Regulation of mammalian nucleotide metabolism and biosynthesis

scientific article

Regulation of mammalian nucleotide metabolism and biosynthesis is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

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P356DOI10.1093/NAR/GKV047
P932PMC publication ID4344498
P698PubMed publication ID25628363
P5875ResearchGate publication ID271599115

P2093author name stringAndrew N Lane
Teresa W-M Fan
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Levels of hypoxia-inducible factor-1alpha independently predict prognosis in patients with lymph node negative breast carcinomaQ28181979
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The control of fluxQ28237216
Nuclear targeting of 6-phosphofructo-2-kinase (PFKFB3) increases proliferation via cyclin-dependent kinasesQ28246409
Pharmacogenetics of thiopurine S-methyltransferase and thiopurine therapyQ28269559
c-Myc is a universal amplifier of expressed genes in lymphocytes and embryonic stem cellsQ28275988
Isotopically nonstationary 13C flux analysis of Myc-induced metabolic reprogramming in B-cells.Q36503881
Ribonucleotide reductase association with mammalian liver mitochondriaQ36812510
Gene expression of human DNA polymerase alpha during cell proliferation and the cell cycleQ36849617
Glutamine supports pancreatic cancer growth through a KRAS-regulated metabolic pathway.Q36850905
Adaptive landscapes and emergent phenotypes: why do cancers have high glycolysis?Q36877059
Hypoxic and Ras-transformed cells support growth by scavenging unsaturated fatty acids from lysophospholipidsQ36895786
Prodrugs of nucleoside analogues for improved oral absorption and tissue targetingQ36909036
Rhabdomyosarcoma cells show an energy producing anabolic metabolic phenotype compared with primary myocytes.Q36960665
HIF-alpha effects on c-Myc distinguish two subtypes of sporadic VHL-deficient clear cell renal carcinomaQ37052897
Nucleotide Deficiency Promotes Genomic Instability in Early Stages of Cancer DevelopmentQ37087191
Regulation of purine biosynthesis and turnoverQ37159058
Prospects for clinical cancer metabolomics using stable isotope tracersQ37201287
Altered regulation of metabolic pathways in human lung cancer discerned by (13)C stable isotope-resolved metabolomics (SIRM)Q37281258
The role of HIF prolyl hydroxylases in tumour growth.Q37295254
The purinosome, a multi-protein complex involved in the de novo biosynthesis of purines in humansQ37424854
c-Myc activates multiple metabolic networks to generate substrates for cell-cycle entryQ37427003
MYC-induced cancer cell energy metabolism and therapeutic opportunitiesQ37438881
Control of glutamine metabolism by the tumor suppressor Rb.Q37571643
Contribution of serine, folate and glycine metabolism to the ATP, NADPH and purine requirements of cancer cellsQ37577449
Targeting metabolic transformation for cancer therapy.Q37714309
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Cancer cell metabolism: one hallmark, many faces.Q38046274
The human concentrative and equilibrative nucleoside transporter families, SLC28 and SLC29.Q38090786
Glycine metabolism in animals and humans: implications for nutrition and healthQ38101481
Advances in the development of nucleoside and nucleotide analogues for cancer and viral diseases.Q38110693
The functional logic of cytosolic 5'-nucleotidasesQ38132866
Poly(ADP-ribosyl)ation in regulation of chromatin structure and the DNA damage responseQ38155805
NAD biosynthesis in humans--enzymes, metabolites and therapeutic aspectsQ38156477
Cellular regulation of ribonucleotide reductase in eukaryotesQ38202401
The hepatocyte. Development, differentiation, and ageingQ38213538
Perinuclear Mitochondrial Clustering Creates an Oxidant-Rich Nuclear Domain Required for Hypoxia-Induced TranscriptionQ38323862
Protein and nucleotide biosynthesis are coupled by a single rate-limiting enzyme, PRPS2, to drive cancerQ38992372
Explaining the enigmatic KM for oxygen in cytochrome c oxidase: A kinetic modelQ51616888
Metabolic control and compartmentation in single living cellsQ52707005
Bioenergetics of human peripheral blood mononuclear cell metabolism in quiescent, activated, and glucocorticoid-treated statesQ52968093
ATP-producing and consuming processes of Ehrlich mouse ascites tumor cells in proliferating and resting phasesQ53029816
Serine, but not glycine, supports one-carbon metabolism and proliferation of cancer cells.Q53052028
Antisense glutaminase inhibition modifies the O-GlcNAc pattern and flux through the hexosamine pathway in breast cancer cells.Q53542689
Mechanism of the physiological reaction catalyzed by tryptophan synthase from Escherichia coli.Q54701750
The role of multiple enzyme activation in metabolic flux controlQ58744508
Human IMP dehydrogenase. Kinetics and regulatory propertiesQ68699786
Human adenylosuccinate synthetase. Partial purification, kinetic and regulatory properties of the enzyme from placentaQ68844246
Metabolism of pyrimidine bases and nucleosides by pyrimidine-nucleoside phosphorylases in cultured human lymphoid cellsQ68983916
Cell cycle-dependent expression of mammalian ribonucleotide reductase. Differential regulation of the two subunitsQ69900353
Energy metabolism in tumor cellsQ28288377
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Leflunomide: A Drug with a Potential Beyond RheumatologyQ28294236
Glutamine PRPP amidotransferase: snapshots of an enzyme in actionQ28294777
The origin, evolution and proposed stabilization of the terms 'genome size' and 'C-value' to describe nuclear DNA contentsQ28298127
HIF-1-mediated expression of pyruvate dehydrogenase kinase: a metabolic switch required for cellular adaptation to hypoxiaQ28300406
Regulation of cancer cell metabolismQ28303890
Glucose-independent glutamine metabolism via TCA cycling for proliferation and survival in B cellsQ28504783
Metabolic Reprogramming for Producing Energy and Reducing Power in Fumarate Hydratase Null Cells from Hereditary Leiomyomatosis Renal Cell CarcinomaQ28535371
Regulation of carbamoyl phosphate synthetase by MAP kinaseQ28578262
The oncogene c-Myc coordinates regulation of metabolic networks to enable rapid cell cycle entryQ28580062
Revisiting and revising the purinosomeQ28656168
The biology of cancer: metabolic reprogramming fuels cell growth and proliferationQ29547301
Landscape of transcription in human cellsQ29547467
Aerobic glycolysis: meeting the metabolic requirements of cell proliferationQ29615178
Myc regulates a transcriptional program that stimulates mitochondrial glutaminolysis and leads to glutamine addictionQ29616653
Physiological concentrations of purines and pyrimidinesQ29616721
c-Myc suppression of miR-23a/b enhances mitochondrial glutaminase expression and glutamine metabolismQ29617213
Otto Warburg's contributions to current concepts of cancer metabolismQ29617601
Beyond aerobic glycolysis: transformed cells can engage in glutamine metabolism that exceeds the requirement for protein and nucleotide synthesisQ29617613
Ribonucleotide reductasesQ29620027
An overview of cytidine deaminasesQ31041934
Spatial heterogeneity and oxygen dependence of glucose consumption in R3230Ac and fibrosarcomas of the Fischer 344 rat.Q33217203
Global identification of Myc target genes reveals its direct role in mitochondrial biogenesis and its E-box usage in vivoQ33323393
Global regulation of nucleotide biosynthetic genes by c-MycQ33352002
Q's next: the diverse functions of glutamine in metabolism, cell biology and cancerQ33604129
Mass isotopomer distribution analysis at eight years: theoretical, analytic, and experimental considerationsQ33654282
Modulation of RNA function by aminoglycoside antibioticsQ33808338
Alterations in the glycolytic and glutaminolytic pathways after malignant transformation of rat liver oval cellsQ33871773
An introduction to the use of tracers in nutrition and metabolismQ33902310
Comparison of the electrophoretic and hydrodynamic properties of DNA and RNA oligonucleotide duplexesQ33907436
A novel deconvolution method for modeling UDP-N-acetyl-D-glucosamine biosynthetic pathways based on (13)C mass isotopologue profiles under non-steady-state conditionsQ33917561
Quantitative flux analysis reveals folate-dependent NADPH production.Q33924205
Tracing compartmentalized NADPH metabolism in the cytosol and mitochondria of mammalian cellsQ33930109
FTIR spectroscopy demonstrates biochemical differences in mammalian cell cultures at different growth stagesQ34182760
Functional genomics reveal that the serine synthesis pathway is essential in breast cancerQ34200610
Haem oxygenase is synthetically lethal with the tumour suppressor fumarate hydrataseQ34208791
The metabolic demands of cancer cells are coupled to their size and protein synthesis ratesQ34258905
Glycolysis, glutaminolysis and cell proliferationQ34268269
Investigation of the mechanism of phosphoribosylamine transfer from glutamine phosphoribosylpyrophosphate amidotransferase to glycinamide ribonucleotide synthetaseQ34293300
Transcriptional amplification in tumor cells with elevated c-Myc.Q34302542
Band 3/complement-mediated recognition and removal of normally senescent and pathological human erythrocytesQ34469434
Amino acid transport across mammalian intestinal and renal epitheliaQ34736025
Direct role of nucleotide metabolism in C-MYC-dependent proliferation of melanoma cellsQ34803825
Direct measurement of oxygen consumption rates from attached and unattached cells in a reversibly sealed, diffusionally isolated sample chamberQ34908778
NMR-based stable isotope resolved metabolomics in systems biochemistryQ34921472
The molecular determinants of de novo nucleotide biosynthesis in cancer cellsQ34939794
Pyruvate carboxylase is required for glutamine-independent growth of tumor cellsQ35008346
Stable isotope resolved metabolomics of lung cancer in a SCID mouse modelQ35030808
Stable Isotope-Resolved Metabolomics (SIRM) in Cancer Research with Clinical Application to NonSmall Cell Lung CancerQ35075007
Stable isotope-labeled tracers for metabolic pathway elucidation by GC-MS and FT-MS.Q35109445
Metabolic pathways in the post-genome era.Q35135595
Long-term synthesis rates of skeletal muscle DNA and protein are higher during aerobic training in older humans than in sedentary young subjects but are not altered by protein supplementationQ35169483
Dependence of mouse embryonic stem cells on threonine catabolismQ35216662
Reduced Level of Ribonucleotide Reductase R2 Subunits Increases Dependence on Homologous Recombination Repair of Cisplatin-Induced DNA DamageQ35586061
Hypoxia promotes isocitrate dehydrogenase-dependent carboxylation of α-ketoglutarate to citrate to support cell growth and viabilityQ35621293
Molecular basis for the differential use of glucose and glutamine in cell proliferation as revealed by synchronized HeLa cells.Q35641497
Reductive carboxylation supports growth in tumour cells with defective mitochondria.Q35683311
Measurement of cell proliferation by labeling of DNA with stable isotope-labeled glucose: Studies in vitro , in animals, and in humansQ35743125
Mammalian pyrimidine biosynthesis: fresh insights into an ancient pathwayQ35750835
The metabolic profile of tumors depends on both the responsible genetic lesion and tissue type.Q35764439
Stable Isotope Resolved Metabolomics Analysis of Ribonucleotide and RNA Metabolism in Human Lung Cancer CellsQ35801072
Ribosomal RNA processing and ribosome biogenesis in eukaryotesQ35951083
Reprogramming of proline and glutamine metabolism contributes to the proliferative and metabolic responses regulated by oncogenic transcription factor c-MYCQ36061545
Role in tumor growth of a glycogen debranching enzyme lost in glycogen storage disease.Q36087194
Metabolism of [U‐13C]glucose in human brain tumors in vivoQ36120642
Oncogenic Kras maintains pancreatic tumors through regulation of anabolic glucose metabolismQ36319414
Identification of cancer mechanisms through computational systems modelingQ36357667
Necrotic death as a cell fateQ36359618
Nucleoside salvage pathway kinases regulate hematopoiesis by linking nucleotide metabolism with replication stressQ36408993
Energy management by enhanced glycolysis in G1-phase in human colon cancer cells in vitro and in vivoQ39143359
Glioblastoma cells require glutamate dehydrogenase to survive impairments of glucose metabolism or Akt signalingQ39787798
Glutamine metabolism in lymphocytes: its biochemical, physiological and clinical importanceQ39837919
Quantitation of cellular deoxynucleoside triphosphatesQ39843396
The phosphatidylinositol 3-kinase/akt cassette regulates purine nucleotide synthesisQ39907104
The pervasive presence of fluctuating oxygenation in tumorsQ39960720
The oncoprotein H-RasV12 increases mitochondrial metabolismQ40041752
Isotopomer-based metabolomic analysis by NMR and mass spectrometryQ40061257
Mechanism of the Prolyl Hydroxylase Reaction. 2. Kinetic Analysis of the Reaction SequenceQ40111392
Phospholipids are synthesized in the G2/M phase of the cell cycleQ40206751
Pentose phosphate cycle oxidative and nonoxidative balance: A new vulnerable target for overcoming drug resistance in cancerQ40223808
Multiparameter metabolic analysis reveals a close link between attenuated mitochondrial bioenergetic function and enhanced glycolysis dependency in human tumor cellsQ40232298
Decoding key nodes in the metabolism of cancer cells: sugar & spice and all things niceQ40300001
Gemcitabine: metabolism, mechanisms of action, and self-potentiation.Q40371567
13C NMR analysis reveals a link between L-glutamine metabolism, D-glucose metabolism and gamma-glutamyl cycle activity in a clonal pancreatic beta-cell line.Q40637734
Cell cycle-dependent regulation of pyrimidine biosynthesisQ40689222
Contribution by different fuels and metabolic pathways to the total ATP turnover of proliferating MCF-7 breast cancer cells.Q40734573
The rate of cell growth is regulated by purine biosynthesis via ATP production and G(1) to S phase transitionQ40870453
Intracellular ATP levels determine cell death fate by apoptosis or necrosis.Q41110278
Nucleotide pools in Novikoff rat hepatoma cells growing in suspension culture. 3. Effects of nucleosides in medium on levels of nucleotides in separate nucleotide pools for nuclear and cytoplasmic RNA synthesisQ41152200
The analysis of metabolite channelling in multienzyme complexes and multifunctional proteinsQ42010950
c-Myc depletion inhibits proliferation of human tumor cells at various stages of the cell cycleQ42115767
Analysis of tumor metabolism reveals mitochondrial glucose oxidation in genetically diverse human glioblastomas in the mouse brain in vivoQ42198162
High information throughput analysis of nucleotides and their isotopically enriched isotopologues by direct-infusion FTICR-MS.Q42410693
Small inhibitory RNA duplexes for Sp1 mRNA block basal and estrogen-induced gene expression and cell cycle progression in MCF-7 breast cancer cellsQ42522132
Glutaminolysis and insulin secretion: from bedside to bench and backQ42528599
Dynamic profiling of the glucose metabolic network in fasted rat hepatocytes using [1,2-13C2]glucoseQ42622750
Overexpression of the Mitochondrial Folate and Glycine–Serine Pathway: A New Determinant of Methotrexate Selectivity in TumorsQ42722444
K-ras codon-specific mutations produce distinctive metabolic phenotypes in NIH3T3 mice [corrected] fibroblastsQ42812919
A hierarchy of ATP-consuming processes in mammalian cellsQ42822664
13C-pyruvate imaging reveals alterations in glycolysis that precede c-Myc-induced tumor formation and regressionQ42822782
Gleevec (STI571) influences metabolic enzyme activities and glucose carbon flow toward nucleic acid and fatty acid synthesis in myeloid tumor cells.Q43699000
Advances in the Stable Isotope–Mass Spectrometric Measurement of DNA Synthesis and Cell ProliferationQ43793875
Measurements of ATP in mammalian cellsQ44021176
Differential Control of Cell Cycle, Proliferation, and Survival of Primary T Lymphocytes by Purine and Pyrimidine NucleotidesQ44432122
Estrogen receptor/Sp1 complexes are required for induction of cad gene expression by 17beta-estradiol in breast cancer cellsQ44440498
Intracellular ATP is required for mitochondrial apoptotic pathways in isolated hypoxic rat cardiac myocytesQ44543591
A c-Myc-MicroRNA functional feedback loop affects hepatocarcinogenesisQ44714902
Breakdown of the regulatory control of pyrimidine biosynthesis in human breast cancer cellsQ44781008
Compartmentation of glycolysis and glycogenolysis in the perfused rat heartQ44820827
Quantitation of erythrocyte pentose pathway flux with [2-13C]glucose and 1H NMR analysis of the lactate methyl signalQ44916241
The anti-inflammatory action of methotrexate is not mediated by lymphocyte apoptosis, but by the suppression of activation and adhesion moleculesQ45216641
Abnormalities in glucose uptake and metabolism in imatinib-resistant human BCR-ABL-positive cells.Q46033036
Mass isotopomer study of the nonoxidative pathways of the pentose cycle with [1,2-13C2]glucose.Q46119052
Elevated activity of the oxidative and non-oxidative pentose phosphate pathway in (pre)neoplastic lesions in rat liver.Q46636561
Revisiting the 13C-label distribution of the non-oxidative branch of the pentose phosphate pathway based upon kinetic and genetic evidenceQ46714527
Metabolic profiling by 13C-NMR spectroscopy: [1,2-13C2]glucose reveals a heterogeneous metabolism in human leukemia T cellsQ46855250
Cell cycle regulation of purine synthesis by phosphoribosyl pyrophosphate and inorganic phosphateQ46867283
Dual binding mode of a novel series of DHODH inhibitors.Q46945934
The separation of normal human leukocytes by density and classification by sizeQ47393393
5 The determination of the partial specific volume of proteins by the mechanical oscillator techniqueQ47906030
The phosphorylation potential generated by respiring mitochondriaQ47997872
Relationships between the rate of synthesis of ATP and the concentrations of reactants and products of ATP hydrolysis in maize root tips, determined by 31P nuclear magnetic resonanceQ49218604
Regulation and mechanism of phosphoribosylpyrophosphate synthetase. V. Inhibition by end products and regulation by adenosine diphosphate.Q50235337
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue4
P407language of work or nameEnglishQ1860
P921main subjectcarbohydrateQ11358
nucleotideQ28745
P304page(s)2466-2485
P577publication date2015-01-27
2015-02-27
P1433published inNucleic Acids ResearchQ135122
P1476titleRegulation of mammalian nucleotide metabolism and biosynthesis
P478volume43

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Q33584831Population effect model identifies gene expression predictors of survival outcomes in lung adenocarcinoma for both Caucasian and Asian patients
Q55009808Preclinical evaluation of novel fatty acid synthase inhibitors in primary colorectal cancer cells and a patient-derived xenograft model of colorectal cancer.
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