Reorganization of gene network for degradation of polycyclic aromatic hydrocarbons (PAHs) in Pseudomonas aeruginosa PAO1 under several conditions

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Reorganization of gene network for degradation of polycyclic aromatic hydrocarbons (PAHs) in Pseudomonas aeruginosa PAO1 under several conditions is …
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scholarly articleQ13442814

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P356DOI10.1007/S13353-017-0402-9
P932PMC publication ID5655620
P698PubMed publication ID28685384

P50authorShaomin YanQ38358974
Guang WuQ38358988
P2860cites workKEGG: kyoto encyclopedia of genes and genomesQ24515297
Data, information, knowledge and principle: back to metabolism in KEGGQ24568332
NCBI GEO: archive for functional genomics data sets--updateQ24595691
Pseudomonas Genome Database: improved comparative analysis and population genomics capability for Pseudomonas genomesQ24609340
Photomutagenicity of 16 polycyclic aromatic hydrocarbons from the US EPA priority pollutant listQ24646905
Degradation of alkyl methyl ketones by Pseudomonas veronii MEK700Q24678484
Role of oxidants in microbial pathophysiologyQ24683780
Microarray analysis of Pseudomonas aeruginosa reveals induction of pyocin genes in response to hydrogen peroxideQ24816990
Systems analysis of high-throughput dataQ27023883
Gene Expression Omnibus: NCBI gene expression and hybridization array data repositoryQ27860523
Effect of particles of ashes produced from sugarcane burning on the respiratory system of rats.Q51678548
Phenanthrene degradation in Arthrobacter sp. P1-1: initial 1,2-, 3,4- and 9,10-dioxygenation, and meta- and ortho-cleavages of naphthalene-1,2-diol after its formation from naphthalene-1,2-dicarboxylic acid and hydroxyl naphthoic acids.Q53617822
Transcriptome analyses and biofilm-forming characteristics of a clonal Pseudomonas aeruginosa from the cystic fibrosis lungQ58056362
Genomic sequence and analysis of the atypical temperate bacteriophage N15 1 1Edited by M. GottesmanQ58199943
Genetics of naphthalene and phenanthrene degradation by Comamonas testosteroniQ74126761
Comparative global transcription analysis of sodium hypochlorite, peracetic acid, and hydrogen peroxide on Pseudomonas aeruginosaQ80597389
4-Hydroxyacetophenone monooxygenase from Pseudomonas fluorescens ACB. A novel flavoprotein catalyzing Baeyer-Villiger oxidation of aromatic compoundsQ28185572
A novel catabolic activity of Pseudomonas veronii in biotransformation of pentachlorophenolQ28190060
Gene PA2449 is essential for glycine metabolism and pyocyanin biosynthesis in Pseudomonas aeruginosa PAO1Q28493046
Role of the Pseudomonas aeruginosa oxyR-recG operon in oxidative stress defense and DNA repair: OxyR-dependent regulation of katB-ankB, ahpB, and ahpC-ahpFQ28493073
A polyomic approach to elucidate the fluoranthene-degradative pathway in Mycobacterium vanbaalenii PYR-1Q28757441
Complete and integrated pyrene degradation pathway in Mycobacterium vanbaalenii PYR-1 based on systems biologyQ28763612
Analysis of the Pseudomonas aeruginosa regulon controlled by the sensor kinase KinB and sigma factor RpoN.Q30425189
Biochemical and molecular characterization of 1-hydroxy-2-naphthoate dioxygenase from Nocardioides sp. KP7.Q32076788
Physiological heterogeneity in biofilmsQ33319084
Toxicogenomic response of Pseudomonas aeruginosa to ortho-phenylphenolQ33375185
Biodegradation of high-molecular-weight polycyclic aromatic hydrocarbons by bacteriaQ33874449
Enzymatic "combustion": the microbial degradation of ligninQ34049571
Siderophore-mediated signaling regulates virulence factor production in PseudomonasaeruginosaQ34068419
Organization and transcriptional characterization of catechol degradation genes involved in carbazole degradation by Pseudomonas resinovorans strain CA10.Q34130691
Pleiotropic and epistatic behavior of a ring-hydroxylating oxygenase system in the polycyclic aromatic hydrocarbon metabolic network from Mycobacterium vanbaalenii PYR-1.Q34297766
Elucidating severe urban haze formation in ChinaQ34709323
Natural selection of PAH-degrading bacterial guilds at coal-tar disposal sitesQ34838474
The hierarchy quorum sensing network in Pseudomonas aeruginosaQ34864770
Genome Sequence of Sphingobium yanoikuyae B1, a Polycyclic Aromatic Hydrocarbon-Degrading StrainQ35057238
Essential O2-responsive genes of Pseudomonas aeruginosa and their network revealed by integrating dynamic data from inverted conditionsQ35084943
Isolation and characterization of a fluoranthene-utilizing strain of Pseudomonas paucimobilisQ35737351
Contribution of stress responses to antibiotic tolerance in Pseudomonas aeruginosa biofilmsQ35746192
The SXT conjugative element and linear prophage N15 encode toxin-antitoxin-stabilizing systems homologous to the tad-ata module of the Paracoccus aminophilus plasmid pAMI2.Q35759454
Heterogeneity in Pseudomonas aeruginosa biofilms includes expression of ribosome hibernation factors in the antibiotic-tolerant subpopulation and hypoxia-induced stress response in the metabolically active populationQ35867693
Metabolism of naphthalene, fluorene, and phenanthrene: preliminary characterization of a cloned gene cluster from Pseudomonas putida NCIB 9816Q36106630
Cloning, sequencing, and expression of the Pseudomonas putida protocatechuate 3,4-dioxygenase genesQ36122732
Genome sequence of Pseudomonas aeruginosa strain SJTD-1, a bacterium capable of degrading long-chain alkanes and crude oil.Q36152834
Genome sequence of Pseudomonas aeruginosa DQ8, an efficient degrader of n-alkanes and polycyclic aromatic hydrocarbonsQ36363605
KEGG as a reference resource for gene and protein annotationQ36434599
Enhanced annotations and features for comparing thousands of Pseudomonas genomes in the Pseudomonas genome database.Q36434832
Microbial biodegradation of polyaromatic hydrocarbonsQ37228802
Anaerobic degradation of polycyclic aromatic hydrocarbons.Q37588092
Solution by dilution?--A review on the pollution status of the Yangtze RiverQ38100938
Expression stability of six housekeeping genes: A proposal for resistance gene quantification studies of Pseudomonas aeruginosa by real-time quantitative RT-PCR.Q38355163
Gene expression characteristics of a cystic fibrosis epidemic strain of Pseudomonas aeruginosa during biofilm and planktonic growthQ38356556
Polycyclic aromatic hydrocarbon-degrading capabilities of Phanerochaete laevis HHB-1625 and its extracellular ligninolytic enzymesQ39799754
Expression of lip genes during growth in soil and oxidation of anthracene by Phanerochaete chrysosporiumQ39800788
NAH plasmid-mediated catabolism of anthracene and phenanthrene to naphthoic acidsQ39857833
Phenanthrene-degrading phenotype of Alcaligenes faecalis AFK2.Q40069790
Transcriptome analysis of the response of Pseudomonas aeruginosa to hydrogen peroxideQ40377337
Biotransformations catalyzed by the genus Rhodococcus.Q40754546
Fungal metabolism of polycyclic aromatic hydrocarbons: past, present and future applications in bioremediationQ40871224
Draft Genome Sequence of Petroleum Hydrocarbon-Degrading Pseudomonas aeruginosa Strain PK6, Isolated from the Saurashtra Region of Gujarat, IndiaQ41925272
Web-type evolution of rhodococcus gene clusters associated with utilization of naphthalene.Q42206390
NIH's Big Data to Knowledge initiative and the advancement of biomedical informaticsQ42433061
Complete nucleotide sequence and evolutionary significance of a chromosomally encoded naphthalene-degradation lower pathway from Pseudomonas stutzeri AN10.Q42621286
Purification and characterization of a salicylate hydroxylase involved in 1-hydroxy-2-naphthoic acid hydroxylation from the naphthalene and phenanthrene-degrading bacterial strain Pseudomonas putida BS202-P1.Q43876122
Fluoranthene degradation in Pseudomonas alcaligenes PA-10.Q44018812
Phthalate catabolic gene cluster is linked to the angular dioxygenase gene in Terrabacter sp. strain DBF63.Q44377315
Manganese-lignin peroxidase hybrid from Bjerkandera adusta oxidizes polycyclic aromatic hydrocarbons more actively in the absence of manganeseQ44736162
The Pseudomonas aeruginosa RpoS regulon and its relationship to quorum sensing.Q44756516
Complete nucleotide sequence and organization of the naphthalene catabolic plasmid pND6-1 from Pseudomonas sp. strain ND6.Q44972467
Response of PAH-degrading genes to PAH bioavailability in the overlying water, suspended sediment, and deposited sediment of the Yangtze RiverQ46203628
Structural and replicative diversity of large plasmids from sphingomonads that degrade polycyclic aromatic compounds and xenobioticsQ46533408
Degradation of phenanthrene by Burkholderia sp. C3: initial 1,2- and 3,4-dioxygenation and meta- and ortho-cleavage of naphthalene-1,2-diolQ46954795
Cloning and characterization of a novel cis-naphthalene dihydrodiol dehydrogenase gene (narB) from Rhodococcus sp. NCIMB12038.Q47894909
Conserved and hybrid meta-cleavage operons from PAH-degrading Burkholderia RP007.Q47937589
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue4
P921main subjectPseudomonas aeruginosaQ31856
polycyclic aromatic hydrocarbonsQ407212
P304page(s)545-563
P577publication date2017-07-07
P1433published inJournal of Applied GeneticsQ15767059
P1476titleReorganization of gene network for degradation of polycyclic aromatic hydrocarbons (PAHs) in Pseudomonas aeruginosa PAO1 under several conditions
P478volume58

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