Thermus thermophilus as biological model.

scientific article

Thermus thermophilus as biological model. is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

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P356DOI10.1007/S00792-009-0226-6
P698PubMed publication ID19156357

P2093author name stringFelipe Cava
Aurelio Hidalgo
José Berenguer
P2860cites workComparative genomics of Thermus thermophilus and Deinococcus radiodurans: divergent routes of adaptation to thermophily and radiation resistanceQ21093605
Toward Automatic Reconstruction of a Highly Resolved Tree of LifeQ22065877
The genome sequence of the extreme thermophile Thermus thermophilusQ22122105
Screening of stable proteins in an extreme thermophile, Thermus thermophilus.Q54611874
Selective cleavage of human DNA: RecA-assisted restriction endonuclease (RARE) cleavage.Q54687606
In vivo directed evolution for thermostabilization of Escherichia coli hygromycin B phosphotransferase and the use of the gene as a selection marker in the host-vector system of Thermus thermophilusQ56899548
Multiple regulatory mechanisms act on the 5' untranslated region of the S-layer gene from Thermus thermophilus HB8Q57835067
S-layer protein from Thermus thermophilus HB8 assembles into porin-like structuresQ58031074
Export of Thermus thermophilus alkaline phosphatase via the twin-arginine translocation pathway in Escherichia coliQ58031180
Structure of a novel glucosamine-containing phosphoglycolipid from Deinococcus radioduransQ69785926
Screening for thermostable mutant of kanamycin nucleotidyltransferase by the use of a transformation system for a thermophile, Bacillus stearothermophilusQ70110078
The structure of the cell envelope of Micrococcus radiodurans as revealed by metal shadowing and decorationQ70169273
The entire population of Thermus thermophilus cells is always competent at any growth phaseQ72274194
F-and V-ATPases in the genus Thermus and related speciesQ77311725
An efficient gene replacement and deletion system for an extreme thermophile, Thermus thermophilusQ77396895
Genomics taken to the extremeQ80038955
The role of the nitrate respiration element of Thermus thermophilus in the control and activity of the denitrification apparatusQ80501476
Rheological and gelation properties of rice starch modified with 4-alpha-glucanotransferaseQ80722109
Isolation and characterization of Thermus bacteriophagesQ81532379
Bacterial evolutionQ24634394
Cell biology and molecular basis of denitrificationQ24643477
Thermus aquaticus gen. n. and sp. n., a nonsporulating extreme thermophileQ24648237
Isolation and characterization of a thermostable RNA ligase 1 from a Thermus scotoductus bacteriophage TS2126 with good single-stranded DNA ligation propertiesQ24793462
Thermus thermophilus genome analysis: benefits and implicationsQ24804623
Structure and mechanism of the aberrant ba3-cytochrome c oxidase from Thermus thermophilusQ27622302
Crystal structure of the ribosome at 5.5 A resolutionQ27630949
The protein capsid of filamentous bacteriophage PH75 from Thermus thermophilusQ27631886
The path of messenger RNA through the ribosomeQ27634165
Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factorsQ27644018
A snapshot of the 30S ribosomal subunit capturing mRNA via the Shine-Dalgarno interactionQ27644037
Structural basis for translation termination on the 70S ribosomeQ27651016
Structure of the 70S ribosome complexed with mRNA and tRNAQ27860602
Structural research on surface layers: a focus on stability, surface layer homology domains, and surface layer-cell wall interactionsQ28137897
The phylogeny of proteobacteria: relationships to other eubacterial phyla and eukaryotesQ28138120
Directed evolution of thermostable kanamycin-resistance gene: a convenient selection marker for Thermus thermophilusQ28146126
Hyperthermophilic enzymes: sources, uses, and molecular mechanisms for thermostabilityQ28203641
Omp85(Tt) from Thermus thermophilus HB27: an ancestral type of the Omp85 protein familyQ30157683
A high-transformation-efficiency cloning vector for Thermus thermophilusQ30805031
Distinctive protein signatures provide molecular markers and evidence for the monophyletic nature of the deinococcus-thermus phylumQ30928322
Characterization of a thermostable alkaline phosphatase from a novel species Thermus yunnanensis sp. nov. and investigation of its cobalt activation at high temperature.Q30992038
The electron transfer complex between cytochrome c552 and the CuA domain of the Thermus thermophilus ba3 oxidase. A combined NMR and computational approachQ31034869
Natranaerobius thermophilus gen. nov., sp. nov., a halophilic, alkalithermophilic bacterium from soda lakes of the Wadi An Natrun, Egypt, and proposal of Natranaerobiaceae fam. nov. and Natranaerobiales ord. nov.Q31135107
Biochemical properties of a high fidelity DNA ligase from Thermus species AK16DQ31933992
Stoichiometry and localization of the stator subunits E and G in Thermus thermophilus H+-ATPase/synthaseQ33308435
Genetic disease detection and DNA amplification using cloned thermostable ligaseQ33513287
Distribution of genes for synthesis of trehalose and Mannosylglycerate in Thermus spp. and direct correlation of these genes with halotoleranceQ33769753
Two nitrate/nitrite transporters are encoded within the mobilizable plasmid for nitrate respiration of Thermus thermophilus HB8.Q33789177
RNA polymerase structure-function: insights into points of transcriptional regulationQ33879763
Isolation and cloning of Omp alpha, a coiled-coil protein spanning the periplasmic space of the ancestral eubacterium Thermotoga maritimaQ33938719
Structure of the hydrophilic domain of respiratory complex I from Thermus thermophilusQ33993467
Molecular analyses of the natural transformation machinery and identification of pilus structures in the extremely thermophilic bacterium Thermus thermophilus strain HB27.Q34100377
Construction of a shuttle vector for, and spheroplast transformation of, the hyperthermophilic archaeon Pyrococcus abyssiQ34165738
Genetic transformation of the extreme thermophile Thermus thermophilus and of other Thermus spp.Q34196779
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Engineering and characterization of a superfolder green fluorescent proteinQ34478574
The Deinococcus-Thermus phylum and the effect of rRNA composition on phylogenetic tree construction.Q34517542
Biotechnologically relevant enzymes from Thermus thermophilusQ34520053
Targeted disruption of the alpha-amylase gene in the hyperthermophilic archaeon Sulfolobus solfataricusQ34580851
A cytochrome c containing nitrate reductase plays a role in electron transport for denitrification in Thermus thermophilus without involvement of the bc respiratory complexQ34596536
Improving the fidelity of Thermus thermophilus DNA ligaseQ34605183
The impact of extremophiles on structural genomics (and vice versa).Q34636738
The bacterial RecA protein and the recombinational DNA repair of stalled replication forksQ34667410
Identification of signature proteins that are distinctive of the Deinococcus-Thermus phylum.Q34724663
Denitrifying genes in bacterial and Archaeal genomesQ34929967
ATP synthases: structure, function and evolution of unique energy converters.Q35123781
Isolation of a thermostable enzyme variant by cloning and selection in a thermophileQ35587822
Plasmid pRQ7 from the hyperthermophilic bacterium Thermotoga species strain RQ7 replicates by the rolling-circle mechanismQ35632571
DNA transport and natural transformation in mesophilic and thermophilic bacteriaQ35787520
Development of plasmid cloning vectors for Thermus thermophilus HB8: expression of a heterologous, plasmid-borne kanamycin nucleotidyltransferase geneQ35950568
Plasmid rolling-circle replication: highlights of two decades of researchQ36057469
Structural features of thermozymesQ36105039
Dodecamer rotor ring defines H+/ATP ratio for ATP synthesis of prokaryotic V-ATPase from Thermus thermophilus.Q36299875
Glycolipids from some extreme thermophilic bacteria belonging to the genus Thermus.Q36311436
The menaquinol-oxidizing cytochrome bc complex from Thermus thermophilus: protein domains and subunitsQ36565222
Recent advances in all-protein chromophore technologyQ36625221
Incidence of Plasmids in Thermus spp. Isolated in Yellowstone National ParkQ36663828
Genome comparison and proteomic characterization of Thermus thermophilus bacteriophages P23-45 and P74-26: siphoviruses with triplex-forming sequences and the longest known tailsQ36737848
Unique polyamines produced by an extreme thermophile, Thermus thermophilusQ36789057
Structural Insights into ribosome recycling factor interactions with the 70S ribosomeQ37266828
Cloning, overexpression, and purification of the recombinant His-tagged SSB protein of Escherichia coli and use in polymerase chain reaction amplificationQ38324458
A four-subunit cytochrome bc(1) complex complements the respiratory chain of Thermus thermophilusQ38326891
Repressible alkaline phosphatase from Thermus aquaticus: associated phosphodiesterase activityQ39148409
Natural transformation in mesophilic and thermophilic bacteria: identification and characterization of novel, closely related competence genes in Acinetobacter sp. strain BD413 and Thermus thermophilus HB27.Q39491667
Identification of the outer membrane porin of Thermus thermophilus HB8: the channel-forming complex has an unusually high molecular mass and an extremely large single-channel conductanceQ39502151
Peptidoglycan fine structure of the radiotolerant bacterium Deinococcus radiodurans SarkQ39547279
Anaerobic growth, a property horizontally transferred by an Hfr-like mechanism among extreme thermophiles.Q39569283
Thermoadaptation of alpha-galactosidase AgaB1 in Thermus thermophilusQ39679418
Targeted gene disruption by homologous recombination in the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1.Q39702688
Structure of peptidoglycan from Thermus thermophilus HB8Q39838126
slpM, a gene coding for an "S-layer-like array" overexpressed in S-layer mutants of Thermus thermophilus HB8Q39839876
A new Thermus-Escherichia coli shuttle integration vector systemQ39846653
Fatty acids are precursors of alkylamines in Deinococcus radioduransQ39939638
Development of Thermus-Escherichia shuttle vectors and their use for expression of the Clostridium thermocellum celA gene in Thermus thermophilusQ39940421
Enzymatic and nucleotide sequence studies of a kanamycin-inactivating enzyme encoded by a plasmid from thermophilic bacilli in comparison with that encoded by plasmid pUB110Q39965872
Enhancement of DNA, cDNA synthesis and fidelity at high temperatures by a dimeric single-stranded DNA-binding proteinQ40240890
Minimizing deletion mutagenesis artifact during Taq DNA polymerase PCR by E. coli SSBQ40533849
Isolation and characterization of a bacteriophage infectious to an extreme thermophile, Thermus thermophilus HB8Q40628260
Specific cleavage of DNA molecules at RecA-mediated triple-strand structureQ40695289
Cytochrome caa3 from the thermophilic bacterium Thermus thermophilus: a member of the heme-copper oxidase superfamily.Q40854854
High-level overproduction of His-tagged Tth DNA polymerase in Thermus thermophilusQ40898593
Thermus thermophilus as a cell factory for the production of a thermophilic Mn-dependent catalase which fails to be synthesized in an active form in Escherichia coli.Q41031380
RecA-mediated Achilles' heel cleavageQ41334286
Biochemical and structural characterisation of membrane-containing icosahedral dsDNA bacteriophages infecting thermophilic Thermus thermophilus.Q41622496
Thermus thermophilus bacteriophage phiYS40 genome and proteomic characterization of virionsQ41891104
A plasmid vector for an extreme thermophile, Thermus thermophilusQ41905948
Temporal regulation of viral transcription during development of Thermus thermophilus bacteriophage phiYS40.Q41910339
Improved and versatile transformation system allowing multiple genetic manipulations of the hyperthermophilic archaeon Thermococcus kodakaraensisQ41913560
Cloning of alpha- and beta-galactosidase genes from an extreme thermophile, Thermus strain T2, and their expression in Thermus thermophilus HB27.Q42030940
Stabilization of nucleic acids by unusual polyamines produced by an extreme thermophile, Thermus thermophilusQ42156498
Multiple-mutation reaction: a method for simultaneous introduction of multiple mutations into the glpK gene of Mycoplasma pneumoniaeQ42237879
Use of a dominant rpsL allele conferring streptomycin dependence for positive and negative selection in Thermus thermophilusQ42413282
Sequence analysis and characterizations of two novel plasmids isolated from Thermus sp. 4C.Q42621560
Nucleotide sequence of the cryptic plasmid pTT8 from Thermus thermophilus HB8 and isolation and characterization of its high-copy-number mutantQ42625778
Identification of a thermophilic plasmid origin and its cloning within a new Thermus-E. coli shuttle vectorQ42664205
Characterization of a rolling-circle replication plasmid from Thermus aquaticus NTU103.Q42684987
Disruption of a sugar transporter gene cluster in a hyperthermophilic archaeon using a host-marker system based on antibiotic resistanceQ42845404
Membrane-associated maturation of the heterotetrameric nitrate reductase of Thermus thermophilusQ42863217
Heterologous gene expression in Thermus thermophilus: beta-galactosidase, dibenzothiophene monooxygenase, PNB carboxy esterase, 2-aminobiphenyl-2,3-diol dioxygenase, and chloramphenicol acetyl transferaseQ43015618
A new type of NADH dehydrogenase specific for nitrate respiration in the extreme thermophile Thermus thermophilusQ43016188
Structure of a major glycolipid from Thermus oshimai NTU-063.Q43016558
Insertional mutagenesis in the extreme thermophilic eubacteria Thermus thermophilus HB8.Q43016848
Engineering a selectable marker for hyperthermophilesQ43016997
Unusual effect of salts on the homodimeric structure of NADH oxidase from Thermus thermophilus in acidic pH.Q43018869
Production of recombinant and tagged proteins in the hyperthermophilic archaeon Sulfolobus solfataricus.Q43019254
Biochemical and regulatory properties of a respiratory island encoded by a conjugative plasmid in the extreme thermophile Thermus thermophilusQ43019350
Compatible Solutes in the Thermophilic Bacteria Rhodothermus marinus and "Thermus thermophilus".Q43019737
beta-Glucosidase as a reporter for the gene expression studies in Thermus thermophilus and constitutive expression of DNA repair genesQ43020559
Identification, subcellular localization and functional interactions of PilMNOWQ and PilA4 involved in transformation competency and pilus biogenesis in the thermophilic bacterium Thermus thermophilus HB27.Q43020764
Characterization of DNA transport in the thermophilic bacterium Thermus thermophilus HB27.Q43021043
Thermophilic DNA ligase. Purification and properties of the enzyme from Thermus thermophilus HB8.Q43021184
Control of the respiratory metabolism of Thermus thermophilus by the nitrate respiration conjugative element NCE.Q43022554
Sequence of the DNA ligase-encoding gene from Thermus scotoductus and conserved motifs in DNA ligasesQ43022619
Electron transfer kinetics of soluble fragments indicate a direct interaction between complex III and the caa3 oxidase in Thermus thermophilusQ43023107
Isolation of prokaryotic V0V1-ATPase from a thermophilic eubacterium Thermus thermophilus.Q43023109
Mannosylglycerate is essential for osmotic adjustment in Thermus thermophilus strains HB27 and RQ-1.Q43023145
The proton-translocating NADH-quinone oxidoreductase (NDH-1) of thermophilic bacterium Thermus thermophilus HB-8. Complete DNA sequence of the gene cluster and thermostable properties of the expressed NQO2 subunitQ43024439
The pyruvate dehydrogenase complex from thermophilic organisms: thermal stability and re-association from the enzyme componentsQ43025399
Shuttle vectors for hyperthermophilic archaeaQ43025518
V-Type H+-ATPase/synthase from a thermophilic eubacterium, Thermus thermophilus. Subunit structure and operonQ43027491
Selection of stabilized 3-isopropylmalate dehydrogenase of Saccharomyces cerevisiae using the host-vector system of an extreme thermophile, Thermus thermophilus.Q43028615
Liposome-mediated DNA uptake and transient expression in ThermotogaQ43028633
Thermoadaptation of a mesophilic hygromycin B phosphotransferase by directed evolution in hyperthermophilic Archaea: selection of a stable genetic marker for DNA transfer into Sulfolobus solfataricusQ43029058
Novel thermostable ssDNA-binding proteins from Thermus thermophilus and T. aquaticus-expression and purification.Q43031282
Development of a genetic system for hyperthermophilic Archaea: expression of a moderate thermophilic bacterial alcohol dehydrogenase gene in Sulfolobus solfataricusQ43032452
Development of a gene expression vector for Thermus thermophilus based on the promoter of the respiratory nitrate reductaseQ43032463
Inducible and constitutive expression using new plasmid and integrative expression vectors for Thermus sp.Q43644944
Purification and characterization of a NADH oxidase from the thermophile Thermus thermophilus HB8Q43807123
A cytochrome c encoded by the nar operon is required for the synthesis of active respiratory nitrate reductase in Thermus thermophilusQ44068367
Electrochemical, FT-IR and UV/VIS spectroscopic properties of the caa3 oxidase from T. thermophilusQ44158404
A reporter gene system for the hyperthermophilic archaeon Sulfolobus solfataricus based on a selectable and integrative shuttle vectorQ44465855
Binding to pyruvylated compounds as an ancestral mechanism to anchor the outer envelope in primitive bacteriaQ44854356
Purification and characterization of two types of NADH-quinone reductase from Thermus thermophilus HB-8.Q45947303
An activity-independent selection system of thermostable protein variants.Q46973826
Nucleotide sequence of the gene for alkaline phosphatase of Thermus caldophilus GK24 and characteristics of the deduced primary structure of the enzymeQ47912739
Isolation and characterization of pyrimidine auxotrophs, and molecular cloning of the pyrE gene from the hyperthermophilic archaeon Pyrococcus abyssiQ47922036
Top DNA polymerase from Thermus thermophilus HB27: gene cloning, sequence determination, and physicochemical properties.Q47932832
Characterization of a plasmid replicative origin from an extreme thermophileQ48029788
Surface proteins and a novel transcription factor regulate the expression of the S-layer gene in Thermus thermophilus HB8.Q48051694
Screening and analysis of DNA fragments that show promoter activities in Thermus thermophilusQ48073925
Expression and use of superfolder green fluorescent protein at high temperatures in vivo: a tool to study extreme thermophile biologyQ50650522
Modulation of substrate preference of thermus maltogenic amylase by mutation of the residues at the interface of a dimer.Q53567622
Stable triple-stranded DNA formation and its application to the SNP detection.Q53720239
Characterization of the ColE2-like replicon of plasmid pTT8 from Thermus thermophilus.Q54448956
P433issue2
P921main subjectThermus thermophilusQ139470
P304page(s)213-231
P577publication date2009-01-21
P1433published inExtremophilesQ15766992
P1476titleThermus thermophilus as biological model.
P478volume13

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