Characterization of the role of ribonucleases in Salmonella small RNA decay

scientific article published on 3 November 2007

Characterization of the role of ribonucleases in Salmonella small RNA decay is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1093/NAR/GKM916
P932PMC publication ID2190706
P698PubMed publication ID17982174
P5875ResearchGate publication ID5864845

P50authorJörg VogelQ1107809
Inês Jesus SilvaQ42132601
Sandra Cristina ViegasQ42132606
Cecília Maria ArraianoQ42132610
P2093author name stringVerena Pfeiffer
Alexandra Sittka
P2860cites workComplete genome sequence of Salmonella enterica serovar Typhimurium LT2Q22122369
A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coliQ24536169
Hfq-dependent regulation of OmpA synthesis is mediated by an antisense RNA.Q24536474
Identification of CsrC and characterization of its role in epithelial cell invasion in Salmonella enterica serovar TyphimuriumQ24537566
Staphylococcus aureus RNAIII and the endoribonuclease III coordinately regulate spa gene expressionQ24556609
The small RNA, DsrA, is essential for the low temperature expression of RpoS during exponential growth in Escherichia coliQ24562141
Ribonuclease E organizes the protein interactions in the Escherichia coli RNA degradosomeQ24597341
Identification of novel small RNAs using comparative genomics and microarraysQ24601229
RNomics in Escherichia coli detects new sRNA species and indicates parallel transcriptional output in bacteriaQ24641843
SigmaE-dependent small RNAs of Salmonella respond to membrane stress by accelerating global omp mRNA decayQ24669800
Identification and molecular characterization of csrA, a pleiotropic gene from Escherichia coli that affects glycogen biosynthesis, gluconeogenesis, cell size, and surface propertiesQ24669943
Limited role for the DsrA and RprA regulatory RNAs in rpoS regulation in Salmonella entericaQ24679480
Staphylococcus aureus RNAIII coordinately represses the synthesis of virulence factors and the transcription regulator Rot by an antisense mechanismQ24681092
The RNA chaperone Hfq is essential for the virulence of Salmonella typhimuriumQ24683356
A survey of small RNA-encoding genes in Escherichia coliQ24684021
RNase E-dependent processing stabilizes MicX, a Vibrio cholerae sRNAQ24684056
Sigma E controls biogenesis of the antisense RNA MicAQ24684061
Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coliQ24684800
Translational control and target recognition by Escherichia coli small RNAs in vivoQ24684847
Both RNase E and RNase III control the stability of sodB mRNA upon translational inhibition by the small regulatory RNA RyhB.Q24804862
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR productsQ27860842
Global analysis of small RNA and mRNA targets of HfqQ28184898
MicF: an antisense RNA gene involved in response of Escherichia coli to global stress factorsQ28198553
Novel small RNA-encoding genes in the intergenic regions of Escherichia coliQ28205853
The RNA Molecule CsrB Binds to the Global Regulatory Protein CsrA and Antagonizes Its Activity in Escherichia coliQ28242964
Conserved small non-coding RNAs that belong to the sigmaE regulon: role in down-regulation of outer membrane proteinsQ28265898
Surprises at the 3' end of prokaryotic RNAQ28287578
Mechanism of RNA silencing by Hfq-binding small RNAsQ28294833
The excision of intervening sequences from Salmonella 23S ribosomal RNAQ28299072
An antisense RNA inhibits translation by competing with standby ribosomesQ28302101
The bacterial Sm-like protein Hfq: a key player in RNA transactionsQ29620062
mRNA degradation. A tale of poly(A) and multiprotein machines.Q33543980
The ability of Salmonella to enter mammalian cells is affected by bacterial growth stateQ33616743
Function, mechanism and regulation of bacterial ribonucleasesQ33661005
Degradation of mRNA in bacteria: emergence of ubiquitous featuresQ33843441
RNase G (CafA protein) and RNase E are both required for the 5' maturation of 16S ribosomal RNA.Q33890942
The small RNA IstR inhibits synthesis of an SOS-induced toxic peptideQ33984064
Polyadenylation of mRNA in prokaryotesQ34064984
RNase II removes the oligo(A) tails that destabilize the rpsO mRNA of Escherichia coliQ34362942
An important role for RNase R in mRNA decayQ34386953
Polyadenylylation destabilizes the rpsO mRNA of Escherichia coliQ34398938
Bacterial small RNA regulatorsQ34409384
How to find small non-coding RNAs in bacteriaQ34473835
Polyadenylylation helps regulate mRNA decay in Escherichia coli.Q34540898
Loss of Hfq activates the sigmaE-dependent envelope stress response in Salmonella entericaQ34568672
Identification of a novel regulatory protein (CsrD) that targets the global regulatory RNAs CsrB and CsrC for degradation by RNase E.Q35052576
Polynucleotide phosphorylase functions both as a 3' right-arrow 5' exonuclease and a poly(A) polymerase in Escherichia coliQ35358676
The product of the pleiotropic Escherichia coli gene csrA modulates glycogen biosynthesis via effects on mRNA stabilityQ35585353
RNase III enzymes and the initiation of gene silencingQ35675165
Controlling mRNA stability and translation with small, noncoding RNAsQ35737955
An abundance of RNA regulatorsQ36161159
Stabilization of discrete mRNA breakdown products in ams pnp rnb multiple mutants of Escherichia coli K-12Q36218439
Ribonuclease E is a 5'-end-dependent endonucleaseQ38332068
Global regulation by CsrA in Salmonella typhimuriumQ38353868
Aromatic-dependent Salmonella typhimurium are non-virulent and effective as live vaccinesQ39513114
Regulation of Salmonella enterica serovar typhimurium invasion genes by csrA.Q39517248
ppGpp-dependent stationary phase induction of genes on Salmonella pathogenicity island 1.Q40552048
RNase G complementation of rne null mutation identifies functional interrelationships with RNase E in Escherichia coliQ42674243
The role of the S1 domain in exoribonucleolytic activity: substrate specificity and multimerizationQ42952287
Unravelling the biology of macrophage infection by gene expression profiling of intracellular Salmonella entericaQ43533379
Characterization of two novel regulatory genes affecting Salmonella invasion gene expressionQ44872560
RNA degradation in Escherichia coli regulated by 3' adenylation and 5' phosphorylationQ46556739
Reconstitution of the degradation of the mRNA for ribosomal protein S20 with purified enzymesQ47923276
A small, stable RNA induced by oxidative stress: role as a pleiotropic regulator and antimutatorQ48047346
A small RNA downregulates LamB maltoporin in SalmonellaQ50070688
Regulation of Salmonella pathogenicity island 2 genes by independent environmental signalsQ50077992
The fate of the bacterial chromosome in P22-infected cells of Salmonella typhimuriumQ50239416
RNase R affects gene expression in stationary phase: regulation of ompA.Q51242212
Regulation of ompA mRNA stability: the role of a small regulatory RNA in growth phase-dependent control.Q53647064
Cold shock induction of RNase R and its role in the maturation of the quality control mediator SsrA/tmRNA.Q54196216
Unravelling the dynamics of RNA degradation by ribonuclease II and its RNA-bound complex.Q54456221
Substrate recognition and catalysis by the exoribonuclease RNase R.Q54458177
The role of endoribonucleases in the regulation of RNase R.Q54468204
Poly(A)-polymerase I links transcription with mRNA degradation via sigmaS proteolysis.Q54468287
Effect of the increased stability of the penicillin amidase mRNA on the protein expression levels.Q54479808
RNase G of Escherichia coli exhibits only limited functional overlap with its essential homologue, RNase E.Q54521808
Copurification of E. coli RNAase E and PNPase: evidence for a specific association between two enzymes important in RNA processing and degradation.Q54637941
Site-specific endonucleolytic cleavages and the regulation of stability of E. coli ompA mRNA.Q54751287
Homologous and heterologous expression of RNase III from Lactococcus lactisQ60229693
Post-transcriptional control of gene expression: effectors of mRNA decayQ60229720
RNase III cleavages in non-coding leaders of Escherichia coli transcripts control mRNA stability and genetic expressionQ70264902
Analysis of mRNA decay and rRNA processing in Escherichia coli in the absence of RNase E-based degradosome assemblyQ73293355
Sok antisense RNA from plasmid R1 is functionally inactivated by RNase E and polyadenylated by poly(A) polymerase IQ73909065
Regulation of plasmid R1 replication: PcnB and RNase E expedite the decay of the antisense RNA, CopAQ73947851
Determinant role of E. coli RNase III in the decay of both specific and heterologous mRNAsQ74001496
The C-terminal half of RNase E, which organizes the Escherichia coli degradosome, participates in mRNA degradation but not rRNA processing in vivoQ78016733
P433issue22
P304page(s)7651-7664
P577publication date2007-11-03
P1433published inNucleic Acids ResearchQ135122
P1476titleCharacterization of the role of ribonucleases in Salmonella small RNA decay
P478volume35

Reverse relations

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