during copying of a mouse immunoglobulin kappa light chain transgene.Q34098247
Error-prone repair DNA polymerases in prokaryotes and eukaryotesQ34131455
Induction of somatic hypermutation in immunoglobulin genes is dependent on DNA polymerase iota.Q34157224
The expanding polymerase universeQ34186298
Mammalian DNA beta-polymerase in base excision repair of alkylation damage.Q34367301
Induction of somatic mutation in a human B cell line in vitroQ34418234
DNA polymerase eta is the sole contributor of A/T modifications during immunoglobulin gene hypermutation in the mouseQ34595025
Increased catalytic activity and altered fidelity of human DNA polymerase iota in the presence of manganeseQ34645605
Specialized DNA polymerases, cellular survival, and the genesis of mutationsQ34662609
V(D)J recombination: RAG proteins, repair factors, and regulationQ34667417
Trex1 exonuclease degrades ssDNA to prevent chronic checkpoint activation and autoimmune diseaseQ34719398
AID and mismatch repair in antibody diversificationQ34770418
What role for AID: mutator, or assembler of the immunoglobulin mutasome?Q35164207
Known components of the immunoglobulin A:T mutational machinery are intact in Burkitt lymphoma cell lines with G:C biasQ35792957
DNA polymerase beta is able to repair breaks in switch regions and plays an inhibitory role during immunoglobulin class switch recombinationQ36229513
A/T mutagenesis in hypermutated immunoglobulin genes strongly depends on PCNAK164 modificationQ36229591
Down-regulation of DNA polymerase beta accompanies somatic hypermutation in human BL2 cell linesQ36238936
The translesion DNA polymerase zeta plays a major role in Ig and bcl-6 somatic hypermutation.Q36248087
Suffering in silence: the tolerance of DNA damageQ36337954
DNA polymerase eta is involved in hypermutation occurring during immunoglobulin class switch recombination.Q36399002
Absence of DNA polymerase eta reveals targeting of C mutations on the nontranscribed strand in immunoglobulin switch regionsQ36399387
Contribution of DNA polymerase eta to immunoglobulin gene hypermutation in the mouseQ36403507
A role for Msh6 but not Msh3 in somatic hypermutation and class switch recombinationQ36403922
Somatic hypermutation: subverted DNA repairQ36449996
Heavy chain variable region contribution to the NPb family of antibodies: somatic mutation evident in a gamma 2a variable regionQ36630020
Cernunnos-XLF, a recently identified non-homologous end-joining factor required for the development of the immune system.Q36646663
Ongoing diversification of the rearranged immunoglobulin light-chain gene in a bursal lymphoma cell lineQ36712061
Molecular mechanisms of antibody somatic hypermutation.Q36747477
A biochemically defined system for mammalian nonhomologous DNA end joiningQ38333666
Rev1 is essential for DNA damage tolerance and non-templated immunoglobulin gene mutation in a vertebrate cell line.Q39744882
Normal hypermutation in antibody genes from congenic mice defective for DNA polymerase iota.Q40323781
P433issue4
P304page(s)302-312
P577publication date2008-03-14
P1433published inNature Reviews ImmunologyQ43355
P1476titleDNA polymerases in adaptive immunity
P478volume8

Reverse relations

cites work (P2860)
Q276557313D architecture of DNA Pol α reveals the functional core of multi-subunit replicative polymerases
Q91666298A practical guide for mutational signature analysis in hematological malignancies
Q34118000AID and somatic hypermutation.
Q36443102AID-associated DNA repair pathways regulate malignant transformation in a murine model of BCL6-driven diffuse large B-cell lymphoma.
Q37815430AID: a riddle wrapped in a mystery inside an enigma
Q37326085Competitive repair pathways in immunoglobulin gene hypermutation.
Q90057553Current insights into the mechanism of mammalian immunoglobulin class switch recombination
Q37197911DNA polymerase ι functions in the generation of tandem mutations during somatic hypermutation of antibody genes
Q41909494DNA polymerases at the replication fork in eukaryotes
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Q28241953Differential expression of APE1 and APE2 in germinal centers promotes error-prone repair and A:T mutations during somatic hypermutation
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Q24646190Lymphocyte-specific compensation for XLF/cernunnos end-joining functions in V(D)J recombination
Q28537676Molecular evolution and diversity of Conus peptide toxins, as revealed by gene structure and intron sequence analyses
Q41984058Pms2 and uracil-DNA glycosylases act jointly in the mismatch repair pathway to generate Ig gene mutations at A-T base pairs.
Q36699771Proteasomal degradation restricts the nuclear lifespan of AID
Q33496409Protein phosphatase 2A-dependent dephosphorylation of replication protein A is required for the repair of DNA breaks induced by replication stress
Q33557562Proximity to AGCT sequences dictates MMR-independent versus MMR-dependent mechanisms for AID-induced mutation via UNG2.
Q90050600Repertoire Sequencing of B Cells Elucidates the Role of UNG and Mismatch Repair Proteins in Somatic Hypermutation in Humans
Q33820327Replicative Stress and the FHIT Gene: Roles in Tumor Suppression, Genome Stability and Prevention of Carcinogenesis
Q41999588Rev1 recruits ung to switch regions and enhances du glycosylation for immunoglobulin class switch DNA recombination
Q28266265Role of non-homologous end joining in V(D)J recombination
Q52431678SAMHD1 enhances immunoglobulin hypermutation by promoting transversion mutation.
Q24630493Separate roles of structured and unstructured regions of Y-family DNA polymerases
Q33743606Somatic hypermutation at A/T-rich oligonucleotide substrates shows different strand polarities in Ung-deficient or -proficient backgrounds.

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