Creation of genomic methylation patterns

scientific article published on April 1996

Creation of genomic methylation patterns is …
instance of (P31):
scholarly articleQ13442814
review articleQ7318358

External links are
P6179Dimensions Publication ID1032800066
P356DOI10.1038/NG0496-363
P698PubMed publication ID8630488

P2093author name stringBestor TH
Tycko B
P2860cites workSomatic mutations in the neurofibromatosis 1 gene in human tumorsQ24293243
A genetic map of the mouse with 4,006 simple sequence length polymorphismsQ72702943
Epigenetic lesions at the H19 locus in Wilms' tumour patientsQ72703033
Cytosine methylation: the pros and cons of DNA methylationQ80505282
Chemistry. How are alkynes scrambled?Q95780598
The crystal structure of Haelll methyltransferase covalently complexed to DNA: An extrahelical cytosine and rearranged base pairingQ27729758
Targeted mutation of the DNA methyltransferase gene results in embryonic lethalityQ28131773
Polymerase chain reaction-aided genomic sequencing of an X chromosome-linked CpG island: methylation patterns suggest clonal inheritance, CpG site autonomy, and an explanation of activity state stabilityQ33859871
X inactivation, differentiation, and DNA methylationQ33999850
Silencing of the E-cadherin invasion-suppressor gene by CpG methylation in human carcinomasQ34053843
Premeiotic instability of repeated sequences in Neurospora crassaQ34179760
Unity in transposition reactionsQ34296425
Hairpins are formed by the single DNA strands of the fragile X triplet repeats: structure and biological implicationsQ34297548
Inherited microdeletions in the Angelman and Prader-Willi syndromes define an imprinting centre on human chromosome 15.Q34314269
Differential expression of a new dominant agouti allele (Aiapy) is correlated with methylation state and is influenced by parental lineageQ34323420
Methylation and imprinting: from host defense to gene regulation?Q34363070
HhaI and HpaII DNA methyltransferases bind DNA mismatches, methylate uracil and block DNA repairQ34746885
CGG repeats associated with DNA instability and chromosome fragility form structures that block DNA synthesis in vitroQ34777507
Lack of expression from a retroviral vector after transduction of murine hematopoietic stem cells is associated with methylation in vivoQ35123124
Inactivation of gene expression in plants as a consequence of specific sequence duplicationQ35179456
Silencing of the VHL tumor-suppressor gene by DNA methylation in renal carcinomaQ35807817
Duplication-targeted DNA methylation and mutagenesis in the evolution of eukaryotic chromosomesQ36819409
DNA methylation: evolution of a bacterial immune function into a regulator of gene expression and genome structure in higher eukaryotesQ37581127
Alu repeated DNAs are differentially methylated in primate germ cellsQ37587525
Treatment of mice with 5-azacytidine efficiently activates silent retroviral genomes in different tissuesQ37679466
Genomic imprinting of p57KIP2, a cyclin-dependent kinase inhibitor, in mouseQ38291049
Sp1 sites in the mouse aprt gene promoter are required to prevent methylation of the CpG islandQ38303631
CpG methylation of the cAMP-responsive enhancer/promoter sequence TGACGTCA abolishes specific factor binding as well as transcriptional activationQ38344762
Origins of replication and gene regulationQ38581104
M.HhaI binds tightly to substrates containing mismatches at the target baseQ40393755
Gene number, noise reduction and biological complexityQ40514856
Supercoiling-dependent sequence specificity of mammalian DNA methyltransferaseQ40566620
Homology-dependent gene silencing in transgenic plants: what does it really tell us?Q40617697
DNA methyltransferasesQ40626444
It was a very good year for DNA repairQ40804105
DNA methylation, genomic imprinting, and mammalian developmentQ41586860
Sp1 elements protect a CpG island from de novo methylationQ42497349
Specific Alu Binding Protein from Human Sperm Chromatin Prevents DNA MethylationQ46112192
Epigenetic control of an endogenous gene family is revealed by a novel blue fluorescent mutant of ArabidopsisQ48069018
Long-range cis preference in DNA homology search over the length of a Drosophila chromosome.Q52543161
Epigenetic repeat-induced gene silencing (RIGS) in Arabidopsis.Q54231411
Homology-dependent gene silencing in transgenic plants: epistatic silencing loci contain multiple copies of methylated transgenesQ57756646
The evolutionary dynamics of repetitive DNA in eukaryotesQ59090793
Regulated Synthesis and Localization of DNA Methyltransferase during Spermatogenesis1Q71787806
Perpetuation of cytosine methylation in Ascobolus immersus implies a novel type of maintenance methylaseQ72038617
P433issue4
P407language of work or nameEnglishQ1860
P304page(s)363-367
P577publication date1996-04-01
P1433published inNature GeneticsQ976454
P1476titleCreation of genomic methylation patterns
P478volume12

Reverse relations

cites work (P2860)
Q345811493-D DNA methylation phenotypes correlate with cytotoxicity levels in prostate and liver cancer cell models
Q43206574A DNA target of 30 bp is sufficient for RNA-directed DNA methylation.
Q56783008A Genome-Wide Screen for Normally Methylated Human CpG Islands That Can Identify Novel Imprinted Genes
Q33872587A LINE-1 component to human aging: do LINE elements exact a longevity cost for evolutionary advantage?
Q35033574A dominant modifier of transgene methylation is mapped by QTL analysis to mouse chromosome 13
Q34444089A gene essential for de novo methylation and development in Ascobolus reveals a novel type of eukaryotic DNA methyltransferase structure
Q30304392A genetic program for deletion of foreign DNA from the mammalian genome
Q30830058A genome-wide screen for normally methylated human CpG islands that can identify novel imprinted genes
Q42664087A histone H3 methyltransferase controls DNA methylation in Neurospora crassa
Q30596872A new family of genes and pseudogenes potentially expressing testis- and brain-specific leucine zipper proteins in man and mouse
Q61799565Aberrant DNA methylation of M1-macrophage genes in coronary artery disease
Q30446005Activation of the lac repressor in the transgenic mouse
Q35571297Age-related epigenetic changes and the immune system
Q33787464Aging, DNA methylation and cancer
Q34721216An 11bp region with stem formation potential is essential for de novo DNA methylation of the RPS element
Q34606309An analysis of transvection at the yellow locus of Drosophila melanogaster.
Q77406653An inverted repeat triggers cytosine methylation of identical sequences in Arabidopsis
Q36414688Analysis of human peripheral blood T cells and single-cell-derived T cell clones uncovers extensive clonal CpG island methylation heterogeneity throughout the genome
Q52892185Antibiotics induce genome-wide hypermethylation in cultured Nicotiana tabacum plants.
Q41112950Base eversion and shuffling by DNA methyltransferases
Q28396772Biomarkers of lead exposure and DNA methylation within retrotransposons
Q33781581Characterization of novel parent-specific epigenetic modifications upstream of the imprinted mouse H19 gene.
Q28143736Chimeric retroviral helper virus and picornavirus IRES sequence to eliminate DNA methylation for improved retroviral packaging cells
Q35881189Clonal heterogeneity at allelic methylation sites diagnostic for Prader-Willi and Angelman syndromes
Q34469056Cloning and analysis of a novel human putative DNA methyltransferase
Q36844969Colorectal cancer epigenetics: the role of environmental factors and the search for molecular biomarkers
Q33887777Competition--a common motif for the imprinting mechanism?
Q37596549Conserved methylation patterns of human papillomavirus type 16 DNA in asymptomatic infection and cervical neoplasia
Q33693362Context dependent substitution biases vary within the human genome
Q29618264Cytosine methylation and the ecology of intragenomic parasites
Q34385829Cytosine methylation and the unequal developmental potentials of the oocyte and sperm genomes
Q44395792Cytosine methylation mediates sexual conflict
Q77064368Cytosine methylation of repeated sequences in eukaryotes: the role of DNA pairing
Q59506898DNA (cytosine-5) methyltransferase turnover and cellular localization in developing Paracentrotus lividus sea urchin embryo
Q50042001DNA Tumor Virus Regulation of Host DNA Methylation and Its Implications for Immune Evasion and Oncogenesis
Q33870798DNA hypermethylation in tumorigenesis: epigenetics joins genetics
Q40288871DNA hypomethylation and aberrant expression of the human endogenous retrovirus ERVWE1/syncytin-1 in seminomas.
Q44040981DNA hypomethylation and methyltransferase expression in atherosclerotic lesions
Q33651436DNA methylation and DNA methyltransferases.
Q34770507DNA methylation and gene silencing in cancer: which is the guilty party?
Q41566233DNA methylation and imprinting: why bother?
Q37311875DNA methylation and methyl-CpG binding proteins: developmental requirements and function
Q96613313DNA methylation and the core pluripotency network
Q41439642DNA methylation in genomic imprinting
Q35647894DNA methylation topology: potential of a chromatin landmark for epigenetic drug toxicology
Q30993657DNA methylation, methyltransferases, and cancer
Q40388507DNA of Drosophila melanogaster contains 5-methylcytosine
Q33368872De novo methylation and co-suppression induced by a cytoplasmically replicating plant RNA virus
Q51983631Developmental acquisition of genome-wide DNA methylation occurs prior to meiosis in male germ cells.
Q42489639Dietary selenomethionine increases exon-specific DNA methylation of the p53 gene in rat liver and colon mucosa.
Q39596964Differential methylation of Epstein-Barr virus latency promoters facilitates viral persistence in healthy seropositive individuals.
Q37241642Distal cis-regulatory elements are required for tissue-specific expression of enamelin (Enam).
Q36772949Epigenetic changes at the insulin-like growth factor II/H19 locus in developing kidney is an early event in Wilms tumorigenesis.
Q34830485Epigenetic contributors to the discordance of monozygotic twins
Q41566200Epigenetic phenomena in filamentous fungi: useful paradigms or repeat-induced confusion?
Q41152824Epigenetic programming of developmental genome rearrangements in ciliates.
Q22122053Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals
Q35018423Epigenetic regulation of neuronal dendrite and dendritic spine development
Q30498112Epigenetic silencing of engineered L1 retrotransposition events in human embryonic carcinoma cells.
Q35094516Epigenetic variability and the evolution of human cancer.
Q37240566Epigenetics in acute myeloid leukemia
Q50104502Epigenetics: monoallelic expression in the immune system.
Q37300382Existence of Two Distinct Infectious Endogenous Retroviruses in Domestic Cats and Their Different Strategies for Adaptation to Transcriptional Regulation.
Q41439635Formation of methylation patterns in the mammalian genome
Q36241447Gene identification and DNA sequence analysis in the GC-poor 20 megabase region of human chromosome 21
Q33843166Gene silencing as a threat to the success of gene therapy
Q35207524Genetic therapy for HIV/AIDS.
Q34587213Genome differentiation in a species pair of coregonine fishes: an extremely rapid speciation driven by stress-activated retrotransposons mediating extensive ribosomal DNA multiplications.
Q49271010Genomic 5-mC contents in peripheral blood leukocytes were independent protective factors for coronary artery disease with a specific profile in different leukocyte subtypes
Q33541538Genomic imprinting: implications for human disease
Q36225308Host defenses to transposable elements and the evolution of genomic imprinting
Q90189900Human Endogenous Retroviruses (HERVs): Shaping the Innate Immune Response in Cancers
Q42804174Human polyomavirus BKV transcriptionally activates DNA methyltransferase 1 through the pRb/E2F pathway
Q34145956Hypomethylation of an expanded FMR1 allele is not associated with a global DNA methylation defect
Q35118465Hypomethylation: One Side of a Larger Picture
Q42573261Identifying promoter elements necessary for enamelin tissue-specific expression
Q52192434Imprinted expression of the Igf2r gene depends on an intronic CpG island.
Q33852775Imprinted genes as potential genetic and epigenetic toxicologic targets
Q33846679Infection of lymphoid cells by integration-defective human immunodeficiency virus type 1 increases de novo methylation
Q36015063Inhibiting DNA Methylation Causes an Interferon Response in Cancer via dsRNA Including Endogenous Retroviruses
Q45092709Intragenic DNA methylation alters chromatin structure and elongation efficiency in mammalian cells
Q24562316Isolation and characterization of a novel DNA methyltransferase complex linking DNMT3B with components of the mitotic chromosome condensation machinery
Q56814391LagoZ et LagZ, deux gènes appauvris en dinucléotides CpG dérivés du gène LacZ pour l'étude des contrôles épigénétiques
Q35053056Loss of DNMT1o disrupts imprinted X chromosome inactivation and accentuates placental defects in females
Q28594559Loss of the maternal H19 gene induces changes in Igf2 methylation in both cis and trans
Q74312289Mechanisms of genomic imprinting
Q28585211Meiotic catastrophe and retrotransposon reactivation in male germ cells lacking Dnmt3L
Q74657204Mendel stayed home. Genomic imprinting and environmental disease susceptibility, National Institute of Environmental Health Sciences and Duke University Medical Center, Durham, NC, USA, 8-10 October 1998
Q28364163Methylation matters
Q36565952Methylation of genomes and genes at the invertebrate-vertebrate boundary
Q39585366Methylation of transcription factor binding sites in the Epstein-Barr virus latent cycle promoter Wp coincides with promoter down-regulation during virus-induced B-cell transformation
Q40193786Methylation profile in benign, borderline and malignant ovarian tumors.
Q39528996Methylation-mediated proviral silencing is associated with MeCP2 recruitment and localized histone H3 deacetylation
Q33938490Mobile elements and the human genome
Q45733925Molecular analysis of 250 patients with autosomal recessive congenital ichthyosis: evidence for mutation hotspots in ALOXE3 and allelic heterogeneity in ALOX12B.
Q36889966Molecular mechanisms of alcohol-mediated carcinogenesis
Q77471629Murine de novo methyltransferase Dnmt3a demonstrates strand asymmetry and site preference in the methylation of DNA in vitro
Q28114857New 5' regions of the murine and human genes for DNA (cytosine-5)-methyltransferase
Q34093051Operomics: molecular analysis of tissues from DNA to RNA to protein
Q46602155Organization, not duplication, triggers silencing in a complex transgene locus in rice
Q92809345Oxidative DNA Damage Modulates DNA Methylation Pattern in Human Breast Cancer 1 (BRCA1) Gene via the Crosstalk between DNA Polymerase β and a de novo DNA Methyltransferase
Q35671678Paradoxical role of methyl-CpG-binding protein 2 in Rett syndrome.
Q34446607Pharmacological reactivation of inactive genes: the fragile X experience
Q34447606Poly(ADP-ribosyl)ation acts in the DNA demethylation of mouse primordial germ cells also with DNA damage-independent roles
Q34142627Polymorphisms in genes involved in folate metabolism as maternal risk factors for Down syndrome
Q53427610Polymorphisms, genomic imprinting and cancer susceptibility.
Q33538759Position effects and epigenetic silencing of plant transgenes
Q36144782Postnatal development- and age-related changes in DNA-methylation patterns in the human genome
Q73401607Prognostic implications of epigenetic silencing of p15INK4B in acute promyelocytic leukemia
Q34133548Protein transduction: a new tool for the study of cellular ageing and senescence
Q39681923Quantitative analysis of DNA demethylation and transcriptional reactivation of the FMR1 gene in fragile X cells treated with 5-azadeoxycytidine
Q39654059Quantitative comparison of genome-wide DNA methylation mapping technologies.
Q34041209RNA-directed DNA methylation.
Q35800504Retrotransposon-derived elements in the mammalian genome: a potential source of disease
Q25255710Retroviral elements and their hosts: insertional mutagenesis in the mouse germ line
Q33751727Role of DNA methylation in the regulation of cell function
Q58884458S1 SINE retroposons are methylated at symmetrical and non-symmetrical positions in Brassica napus: identification of a preferred target site for asymmetrical methylation
Q40022520Sequence-specific epigenetic effects of the maternal somatic genome on developmental rearrangements of the zygotic genome in Paramecium primaurelia
Q28392514Storage conditions and stability of global DNA methylation in placental tissue
Q30881452Structural organization of the sea urchin DNA (cytosine-5)-methyltransferase gene and characterization of five alternative spliced transcripts.
Q35198972Suppression of crossing-over by DNA methylation in Ascobolus
Q35118484The Development of CpG Island Methylation Biomarkers Using Restriction Landmark Genomic Scanning
Q24318274The IPL gene on chromosome 11p15.5 is imprinted in humans and mice and is similar to TDAG51, implicated in Fas expression and apoptosis
Q57240725The Labyrinthine Ways of Cancer Immunotherapy–T Cell, Tumor Cell Encounter: “How Do I Lose Thee? Let Me Count the Ways”
Q35646482The Role of Epigenetic Change in Autism Spectrum Disorders.
Q39591112The cHS4 insulator increases the probability of retroviral expression at random chromosomal integration sites.
Q35550046The contribution of <i>cis</i>-elements to disease-associated repeat instability: clinical and experimental evidence
Q42418443The effect of DNA CpG methylation on the dynamic conformation of a nucleosome
Q36783169The epigenetic basis of twin discordance in age-related diseases
Q28201533The fragile X gene and its function
Q36273365The potential cocarcinogenic effect of vitamin B12 deficiency
Q48064741The role of DNA methylation during anoxia tolerance in a freshwater turtle (Trachemys scripta elegans).
Q22122375The role of selfish genetic elements in eukaryotic evolution
Q34762192Tracking an embryonic L1 retrotransposition event
Q35207298Transgene integration into the same chromosome location can produce alleles that express at a predictable level, or alleles that are differentially silenced
Q34041294Transgene silencing by the host genome defense: implications for the evolution of epigenetic control mechanisms in plants and vertebrates
Q34041267Transgene silencing in monocots
Q24816254Transgene-induced CCWGG methylation does not alter CG methylation patterning in human kidney cells
Q37742436Transposable elements in the mammalian germline: a comfortable niche or a deadly trap?
Q28143796Transvection and other homology effects
Q28251486Tying it all together: epigenetics, genetics, cell cycle, and cancer
Q32063623Undermethylation associated with retroelement activation and chromosome remodelling in an interspecific mammalian hybrid
Q36150489Versatility of gene therapy vectors through viruses
Q37264298Vitamin C increases viral mimicry induced by 5-aza-2'-deoxycytidine
Q28511971Windows for sex-specific methylation marked by DNA methyltransferase expression profiles in mouse germ cells
Q73013123X-linked mental retardation
Q24297361Zinc-fingers and homeoboxes 1 (ZHX1) binds DNA methyltransferase (DNMT) 3B to enhance DNMT3B-mediated transcriptional repression

Search more.