| P50 | author | Donald E Low | Q60650638 |
| | Weilong Hao | Q40895943 |
| P2093 | author name string | Ying Kong | |
| | Frances B Jamieson | |
| | David C Alexander | |
| | Jennifer H Ma | |
| | Raymond S W Tsang | |
| | Keisha Warren | |
| P2860 | cites work | Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths | Q21090212 |
| | A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action | Q21203780 |
| | BLAST+: architecture and applications | Q21284368 |
| | CRISPR Provides Acquired Resistance Against Viruses in Prokaryotes | Q21508827 |
| | Complete Genome Sequence of Neisseria meningitidis Serogroup B Strain MC58 | Q22065549 |
| | DNA uptake during bacterial transformation | Q22121988 |
| | Complete DNA sequence of a serogroup A strain of Neisseria meningitidis Z2491 | Q22122399 |
| | MUSCLE: multiple sequence alignment with high accuracy and high throughput | Q24613456 |
| | Automated finishing with autofinish | Q24621392 |
| | Biology of DNA restriction | Q24634671 |
| | REBASE--a database for DNA restriction and modification: enzymes, genes and genomes | Q24644735 |
| | Coevolution of DNA uptake sequences and bacterial proteomes | Q24652799 |
| | Multilocus sequence typing: a portable approach to the identification of clones within populations of pathogenic microorganisms | Q24685491 |
| | Fuzzy species among recombinogenic bacteria | Q24801801 |
| | The neighbor-joining method: a new method for reconstructing phylogenetic trees | Q25939010 |
| | Horizontal gene transfer and the evolution of bacterial and archaeal population structure | Q27006506 |
| | RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models | Q27860746 |
| | CAP3: A DNA sequence assembly program | Q27860964 |
| | The COG database: a tool for genome-scale analysis of protein functions and evolution | Q27936664 |
| | DNA uptake in bacteria | Q28146170 |
| | Application of phylogenetic networks in evolutionary studies | Q28276801 |
| | Phylogenomics: the beginning of incongruence? | Q28298382 |
| | HGT turbulence: Confounding phylogenetic influence of duplicative horizontal transfer and differential gene conversion | Q28730339 |
| | NeMeSys: a biological resource for narrowing the gap between sequence and function in the human pathogen Neisseria meningitidis | Q28749761 |
| | CONSEL: for assessing the confidence of phylogenetic tree selection | Q29547244 |
| | Genome-scale approaches to resolving incongruence in molecular phylogenies | Q29547249 |
| | An approximately unbiased test of phylogenetic tree selection | Q29547508 |
| | How clonal are bacteria? | Q29618572 |
| | A genomic approach to bacterial taxonomy: an examination and proposed reclassification of species within the genus Neisseria. | Q30455302 |
| | Inference of bacterial microevolution using multilocus sequence data | Q31083111 |
| | Natural transformation of helicobacter pylori involves the integration of short DNA fragments interrupted by gaps of variable size | Q33417645 |
| | Phasevarions mediate random switching of gene expression in pathogenic Neisseria | Q33434451 |
| | Genome sequencing reveals widespread virulence gene exchange among human Neisseria species | Q33646735 |
| | BIGSdb: Scalable analysis of bacterial genome variation at the population level. | Q33767145 |
| | The relative contributions of recombination and mutation to the divergence of clones of Neisseria meningitidis | Q33879680 |
| | Virulence evolution of the human pathogen Neisseria meningitidis by recombination in the core and accessory genome | Q33889347 |
| | Periodic extinctions of transposable elements in bacterial lineages: evidence from intragenomic variation in multiple genomes | Q82062766 |
| | Detection of a geographical and endemic cluster of hyper-invasive meningococcal strains | Q83534491 |
| | The first use of an investigational multicomponent meningococcal serogroup B vaccine (4CMenB) in humans | Q84920371 |
| | Genetic and antigenic characterization of invasive endemic serogroup B Neisseria meningitidis from Ontario, Canada, in 2001-2010 | Q87412766 |
| | Inferring bacterial genome flux while considering truncated genes | Q34120998 |
| | Neisseria meningitidis is structured in clades associated with restriction modification systems that modulate homologous recombination | Q34168120 |
| | Origin of the diversity in DNA recognition domains in phasevarion associated modA genes of pathogenic Neisseria and Haemophilus influenzae | Q34211653 |
| | Phylogenetic incongruence in E. coli O104: understanding the evolutionary relationships of emerging pathogens in the face of homologous recombination | Q34228313 |
| | Impact of homologous and non-homologous recombination in the genomic evolution of Escherichia coli | Q34308862 |
| | The effect of bacterial recombination on adaptation on fitness landscapes with limited peak accessibility | Q34468851 |
| | Comparative genomics of the restriction-modification systems in Helicobacter pylori | Q34489772 |
| | The fate of laterally transferred genes: life in the fast lane to adaptation or death | Q34520049 |
| | Automated extraction of typing information for bacterial pathogens from whole genome sequence data: Neisseria meningitidis as an exemplar. | Q34570146 |
| | Recombination within natural populations of pathogenic bacteria: short-term empirical estimates and long-term phylogenetic consequences | Q34588929 |
| | DNA sequence similarity requirements for interspecific recombination in Bacillus | Q34608261 |
| | Epidemic meningitis, meningococcaemia, and Neisseria meningitidis | Q34644525 |
| | Intercontinental spread of a genetically distinctive complex of clones of Neisseria meningitidis causing epidemic disease | Q35615516 |
| | Extensive genomic variation within clonal complexes of Neisseria meningitidis. | Q35623008 |
| | Interspecies recombination between the penA genes of Neisseria meningitidis and commensal Neisseria species during the emergence of penicillin resistance in N. meningitidis: natural events and laboratory simulation | Q36104664 |
| | Context-dependent conservation of DNA methyltransferases in bacteria | Q36180224 |
| | Whole-genome comparison of disease and carriage strains provides insights into virulence evolution in Neisseria meningitidis | Q36491155 |
| | Role of homologous recombination in adaptive diversification of extraintestinal Escherichia coli | Q36558824 |
| | Recombination and the nature of bacterial speciation | Q36719090 |
| | The changing epidemiology of meningococcal disease in North America 1945-2010. | Q36887966 |
| | Restriction and modification systems | Q37041891 |
| | The interplay of homologous recombination and horizontal gene transfer in bacterial speciation | Q37409293 |
| | Genome flexibility in Neisseria meningitidis | Q37499451 |
| | NmeSI restriction-modification system identified by representational difference analysis of a hypervirulent Neisseria meningitidis strain | Q39518946 |
| | Extensive genomic variation within clonal bacterial groups resulted from homologous recombination | Q40929003 |
| | Characterization of fHbp, nhba (gna2132), nadA, porA, and sequence type in group B meningococcal case isolates collected in England and Wales during January 2008 and potential coverage of an investigational group B meningococcal vaccine | Q41012990 |
| | Does gene translocation accelerate the evolution of laterally transferred genes? | Q41874054 |
| | The impact of HGT on phylogenomic reconstruction methods | Q43977153 |
| | A novel epigenetic regulator associated with the hypervirulent Neisseria meningitidis clonal complex 41/44. | Q44462970 |
| | Maintenance of species identity and controlling speciation of bacteria: a new function for restriction/modification systems? | Q44625634 |
| | The influence of recombination on the population structure and evolution of the human pathogen Neisseria meningitidis | Q45038075 |
| | Horizontal gene transfer accelerates genome innovation and evolution. | Q45961682 |
| | The repertoire of minimal mobile elements in the Neisseria species and evidence that these are involved in horizontal gene transfer in other bacteria | Q48077126 |
| | Clonal divergence in Escherichia coli as a result of recombination, not mutation | Q48077857 |
| | The minimal mobile element. | Q48269824 |
| | A comparison of homologous recombination rates in bacteria and archaea. | Q51677801 |
| | Antibiotic resistance plasmids spread among natural isolates of Escherichia coli in spite of CRISPR elements. | Q52422665 |
| P433 | issue | 9 | |
| P921 | main subject | biodiversity | Q47041 |
| | Neisseria meningitidis | Q154625 |
| P304 | page(s) | 1611-1627 | |
| P577 | publication date | 2013-01-01 | |
| P1433 | published in | Genome Biology and Evolution | Q15817736 |
| P1476 | title | Homologous recombination drives both sequence diversity and gene content variation in Neisseria meningitidis | |
| P478 | volume | 5 | |