Survival guide: Escherichia coli in the stationary phase

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Survival guide: Escherichia coli in the stationary phase is …
instance of (P31):
scholarly articleQ13442814

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P932PMC publication ID4717247
P698PubMed publication ID26798489

P2093author name stringA Bogdanov
I Osterman
O Dontsova
P Pletnev
P Sergiev
P2860cites workDps protects cells against multiple stresses during stationary phaseQ24564681
DsrA RNA regulates translation of RpoS message by an anti-antisense mechanism, independent of its action as an antisilencer of transcriptionQ24645477
A trans-acting RNA as a control switch in Escherichia coli: DsrA modulates function by forming alternative structuresQ24652762
Regulation of sigma factor competition by the alarmone ppGppQ24675316
Decoding in the Absence of a Codon by tmRNA and SmpB in the RibosomeQ27678061
How Hibernation Factors RMF, HPF, and YfiA Turn Off Protein SynthesisQ27679167
Regulation and mode of action of the second small RNA activator of RpoS translation, RprAQ28212671
A common mechanism of cellular death induced by bactericidal antibioticsQ28246128
Micros for microbes: non-coding regulatory RNAs in bacteriaQ28252632
Conserved small non-coding RNAs that belong to the sigmaE regulon: role in down-regulation of outer membrane proteinsQ28265898
Complex of transfer-messenger RNA and elongation factor Tu. Unexpected modes of interactionQ30733465
Mechanism of regulation of transcription initiation by ppGpp. I. Effects of ppGpp on transcription initiation in vivo and in vitroQ31852675
Escherichia coli MazF leads to the simultaneous selective synthesis of both "death proteins" and "survival proteins".Q33417628
Prolonged stationary-phase incubation selects for lrp mutations in Escherichia coli K-12Q33603147
Growth phase-dependent variation in protein composition of the Escherichia coli nucleoidQ33638020
Active starvation responses mediate antibiotic tolerance in biofilms and nutrient-limited bacteriaQ33716417
Secondary sigma factor controls transcription of flagellar and chemotaxis genes in Escherichia coliQ33834188
DNA protection by stress-induced biocrystallizationQ33867772
The OxyS regulatory RNA represses rpoS translation and binds the Hfq (HF-I) proteinQ33889724
Functional modulation of Escherichia coli RNA polymeraseQ33920172
Lessons from Escherichia coli genes similarly regulated in response to nitrogen and sulfur limitationQ33927430
A novel DNA-binding protein with regulatory and protective roles in starved Escherichia coliQ33969406
Transcriptional organization and in vivo role of the Escherichia coli rsd gene, encoding the regulator of RNA polymerase sigma D.Q33992336
Adaptation to famine: a family of stationary-phase genes revealed by microarray analysisQ34159691
The RNA-binding protein HF-I, known as a host factor for phage Qbeta RNA replication, is essential for rpoS translation in Escherichia coliQ34383062
The bacterial translation stress response.Q34490409
Transcription of glnA by purified Escherichia coli components: core RNA polymerase and the products of glnF, glnG, and glnL.Q34558465
Modulating RssB activity: IraP, a novel regulator of sigma(S) stability in Escherichia coliQ34649165
Modes of regulation of RpoS by H-NSQ35075713
In vitro transcription profiling of the σS subunit of bacterial RNA polymerase: re-definition of the σS regulon and identification of σS-specific promoter sequence elementsQ35120775
Single-molecule investigations of the stringent response machinery in living bacterial cellsQ35149470
6S RNA function enhances long-term cell survivalQ35892783
Stationary-phase physiologyQ35919834
Synthesis of the stationary-phase sigma factor sigma s is positively regulated by ppGppQ36124805
Long-term survival during stationary phase: evolution and the GASP phenotypeQ36369839
Non-inherited antibiotic resistance.Q36508695
The architectural role of nucleoid-associated proteins in the organization of bacterial chromatin: a molecular perspective.Q36552500
Studies on a mutant of Escherichia coli with unbalanced ribonucleic acid synthesisQ36625243
The leucine-responsive regulatory protein, a global regulator of metabolism in Escherichia coli.Q37060435
Signals of growth regulation in bacteriaQ37461543
Stationary phase in gram-negative bacteria.Q37710717
Selective translation during stress in Escherichia coliQ38039740
Bacterial lifestyle shapes stringent response activationQ38082556
The DNA binding protein H-NS binds to and alters the stability of RNA in vitro and in vivoQ38341060
Promoter substitution and deletion analysis of upstream region required for rpoS translational regulation.Q39567505
A two-component phosphotransfer network involving ArcB, ArcA, and RssB coordinates synthesis and proteolysis of sigmaS (RpoS) in E. coliQ39705576
Analysis of cell size and DNA content in exponentially growing and stationary-phase batch cultures of Escherichia coliQ39839306
Regulation of Escherichia coli starvation sigma factor (sigma s) by ClpXP proteaseQ39839940
The regulation of transcription initiation in bacteriaQ39850560
Role of protein degradation in the survival of carbon-starved Escherichia coli and Salmonella typhimuriumQ39967918
Genome-wide analysis of the general stress response network in Escherichia coli: sigmaS-dependent genes, promoters, and sigma factor selectivityQ41863185
Dimerization and DNA-dependent aggregation of the Escherichia coli nucleoid protein and chaperone CbpA.Q42409258
Control of spoT-dependent ppGpp synthesis and degradation in Escherichia coliQ42518408
Stationary phase reorganisation of the Escherichia coli transcription machinery by Crl protein, a fine-tuner of sigmas activity and levelsQ42911897
Single-cell and population lag times as a function of cell age.Q42938832
Iron incorporation into Escherichia coli Dps gives rise to a ferritin-like microcrystalline coreQ44090729
The sigma S level in starving Escherichia coli cells increases solely as a result of its increased stability, despite decreased synthesis.Q45960243
Role of the spacer between the -35 and -10 regions in sigmas promoter selectivity in Escherichia coliQ46899395
Transcription of the region encoding the ferric dicitrate-transport system in Escherichia coli: similarity between promoters for fecA and for extracytoplasmic function sigma factorsQ48070545
Genomics of DNA cytosine methylation in Escherichia coli reveals its role in stationary phase transcriptionQ48526067
Characterization of the interactions within the mazEF addiction module of Escherichia coli.Q52282527
Ribosome rescue by Escherichia coli ArfA (YhdL) in the absence of trans-translation systemQ52604997
Escherichia coli YaeJ protein mediates a novel ribosome-rescue pathway distinct from SsrA- and ArfA-mediated pathways.Q54365117
Poly(A)-polymerase I links transcription with mRNA degradation via sigmaS proteolysis.Q54468287
The gene bolA regulates dacA (PBP5), dacC (PBP6) and ampC (AmpC), promoting normal morphology in Escherichia coli.Q54537439
The cellular concentration of the sigma S subunit of RNA polymerase in Escherichia coli is controlled at the levels of transcription, translation, and protein stabilityQ54631609
The heat shock response of E. coli is regulated by changes in the concentration of σ32Q59067218
The control of ribonucleic acid synthesis in Escherichia coli. V. Characterization of a nucleotide associated with the stringent responseQ68608942
Transcriptional induction of the conserved alternative sigma factor RpoS in Escherichia coli is dependent on BarA, a probable two-component regulatorQ74130059
Promoter recognition and discrimination by EsigmaS RNA polymeraseQ77333834
P433issue4
P921main subjectEscherichia coliQ25419
P304page(s)22-33
P577publication date2015-10-01
P1433published inActa NaturaeQ27723435
P1476titleSurvival guide: Escherichia coli in the stationary phase
P478volume7

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