Disruption of a sugar transporter gene cluster in a hyperthermophilic archaeon using a host-marker system based on antibiotic resistance

scientific article published on 26 January 2007

Disruption of a sugar transporter gene cluster in a hyperthermophilic archaeon using a host-marker system based on antibiotic resistance is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1128/JB.01692-06
P932PMC publication ID1855824
P698PubMed publication ID17259314

P50authorToshiaki FukuiQ40993860
P2093author name stringHaruyuki Atomi
Rie Matsumi
Tadayuki Imanaka
Kenji Manabe
P2860cites workComplete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomesQ22065752
Methanocaldococcus jannaschii uses a modified mevalonate pathway for biosynthesis of isopentenyl diphosphateQ24544228
Homologous gene knockout in the archaeon Halobacterium salinarum with ura3 as a counterselectable markerQ28144638
Cleavage of preflagellins by an aspartic acid signal peptidase is essential for flagellation in the archaeon Methanococcus voltaeQ28184916
Expression vectors for Methanococcus maripaludis: overexpression of acetohydroxyacid synthase and beta-galactosidaseQ30748000
Description of Thermococcus kodakaraensis sp. nov., a well studied hyperthermophilic archaeon previously reported as Pyrococcus sp. KOD1Q30986477
Extremophiles and their adaptation to hot environmentsQ33665542
Conjugational genetic exchange in the hyperthermophilic archaeon Sulfolobus acidocaldarius: intragenic recombination with minimal dependence on marker separationQ33699627
An autonomously replicating transforming vector for Sulfolobus solfataricus.Q33745975
The type II pullulanase of Thermococcus hydrothermalis: molecular characterization of the gene and expression of the catalytic domain.Q33992085
Characterization of intragenic recombination in a hyperthermophilic archaeon via conjugational DNA exchangeQ34011405
Construction of a shuttle vector for, and spheroplast transformation of, the hyperthermophilic archaeon Pyrococcus abyssiQ34165738
An Archaeal Chromosomal Autonomously Replicating Sequence Element from an Extreme Halophile,Halobacteriumsp. Strain NRC-1Q34267329
Shuttle vectors for the archaebacterium Halobacterium volcaniiQ34291257
Characterization of pHV2 from Halobacterium volcanii and its use in demonstrating transformation of an archaebacteriumQ34372391
Exchange of genetic markers at extremely high temperatures in the archaeon Sulfolobus acidocaldariusQ34383124
Industrial relevance of thermophilic ArchaeaQ34463755
Transcriptional and biochemical analysis of starch metabolism in the hyperthermophilic archaeon Pyrococcus furiosus.Q34513617
Sugar transport in (hyper)thermophilic archaea.Q34569663
Targeted disruption of the alpha-amylase gene in the hyperthermophilic archaeon Sulfolobus solfataricusQ34580851
Occurrence and characterization of mercury resistance in the hyperthermophilic archaeon Sulfolobus solfataricus by use of gene disruptionQ34674956
Neomycin resistance as a selectable marker in Methanococcus maripaludisQ35195133
3-Hydroxy-3-methylglutaryl-coenzyme A reductase from Haloferax volcanii: purification, characterization, and expression in Escherichia coliQ35600270
Characterization of pURB500 from the archaeon Methanococcus maripaludis and construction of a shuttle vectorQ35622764
3-hydroxy-3-methylglutaryl coenzyme A reductase of Sulfolobus solfataricus: DNA sequence, phylogeny, expression in Escherichia coli of the hmgA gene, and purification and kinetic characterization of the gene productQ35623949
Insights into ABC transport in archaeaQ35787515
Pullulan degrading enzymes of bacterial originQ35828721
A genetic system for Archaea of the genus Methanosarcina: liposome-mediated transformation and construction of shuttle vectorsQ36052593
Recent progress towards the application of hyperthermophiles and their enzymesQ36089878
Gene replacement in Halobacterium halobium and expression of bacteriorhodopsin mutantsQ36145047
A plasmid vector with a selectable marker for halophilic archaebacteriaQ36157975
Genetic transformation system in the archaebacterium Methanobacterium thermoautotrophicum MarburgQ36188210
Dual coenzyme specificity of Archaeoglobus fulgidus HMG-CoA reductaseQ36282074
Introducing mutations into the single-copy chromosomal 23S rRNA gene of the archaeon Halobacterium halobium by using an rRNA operon-based transformation systemQ37111746
Biochemical evidence for the presence of two alpha-glucoside ABC-transport systems in the hyperthermophilic archaeon Pyrococcus furiosusQ38328600
Identification of two binding domains, one for peptidoglycan and another for a secondary cell wall polymer, on the N-terminal part of the S-layer protein SbsB from Bacillus stearothermophilus PV72/p2.Q39569166
Targeted gene disruption by homologous recombination in the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1.Q39702688
OlpB, a new outer layer protein of Clostridium thermocellum, and binding of its S-layer-like domains to components of the cell envelopeQ39836564
A conserved motif in S-layer proteins is involved in peptidoglycan binding in Thermus thermophilusQ39842310
Domain structure of the Acetogenium kivui surface layer revealed by electron crystallography and sequence analysisQ39930696
Transformation of members of the genus Haloarcula with shuttle vectors based on Halobacterium halobium and Haloferax volcanii plasmid repliconsQ39935105
Transformation of the archaebacterium Halobacterium volcanii with genomic DNA.Q39950216
An expression vector for the archaebacterium Haloferax volcaniiQ39952118
Primary structure and glycosylation of the S-layer protein of Haloferax volcaniiQ39952123
Efficient transfection of the archaebacterium Halobacterium halobiumQ39956187
Genetic evidence identifying the true gluconeogenic fructose-1,6-bisphosphatase in Thermococcus kodakaraensis and other hyperthermophilesQ40000941
Arsenic resistance in Halobacterium sp. strain NRC-1 examined by using an improved gene knockout system.Q40816248
Reverse gyrase is not a prerequisite for hyperthermophilic lifeQ40993699
Disruption of the operon encoding Ehb hydrogenase limits anabolic CO2 assimilation in the archaeon Methanococcus maripaludisQ41875477
Improved and versatile transformation system allowing multiple genetic manipulations of the hyperthermophilic archaeon Thermococcus kodakaraensisQ41913560
Insertional Mutations in the Hydrogenase vhc and frc Operons Encoding Selenium-Free Hydrogenases in Methanococcus voltaeQ42183336
Mevinolin-resistant mutations identify a promoter and the gene for a eukaryote-like 3-hydroxy-3-methylglutaryl-coenzyme A reductase in the archaebacterium Haloferax volcanii.Q42609740
Identification and autonomous replication capability of a chromosomal replication origin from the archaeon Sulfolobus solfataricusQ43016573
Transformation of the extremely thermoacidophilic archaeon Sulfolobus solfataricus via a self-spreading vectorQ43024293
Thermoadaptation of a mesophilic hygromycin B phosphotransferase by directed evolution in hyperthermophilic Archaea: selection of a stable genetic marker for DNA transfer into Sulfolobus solfataricusQ43029058
A new simvastatin (mevinolin)-resistance marker from Haloarcula hispanica and a new Haloferax volcanii strain cured of plasmid pHV2.Q43562824
The primary structure of a procaryotic glycoprotein. Cloning and sequencing of the cell surface glycoprotein gene of halobacteriaQ44651832
Sequence analysis of glutamate dehydrogenase (GDH) from the hyperthermophilic archaeon Pyrococcus sp. KOD1 and comparison of the enzymatic characteristics of native and recombinant GDHsQ48039320
Phosphoenolpyruvate synthase plays an essential role for glycolysis in the modified Embden-Meyerhof pathway in Thermococcus kodakarensis.Q51153255
Homologous recombination of exogenous DNA with the Sulfolobus acidocaldarius genome: properties and uses.Q51332030
Integration of foreign DNA in an intergenic region of the archaeon Methanosarcina mazei without effect on transcription of adjacent genes.Q54580858
Mutants in flaI and flaJ of the archaeon Methanococcus voltae are deficient in flagellum assemblyQ64449468
Isoprenoid synthesis in Halobacterium halobium. Modulation of 3-hydroxy-3-methylglutaryl coenzyme a concentration in response to mevalonate availabilityQ69270861
P433issue7
P407language of work or nameEnglishQ1860
P921main subjectantibiotic resistanceQ380775
P304page(s)2683-2691
P577publication date2007-01-26
P1433published inJournal of BacteriologyQ478419
P1476titleDisruption of a sugar transporter gene cluster in a hyperthermophilic archaeon using a host-marker system based on antibiotic resistance
P478volume189

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cites work (P2860)
Q92106330A Genetic System for Methanocaldococcus jannaschii: An Evolutionary Deeply Rooted Hyperthermophilic Methanarchaeon
Q38298237A global transcriptional regulator in Thermococcus kodakaraensis controls the expression levels of both glycolytic and gluconeogenic enzyme-encoding genes
Q35075051A novel CO-responsive transcriptional regulator and enhanced H2 production by an engineered Thermococcus onnurineus NA1 strain
Q31149419Activation of a chimeric Rpb5/RpoH subunit using library selection
Q36686589Adaptive engineering of a hyperthermophilic archaeon on CO and discovering the underlying mechanism by multi-omics analysis
Q41094519Adaptive evolution of a hyperthermophilic archaeon pinpoints a formate transporter as a critical factor for the growth enhancement on formate
Q48031820An In Vitro Enzyme System for the Production of myo-Inositol from Starch
Q49911408An ornithine ω-aminotransferase required for growth in the absence of exogenous proline in the archaeon Thermococcus kodakarensis.
Q37080464Archaeal RNA polymerase subunits E and F are not required for transcription in vitro, but a Thermococcus kodakarensis mutant lacking subunit F is temperature-sensitive
Q37123660Augmenting the genetic toolbox for Sulfolobus islandicus with a stringent positive selectable marker for agmatine prototrophy
Q54575963Biochemical and genetic characterization of the three metabolic routes in Thermococcus kodakarensis linking glyceraldehyde 3-phosphate and 3-phosphoglycerate.
Q89263055Biotechnology of extremely thermophilic archaea
Q28704512CO-dependent H2 production by genetically engineered Thermococcus onnurineus NA1
Q34408562Carbohydrate metabolism in Archaea: current insights into unusual enzymes and pathways and their regulation.
Q43021364Characterization and gene deletion analysis of four homologues of group 3 pyridine nucleotide disulfide oxidoreductases from Thermococcus kodakarensis
Q42421392Characterization of NADH oxidase/NADPH polysulfide oxidoreductase and its unexpected participation in oxygen sensitivity in an anaerobic hyperthermophilic archaeon
Q43022588Characterization of the frhAGB-encoding hydrogenase from a non-methanogenic hyperthermophilic archaeon
Q38077264CoA biosynthesis in archaea
Q46959660Comparison of CO-dependent H₂ production with strong promoters in Thermococcus onnurineus NA1.
Q35665533Development of a simvastatin selection marker for a hyperthermophilic acidophile, Sulfolobus islandicus
Q50133845Development of an Effective 6-Methylpurine Counterselection Marker for Genetic Manipulation in Thermococcus barophilus
Q35937879Engineering a hyperthermophilic archaeon for temperature-dependent product formation
Q48791808Engineering of a hyperthermophilic archaeon, Thermococcus kodakarensis, that displays chitin-dependent hydrogen production
Q26776556Extremely thermophilic microorganisms as metabolic engineering platforms for production of fuels and industrial chemicals
Q42906271Formate-driven growth coupled with H2 production
Q43031339Gene regulation of two ferredoxin:NADP+ oxidoreductases by the redox-responsive regulator SurR in Thermococcus kodakarensis
Q43028820Genetic analyses of the functions of [NiFe]-hydrogenase maturation endopeptidases in the hyperthermophilic archaeon Thermococcus kodakarensis
Q34580326Genetic engineering of Pyrococcus furiosus to use chitin as a carbon source
Q34401555Genetic manipulations of the hyperthermophilic piezophilic archaeon Thermococcus barophilus
Q39157444Genetic technologies for extremely thermophilic microorganisms of Sulfolobus, the only genetically tractable genus of crenarchaea
Q37839237Genetic tool development underpins recent advances in thermophilic whole-cell biocatalysts.
Q43023266Genetic tools for the piezophilic hyperthermophilic archaeon Pyrococcus yayanosii
Q34304860Genetics Techniques for Thermococcus kodakarensis
Q88101906Hyperthermophilic Archaeon Thermococcus kodakarensis Utilizes a Four-Step Pathway for NAD+ Salvage through Nicotinamide Deamination
Q92133649Identification of Dephospho-Coenzyme A (Dephospho-CoA) Kinase in Thermococcus kodakarensis and Elucidation of the Entire CoA Biosynthesis Pathway in Archaea
Q90028347Induction of a Toxin-Antitoxin Gene Cassette under High Hydrostatic Pressure Enables Markerless Gene Disruption in the Hyperthermophilic Archaeon Pyrococcus yayanosii
Q89949774Integration of large heterologous DNA fragments into the genome of Thermococcus kodakarensis
Q40892807Isolation and Characterization of the First Xylanolytic Hyperthermophilic Euryarchaeon Thermococcus sp. Strain 2319x1 and Its Unusual Multidomain Glycosidase
Q37832278Model organisms for genetics in the domain Archaea: methanogens, halophiles, Thermococcales and Sulfolobales
Q37954955Molecular bases of thermophily in hyperthermophiles
Q28741536Natural competence in the hyperthermophilic archaeon Pyrococcus furiosus facilitates genetic manipulation: construction of markerless deletions of genes encoding the two cytoplasmic hydrogenases
Q42119796One-step sequence- and ligation-independent cloning as a rapid and versatile cloning method for functional genomics studies
Q36291927Overview of the genetic tools in the Archaea
Q34996418Pantoate kinase and phosphopantothenate synthetase, two novel enzymes necessary for CoA biosynthesis in the Archaea
Q50013884Phytoene production utilizing the isoprenoid biosynthesis capacity of Thermococcus kodakarensis
Q36483701Polarity in archaeal operon transcription in Thermococcus kodakaraensis
Q42119311Polysaccharide-degrading thermophiles generated by heterologous gene expression in Geobacillus kaustophilus HTA426.
Q64231042Random mutagenesis of a hyperthermophilic archaeon identified tRNA modifications associated with cellular hyperthermotolerance
Q36017870Recombinogenic properties of Pyrococcus furiosus strain COM1 enable rapid selection of targeted mutants.
Q41413354Screening of a novel strong promoter by RNA sequencing and its application to H2 production in a hyperthermophilic archaeon
Q36672660Shuttle vector expression in Thermococcus kodakaraensis: contributions of cis elements to protein synthesis in a hyperthermophilic archaeon
Q40527205Shuttle vector-based transformation system for Pyrococcus furiosus
Q90043851The TK0271 Protein Activates Transcription of Aromatic Amino Acid Biosynthesis Genes in the Hyperthermophilic Archaeon Thermococcus kodakarensis
Q42120503Thermococcus kodakarensis as a host for gene expression and protein secretion
Q42060490Thermococcus kodakarensis genetics: TK1827-encoded beta-glycosidase, new positive-selection protocol, and targeted and repetitive deletion technology
Q33558049Thermococcus kodakarensis mutants deficient in di-myo-inositol phosphate use aspartate to cope with heat stress
Q30374445Thermus thermophilus as biological model.
Q38877230Transcriptomic profiling and its implications for the H2 production of a non-methanogen deficient in the frhAGB-encoding hydrogenase

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